PRGDB00049569 (disease resisatnce_like protein)

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disease resisatnce_like protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 24459856 (AJ298892)
Gene Class N
Domain Type NBS
Gene Species Coffea canephora

Comment?

Coffea canephora partial ORF for disease resisatnce_like protein, clone NBS CrgaG2.

DNA Sequence

GGGGGTGGGGAAGACTACATTGGCGGACCACATCCATGATCACCTCCTTAAGAATACTCAATCCAAGGTTTATTGGATTTCTGTCTCTCAAGATTTTAGCATCAAAAAGCTGCAAGGTGACATTGCTAAACGCTTAAAGCTTAATCTGTCAGACGTGGATGATGAAAAAGTAAGGGCACGTAAGTTGGGTGACACATTCGAGAAAATGGAGGAAATGGTAGTGCTCATATTGGATGATGTTTGGGAATACTTTTGTTTATACCGCTTAGGGATTGGTGCAAGAAATTGCAGACTGATTTTGACTACACGCTCATTACAAGTGTGCAACCAGATGCGATGCCATCCTTTTGAGTTGAAAACTTTGGACACAGAGGAAGCTTGGGGTTTGTTCGAGCGTACACTTGGCAGCGAGACCGTGCTTGATGGAGATTTGGAACGTATTGCCAAGTCCATCACGGAAAGGTGTGGTGGTTTGCCCTTGGCATT


Protein sequences

Name Description Sequence
disease resisatnce_like protein disease resisatnce_like protein [Coffea canephora].

GVGKTTLADHIHDHLLKNTQSKVYWISVSQDFSIKKLQGDIAKRLKLNLSDVDDEKVRARKLGDTFEKMEEMVVLILDDVWEYFCLYRLGIGARNCRLILTTRSLQVCNQMRCHPFELKTLDTEEAWGLFERTLGSETVLDGDLERIAKSITERCGGLPLA


Domains

Domain Start-End Description Sequence

HMMPfam: PF00931
IPR002182
1-161 NB-ARC,NBS
NB-ARC

GVGKTTLADHIHDHLLKNTQSKVYWISVSQDFSIKKLQGDIAKRLKLNLSDVDDEKVRARKLGDTFEKMEEMVVLILDDVWEYFCLYRLGIGARNCRLILTTRSLQVCNQMRCHPFELKTLDTEEAWGLFERTLGSETVLDGDLERIAKSITERCGGLPLA

Gene3D: G3DSA:3.40.50.300
1-81 G3DSA:3.40.50.300

GVGKTTLADHIHDHLLKNTQSKVYWISVSQDFSIKKLQGDIAKRLKLNLSDVDDEKVRARKLGDTFEKMEEMVVLILDDVW

superfamily: SSF52540
1-161 SSF52540

GVGKTTLADHIHDHLLKNTQSKVYWISVSQDFSIKKLQGDIAKRLKLNLSDVDDEKVRARKLGDTFEKMEEMVVLILDDVWEYFCLYRLGIGARNCRLILTTRSLQVCNQMRCHPFELKTLDTEEAWGLFERTLGSETVLDGDLERIAKSITERCGGLPLA


List of References

S Noir, M C Combes, F Anthony, P Lashermes
Origin, diversity and evolution of NBS-type disease-resistance gene homologues in coffee trees (Coffea L.).
Mol. Genet. Genomics: 2001, 265(4);654-62
PubMed:11459185 WorldCat.org (P p)





List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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