PRGDB00049813 (EDS1)

From PRG Wiki
Jump to: navigation, search
EDS1
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 79314598 (NM_001035752)
Gene Class Unknown
Domain Type
Gene Species Arabidopsis thaliana

Comment?

Arabidopsis thaliana EDS1 (ENHANCED DISEASE SUSCEPTIBILITY 1); signal transducer/ triacylglycerol lipase (EDS1) mRNA, complete cds.

DNA Sequence

ATGGCTGTGAGGAGTAGAAAACAGATAGTGTTCACAGGACATTCCTCAGGAGGTGCAACTGCAATCTTAGCAACAGTTTGGTATTTGGAGAAATACTTCATACGCAATCCAAATGTTTACCTTGAGCCTCGTTGTGTGACATTTGGAGCTCCTTTGGTTGGTGACTCTATCTTCAGTCACGCACTTGGGAGAGAAAAATGGAGCCGGTTCTTTGTGAACTTTGTCTCAAGATTCGATATTGTCCCTCGGATTATGCTTGCTCGAAAGGCGTCTGTAGAGGAAACTTTGCCTCATGTTCTTGCCCAATTGGATCCCAGAAAGTCTTCCGTCCAAGAGAGTGAACAGAGAATAACAGAGTTTTACACAAGGGTGATGCGAGACACATCAACTGTTGCAAACCAAGCTGTTTGTGAATTGACTGGAAGCGCAGAGGCGTTTTTAGAGACCCTTTCTAGTTTCCTTGAGCTAAGTCCTTATAGACCCGCCGGTACTTTTGTTTTCTCTACAGAGAAGAGATTGGTTGCAGTGAACAACTCGGACGCCATTCTTCAAATGCTGTTTTACACTTCTCAAGCCAGCGATGAACAAGAATGGTCTCTAATTCCATTTCGAAGTATCAGAGATCATCATAGCTATGAGGAACTGGTACAGTCGATGGGAAAGAAGTTGTTTAATCATTTGGATGGAGAAAACTCAATAGAGTCTACGCTCAATGACCTTGGAGTGAGCACAAGAGGCAGACAGTACGTTCAAGCTGCATTAGAGGAAGAGAAGAAACGAGTAGAGAATCAGAAGAAGATTATTCAGGTGATCGAGCAAGAGAGGTTTTTAAAGAAACTAGCATGGATAGAAGATGAATACAAGCCAAAGTGTCAAGCCCATAAAAATGGGTATTATGATTCCTTCAAAGTTTCAAATGAAGAGAATGACTTCAAAGCAAACGTCAAGAGAGCTGAGTTAGCCGGTGTTTTTGACGAGGTGCTTGGTTTAATGAAGAAATGTCAACTTCCAGATGAGTTCGAAGGGGACATAGATTGGATCAAGTTAGCAACTCGATACCGCAGATTAGTTGAGCCTCTTGATATTGCAAACTACCATCGACATTTAAAGAACGAAGACACAGGGCCGTACATGAAAAGAGGAAGACCAACCCGCTACATATATGCTCAGAGAGGCTACGAACATTATATACTGAAGCCAAACGGAATGATTGCAGAAGATGTATTTTGGAACAAGGTAAATGGTCTTAACTTAGGGTTACAGCTAGAAGAAATTCAAGAGACTCTAAAGAATTCGGGATCCGAGTGCGGATCATGCTTTTGGGCTGAGGTTGAAGAACTCAAAGGAAAGCCATACGAGGAAGTTGAGGTAAGAGTTAAGACATTAGAAGGGATGCTTGGAGAATGGATCACAGACGGGGAGGTAGATGATAAGGAAATATTTCTGGAGGGTTCAACGTTTAGAAAGTGGTGGATTACGCTTCCCAAAAATCACAAATCGCATTCTCCTCTGCGAGACTATATGATGGATGAAATAACAGATACCTGA


Protein sequences

Name Description Sequence
EDS1 (ENHANCED DISEASE SUSCEPTIBILITY 1); signal transducer/ triacylglycerol lipase EDS1 (ENHANCED DISEASE SUSCEPTIBILITY 1); signal transducer/ triacylglycerol lipase [Arabidopsis thaliana].

MAVRSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVSRFDIVPRIMLARKASVEETLPHVLAQLDPRKSSVQESEQRITEFYTRVMRDTSTVANQAVCELTGSAEAFLETLSSFLELSPYRPAGTFVFSTEKRLVAVNNSDAILQMLFYTSQASDEQEWSLIPFRSIRDHHSYEELVQSMGKKLFNHLDGENSIESTLNDLGVSTRGRQYVQAALEEEKKRVENQKKIIQVIEQERFLKKLAWIEDEYKPKCQAHKNGYYDSFKVSNEENDFKANVKRAELAGVFDEVLGLMKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHYILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKGKPYEEVEVRVKTLEGMLGEWITDGEVDDKEIFLEGSTFRKWWITLPKNHKSHSPLRDYMMDEITDT

Domains

Domain Start-End Description Sequence

Gene3D: G3DSA:3.40.50.1820
6-88 G3DSA:3.40.50.1820

RKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVSRFDIVPRIMLAR

HMMPfam: PF01764
IPR002921
7-87 Lipase_3
Lipase, class 3

KQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVSRFDIVPRIMLA

superfamily: SSF53474
7-86 SSF53474

KQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVSRFDIVPRIML

PatternScan: PS00120
9-18 LIPASE_SER,Lipases

IVFTGHSSGG

Gene3D: G3DSA:3.40.50.1820
157-212 G3DSA:3.40.50.1820

SPYRPAGTFVFSTEKRLVAVNNSDAILQMLFYTSQASDEQEWSLIPFRSIRDHHSY






List of Contributions

There has not been any contribution yet.


Analyses

Blast

Blast matches against Reference R-Genes. Show


Personal tools
Namespaces

Variants
Actions
PRGDB
META-SPECIES
Wiki
Toolbox