PRGDB00049669 (Hcr2-5D)

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Hcr2-5D
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 3894392 (AF053998)
Gene Class Unknown
Domain Type LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Solanum lycopersicum var. cerasiforme

Comment?

Lycopersicon esculentum Hcr2-5D (Hcr2-5D) gene, complete cds.

DNA Sequence

ATGATGATGGTTACTAGCAAAGTATTCTCTTCACTTCAGTTTTTCACTGTTTTCTACCTCTTTACAGTTGCATTTGCTTCGACTGAGGAGGCAACTGCCCTCTTGAAATGGAAAGCAACTTTCAAGAACCAGAATAATTCCTTTTTGGCTTCATGGACGACAAGTTCTAATGCATGCAAGGACTGGTATGGAGTTGTATGCTTGAATGGTAGGGTAAACACGTTGAATATTACAAATGCCAGTGTCATTGGTACACTTTATGCTTTTCCATTTTCATCCCTCCCTTTTCTCGAGAATCTTGATCTTAGCAACAACAATATCTCTGGTACCATTCCACCTGAGATTGGTAATCTCACAAATCTTGTCTATCTTGACTTGAACACCAATCAGATTTCAGGAACAATTCCACCACAAATCGGTTCACTAGCCAAGCTTCAGATCATCCGCATATTTAACAATCATTTAAATGGCTTTATTCCTGAAGAAATAGGTTACCTAAGGTCTCTTACTAAGCTATCTTTGGGTATCAACTTTCTTAGTGGTTCTATTCCTGCTTCATTGGGCAATATGACCAACTTGTCTTTTTTATTTCTTTATGAAAATCAGCTTTCTGGCTTTATTCCTGAAGAAATAGGTTACCTAAGGTCTCTTACTAAGCTATCTTTGGATATCAACTTTCTTAGTGGTTCCATTCCTGCTTCATTGGGGAATCTGAACAACTTGTCTTTTTTGTATCTTTACAATAATCAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTCAGGTCACTTACTAAGCTATCTTTGGGTATCAACTTTCTTAGTGGTTCCATTCCTGCTTCATTGGGGAATCTAAACAACTTGTCTAGGTTGGATCTTTACAATAATAAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTAAGGTCTCTTACTTACCTAGATTTGGGTGAGAATGCTCTTAATGGCTCTATTCCTGCTTCATTGGGGAATCTAAACAACTTGTTTATGTTGTATCTTTACAATAATCAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTAAGGTCTCTTACTTACCTAGATTTGGGTGAGAATGCTCTTAATGGCTCTATTCCTGCTTCATTGGGGAATCTAAACAACTTGTCTAGGTTGGATCTTTACAATAATAAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTAAGGTCTCTTACTTACCTAGATTTGGGTGAGAATGCTCTTAATGGCTCTATTCCTGCTTCATTGGGGAATCTGAACAACTTGTTTATGTTGTATCTTTACAATAATCAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTGAGTTCTCTTACTGAACTATATTTGGGTAATAACTCTCTTAATGGCTCTATTCCTGCTTCATTGGGGAATCTGAACAACTTGTTTATGTTGTATCTTTACAATAATCAGCTTTCTGGCTCTATTCCTGAAGAAATAGGTTACCTGAGTTCTCTTACTGAACTATTTTTGGGTAATAACTCTCTTAATGGCTCTATTCCTGCTTCATTGGGGAATCTAAACAACTTGTCTAGGTTGTATCTTTACAATAATCAGCTTTCTGGCTCTATTCCTGCTTCATTTGGCAATATGAGAAATCTGCAAACTCTGTTTCTCAGTGATAACGATCTCATTGGGGAAATTCCTTCATTTGTGTGCAATTTGACATCACTGGAAGTGTTGTATATGTCGAGAAACAATTTGAAGGGAAAAGTTCCGCAATGTTTGGGTAATATCAGTGACCTTCACATTTTGTCGATGTCATCTAATAGTTTCAGAGGAGAGCTCCCTTCATCTATTTCCAATTTAACATCACTAAAAATACTTGATTTTGGCAGAAACAATCTGGAGGGAGCAATACCACAATTTTTTGGCAATATTAGTAGCCTCCAGGTTTTTGATATGCAGAATAACAAACTTTCTGGGACTCTTCCAACAAATTTTAGCATTGGATGTTCACTGATAAGTCTCAACTTGCATGGCAATGAACTAGCAGATGAAATCCCTCGGTCTTTGGACAATTGCAAAAAGCTGCAAGTTCTTGATTTAGGAGACAATCAACTCAACGACACATTTCCCATGTGGTTGGGAACTTTGCCAGAGCTGAGAGTTTTAAGGTTGACATCGAATAAATTGCATGGACCTATAAGATCATCAGGGGCTGAAATCATGTTTCCTGATCTCCGAATCATAGATCTCTCTCGCAATGCATTCTCGCAAGACTTACCAACGAGTCTATTTGAACATTTGAAAGGGATGAGGACAGTTGATAAAACAATGGAGGAACCAAGTTATGAAAGCTATTACGATGACTCGGTGGTAGTTGTGACAAAGGGATTGGAGCTTGAAATTGTGAGAATTCTGTCTTTGTACACAATTATCGATCTTTCAAGCAACAAATTTGAAGGACATATTCCTTCTGTCCTGGGAGATCTCATTGCGATCCGTGTACTTAATGTATCTCATAATGCATTGCAAGGCTATATACCATCATCACTTGGAAGTTTATCTATACTGGAATCACTAGACCTTTCGTTTAACCAACTTTCGGGAGAGATACCACAACAACTTGCTTCTCTTACGTTTCTTGAAGTCTTAAATCTCTCCCACAATTATCTCCAAGGATGCATCCCTCAAGGACCTCAATTCCGTACCTTTGAGAGCAATTCATATGAAGGTAATGATGGATTACGTGGATATCCAGTTTCAAAAGGTTGTGGCAAAGATCCTGTGTCAGAGAAAAACTATACAGTGTCTGCGCTAGAAGATCAAGAAAGCAATTCTGAATTTTTCAATGATTTTTGGAAAGCAGCTCTGATGGGCTATGGAAGTGGACTGTGTATTGGCATATCCATAATATATATCTTGATCTCGACTGGAAATCTAAGATGGCTTGCAAGAATCATTGAAGAACTGGAACACAAAATTATCGTGCAAAGGAGAAAGAAGCAGCGAGGTCAAAGAAATTACAGAAGAAGAAATAATCGCTTCTAG


