PRGDB00049793 (TRGA-8)

TRGA-8
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	145572871 (EF093501)
Gene Class	NL
Domain Type	NBS, LRR
Gene Species	Nicotiana debneyi
	Comment?

Nicotiana debneyi TRGA-8 gene, partial cds.

DNA Sequence

GAAGGTGCTTGCTTTGTTGCAAATATTAAAGAAAATCAAGCTAAACAAGGATTGCTGTCTCTGCAAAAGACTCTGCTTTCTAAGGTGCTGACCATTGAATCTGTGAATCTTGCTGATGAATATGGTGGAATTGATATAATAAGAAGAAGGCTTGGCTTTAAGAAGGTTCTAGTGGTTCTTGATGATGTGGATCACCAAGACCAGTTGGATGGGCTAGCTGGAGCTCATGATTGGTTTGGTAAATATAGTAGAGTTATTATAACAGCGAGGGACGAGCACTTGCTTTTGAACTGTGATGAC

Protein sequences

Name	Description	Sequence
TRGA-8	TRGA-8 [Nicotiana debneyi].	EGACFVANIKENQAKQGLLSLQKTLLSKVLTIESVNLADEYGGIDIIRRRLGFKKVLVVLDDVDHQDQLDGLAGAHDWFGKYSRVIITARDEHLLLNCDD

Domains

Domain	Start-End	Description	Sequence
HMMPfam: PF00931 IPR002182	3-97	NB-ARC,NBS NB-ARC	ACFVANIKENQAKQGLLSLQKTLLSKVLTIESVNLADEYGGIDIIRRRLGFKKVLVVLDDVDHQDQLDGLAGAHDWFGKYSRVIITARDEHLLLN
HMMPanther: PTHR11017	4-88	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	CFVANIKENQAKQGLLSLQKTLLSKVLTIESVNLADEYGGIDIIRRRLGFKKVLVVLDDVDHQDQLDGLAGAHDWFGKYSRVIIT
HMMPanther: PTHR11017:SF20	4-88	PTHR11017:SF20,SUBFAMILY NOT NAMED	CFVANIKENQAKQGLLSLQKTLLSKVLTIESVNLADEYGGIDIIRRRLGFKKVLVVLDDVDHQDQLDGLAGAHDWFGKYSRVIIT

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Analyses

Blast

Blast matches against Reference R-Genes. Show