PRGDB00049570 (disease resistance-like protein)
| disease resistance-like protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 24459854 (AJ298891) |
| Gene Class | N |
| Domain Type | NBS |
| Gene Species | Coffea arabica |
DNA Sequence
GGGGGTGGGAAGACGACACTGGCGAGGCACATTGAGTACCATCTTTTAGAAAAGAACAATTATCGGGTGCTTTGGGTTACAGAATCTCAAGATTTCAGTATCACCAATTTGCAGGATAAGATTGCCAATGTCTTAGGCATTACTCTATCAAGTAGGGACGAGGAAGACGCCAGGGCAAGAATATTGCGTGAAGCATTCAGGAAAATGCTGAAATTAATAGTACTCATATTGGATGATGTTTGGGAAGAATTTTGTTTAGACAGGGTAGGGATTCCTCTTCATCCAAACAAGTGCAGATTGATTTTGACTACACGCTCACTGGAAGTGTGCAACAGGATACAATGTCAAAGAAAGTTTGATTTGCAAACTTTGGACACGGACGAAGCTTGGGATTTGTTCAAGTATAAACTTGGCAGAGAGCCCTTGCTTCAAGGAGATTTGGAAAGTATTGCCAAGTCCATTGTGGAAGAGTGTGATGGGTTGCCCTTGGCCTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance-like protein | disease resistance-like protein [Coffea arabica]. | GGGKTTLARHIEYHLLEKNNYRVLWVTESQDFSITNLQDKIANVLGITLSSRDEEDARARILREAFRKMLKLIVLILDDVWEEFCLDRVGIPLHPNKCRLILTTRSLEVCNRIQCQRKFDLQTLDTDEAWDLFKYKLGREPLLQGDLESIAKSIVEECDGLPLA |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-164 | NB-ARC,NBS NB-ARC
|
GGGKTTLARHIEYHLLEKNNYRVLWVTESQDFSITNLQDKIANVLGITLSSRDEEDARARILREAFRKMLKLIVLILDDVWEEFCLDRVGIPLHPNKCRLILTTRSLEVCNRIQCQRKFDLQTLDTDEAWDLFKYKLGREPLLQGDLESIAKSIVEECDGLPLA |
| superfamily: SSF52540 | 1-164 | SSF52540 | GGGKTTLARHIEYHLLEKNNYRVLWVTESQDFSITNLQDKIANVLGITLSSRDEEDARARILREAFRKMLKLIVLILDDVWEEFCLDRVGIPLHPNKCRLILTTRSLEVCNRIQCQRKFDLQTLDTDEAWDLFKYKLGREPLLQGDLESIAKSIVEECDGLPLA |
| Gene3D: G3DSA:3.40.50.300 | 1-69 | G3DSA:3.40.50.300 | GGGKTTLARHIEYHLLEKNNYRVLWVTESQDFSITNLQDKIANVLGITLSSRDEEDARARILREAFRKM |
| Gene3D: G3DSA:3.40.50.300 | 102-126 | G3DSA:3.40.50.300 | LTTRSLEVCNRIQCQRKFDLQTLDT |
List of References
S Noir, M C Combes, F Anthony, P Lashermes
Origin, diversity and evolution of NBS-type disease-resistance gene homologues in coffee trees (Coffea L.).
Mol. Genet. Genomics: 2001, 265(4);654-62
PubMed:11459185
WorldCat.org
(P p)
List of Contributions
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