Protein sequences

Name Description Sequence
Hcr2-5D Hcr2-5D [Lycopersicon esculentum].

MMMVTSKVFSSLQFFTVFYLFTVAFASTEEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVCLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQGPQFRTFESNSYEGNDGLRGYPVSKGCGKDPVSEKNYTVSALEDQESNSEFFNDFWKAALMGYGSGLCIGISIIYILISTGNLRWLARIIEELEHKIIVQRRKKQRGQRNYRRRNNRF


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-894 PTHR24420,FAMILY NOT NAMED

MMMVTSKVFSSLQFFTVFYLFTVAFASTEEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVCLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQG

HMMPanther: PTHR24420:SF474
1-894 PTHR24420:SF474,SUBFAMILY NOT NAMED

MMMVTSKVFSSLQFFTVFYLFTVAFASTEEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVCLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQG

superfamily: SSF52058
24-301 SSF52058,LRR

AFASTEEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVCLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSG

HMMPfam: PF08263
IPR013210
29-67 LRRNT_2
Leucine-rich repeat-containing N-terminal, type 2

EEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVC

Gene3D: G3DSA:3.80.10.10
29-298 G3DSA:3.80.10.10

EEATALLKWKATFKNQNNSFLASWTTSSNACKDWYGVVCLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNK

ProfileScan: PS51450
IPR001611
96-118 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

FLENLDLSNNNISGTIPPEIGNL

HMMPfam: PF12799
97-132 LRR_4,Leucine Rich repeats (2 copies)

LENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQIS

ProfileScan: PS51450
IPR001611
120-142 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLVYLDLNTNQISGTIPPQIGSL

ProfileScan: PS51450
IPR001611
168-190 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTKLSLGINFLSGSIPASLGNM

ProfileScan: PS51450
IPR001611
192-214 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLSFLFLYENQLSGFIPEEIGYL

ProfileScan: PS51450
IPR001611
216-239 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTKLSLDINFLSGSIPASLGNLN

HMMPfam: PF00560
IPR001611
240-260 LRR_1
Leucine-rich repeat

NLSFLYLYNNQLSGSIPEEIG

ProfileScan: PS51450
IPR001611
240-262 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLSFLYLYNNQLSGSIPEEIGYL

superfamily: SSF52047
254-564 SSF52047,LRR

SIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLI

ProfileScan: PS51450
IPR001611
264-287 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTKLSLGINFLSGSIPASLGNLN

HMMPfam: PF00560
IPR001611
288-308 LRR_1
Leucine-rich repeat

NLSRLDLYNNKLSGSIPEEIG

ProfileScan: PS51450
IPR001611
288-310 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLSRLDLYNNKLSGSIPEEIGYL

Gene3D: G3DSA:3.80.10.10
299-498 G3DSA:3.80.10.10

LSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEE

HMMPfam: PF12799
312-348 LRR_4,Leucine Rich repeats (2 copies)

SLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLS

ProfileScan: PS51450
IPR001611
312-335 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTYLDLGENALNGSIPASLGNLN

ProfileScan: PS51450
IPR001611
336-358 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLFMLYLYNNQLSGSIPEEIGYL

HMMPfam: PF12799
360-396 LRR_4,Leucine Rich repeats (2 copies)

SLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLS

ProfileScan: PS51450
IPR001611
360-383 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTYLDLGENALNGSIPASLGNLN

ProfileScan: PS51450
IPR001611
384-406 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLSRLDLYNNKLSGSIPEEIGYL

HMMPfam: PF12799
408-444 LRR_4,Leucine Rich repeats (2 copies)

SLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLS

ProfileScan: PS51450
IPR001611
408-431 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTYLDLGENALNGSIPASLGNLN

ProfileScan: PS51450
IPR001611
432-454 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLFMLYLYNNQLSGSIPEEIGYL

ProfileScan: PS51450
IPR001611
456-479 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTELYLGNNSLNGSIPASLGNLN

HMMPfam: PF12799
456-492 LRR_4,Leucine Rich repeats (2 copies)

SLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLS

superfamily: SSF52058
469-760 SSF52058,LRR

GSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQD

ProfileScan: PS51450
IPR001611
480-502 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLFMLYLYNNQLSGSIPEEIGYL

Gene3D: G3DSA:3.80.10.10
499-679 G3DSA:3.80.10.10

IGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLH

HMMPfam: PF13855
503-563 LRR_8,Leucine rich repeat

SSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDL

ProfileScan: PS51450
IPR001611
504-527 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLTELFLGNNSLNGSIPASLGNLN

ProfileScan: PS51450
IPR001611
528-550 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLSRLYLYNNQLSGSIPASFGNM

ProfileScan: PS51450
IPR001611
552-574 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQTLFLSDNDLIGEIPSFVCNL

ProfileScan: PS51450
IPR001611
576-598 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLEVLYMSRNNLKGKVPQCLGNI

HMMPfam: PF13855
601-659 LRR_8,Leucine rich repeat

LHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKL

ProfileScan: PS51450
IPR001611
624-646 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKILDFGRNNLEGAIPQFFGNI

HMMPfam: PF13855
672-731 LRR_8,Leucine rich repeat

SLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKL

ProfileScan: PS51450
IPR001611
672-695 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLISLNLHGNELADEIPRSLDNCK

Gene3D: G3DSA:3.80.10.10
680-774 G3DSA:3.80.10.10

GNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRT

superfamily: SSF52058
689-920 SSF52058,LRR

RSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQGPQFRTFESNSYEGNDGLRGYP

ProfileScan: PS51450
IPR001611
696-719 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLQVLDLGDNQLNDTFPMWLGTLP

ProfileScan: PS51450
IPR001611
746-768 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

DLRIIDLSRNAFSQDLPTSLFEH

HMMPfam: PF00560
IPR001611
747-769 LRR_1
Leucine-rich repeat

LRIIDLSRNAFSQDLPTSLFEHL

Gene3D: G3DSA:3.80.10.10
813-920 G3DSA:3.80.10.10

IDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQGPQFRTFESNSYEGNDGLRGYP

HMMPfam: PF00560
IPR001611
834-855 LRR_1
Leucine-rich repeat

IRVLNVSHNALQGYIPSSLGSL

ProfileScan: PS51450
IPR001611
857-880 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

ILESLDLSFNQLSGEIPQQLASLT

HMMPfam: PF12799
858-893 LRR_4,Leucine Rich repeats (2 copies)

LESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQ

FPrintScan: PR00019
858-871 LEURICHRPT,Leucine-rich repeat signature

LESLDLSFNQLSGE

FPrintScan: PR00019
879-892 LEURICHRPT,Leucine-rich repeat signature

LTFLEVLNLSHNYL

ProfileScan: PS51450
IPR001611
881-903 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

FLEVLNLSHNYLQGCIPQGPQFR


List of References

M S Dixon, K Hatzixanthis, D A Jones, K Harrison, J D Jones
The tomato Cf-5 disease resistance gene and six homologs show pronounced allelic variation in leucine-rich repeat copy number.
Plant Cell: 1998, 10(11);1915-25
PubMed:9811798 WorldCat.org (P p)





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Analyses

Blast

Blast matches against Reference R-Genes. Show


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