PRGDB00049835 (disease resistance protein-related / LRR protein-related)
| disease resistance protein-related / LRR protein-related | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 18401113 (NM_128195) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGAACTCTTGTTCTTTCCACAACTTCTTCATTTTCACCGCCGTGATCTTTCTCCGGTGTTTAAACCCCACCGCAGCAGCCACGTGTCATCCTGATGATGAGGCGGGTCTATTAGCTTTTAAATCGGGTATAACCAAAGATCCTTCAGGTATTCTAAGCACTTGGAAAAAAGGTACTGATTGCTGCTCTTGGAACGGTGTCAGTTGCCCTAACGGCAACCGTGTCGTCGTACTCACTATCCGCATAGAGTCCGACGATGCCGGAATCTTTCTCTCTGGCACAATCTCTCCGTCACTGGCCAAACTCCAGCATTTGGAAGGGGTCGTCTTTATCAATCTCAAAAACATCACAGGACCATTTCCACCATTTTTATTCAGATTACCACATCTAAAGTATGTTTACCTCGAGAATACACGTCTCTCTGGTCCTCTTCCAGCCAACATCGGCGCGCTTAACCGCTTAGATACATTAACCGTTAAAGGAAACCGGTTCATCGGTTCAATCCCGAGTTCCATATCCAATTTAACTCGGTTAAACTACCTAAATCTTGGCGGTAATCTCTTAACCGGAACAATACCGTTAGGGATTGCTAATCTCAAGCTCATTTCGAATCTTAATCTCGATGGAAACCGTCTCTCTGGAACCATCCCGGATATTTTCAAATCAATGACTAACCTTCGAATCCTCACTCTCTCACGCAACAGATTCTCCGGGAAGCTCCCTCCGTCGATTGCATCGCTCGCGCCGGTTCTTGCGTTCCTTGAGCTAGGTCAGAACAATCTCTCGGGGTCGATACCGAGCTATTTATCAAGATTCGTGGCGCTCGACACACTGGATCTCTCCAAGAACCGTTTCTCTGGAGCCGTGCCGAAGAGTTTGGCCAAGCTGACTAAAATTGCTAATATCAATCTCTCTCACAATCTTCTAACCAATCCATTCCCTGTTTTGAACGTGAAGAATTACATCTTGACTCTAGATCTGTCGTACAACAAGTTTCACATGGAAACAATCCCGGAATGGGTGACCTCAGCGTCGATCCTCGGCTCTTTGAAGTTGGCTAAATGTGGAATCAAGATGAGCTTAGACGATTGGAAAACAAGGCAAACTGATCTCTACGTTTCCATTGATCTTTCGGACAACGAGATCTCAGGGAGTCCACTGAGGTTCTTGAAGGGAGCAGAGCAACTACGGGAGTTTCGAATGTCGGGGAACAAACTCCGATTCGATTTGAGGAAGCTAAGTTTCTCGACGACGCTCGAGACGCTTGATCTATCAAGGAACTTAGTGTTCGGGAAAGTGCCGGCGAGGGTGGCCGGATTAAAGACACTTAACTTGAGTCAAAACCATCTTTGTGGGAAACTTCCGGTGACAAAGTTTCCAGAAAGTGTGTTTGCCGGCAACGACTGTCTATGCGGCTCCCCGCTAAGTCATTGTAAAGGTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein-related / LRR protein-related | disease resistance protein-related / LRR protein-related [Arabidopsis thaliana]. | MNSCSFHNFFIFTAVIFLRCLNPTAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSCPNGNRVVVLTIRIESDDAGIFLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFPVLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFLKGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGKVPARVAGLKTLNLSQNHLCGKLPVTKFPESVFAGNDCLCGSPLSHCKG |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-476 | PTHR24420,FAMILY NOT NAMED | MNSCSFHNFFIFTAVIFLRCLNPTAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSCPNGNRVVVLTIRIESDDAGIFLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFPVLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFLKGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGKVPARVAGLKTLNLSQNHLCGKLPVTKFPESVFAGNDCLCGSPLS |
| HMMPanther: PTHR24420:SF510 | 1-476 | PTHR24420:SF510 | MNSCSFHNFFIFTAVIFLRCLNPTAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSCPNGNRVVVLTIRIESDDAGIFLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFPVLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFLKGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGKVPARVAGLKTLNLSQNHLCGKLPVTKFPESVFAGNDCLCGSPLS |
| superfamily: SSF52058 | 27-312 | SSF52058,LRR | ATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSCPNGNRVVVLTIRIESDDAGIFLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNP |
| Gene3D: G3DSA:3.80.10.10 | 28-314 | G3DSA:3.80.10.10 | TCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSCPNGNRVVVLTIRIESDDAGIFLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFP |
| HMMPfam: PF08263 IPR013210
|
31-69 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
PDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSC |
| HMMPfam: PF13855 | 153-212 | LRR_8,Leucine rich repeat | RLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRL |
| HMMPfam: PF00560 IPR001611
|
225-247 | LRR_1 Leucine-rich repeat
|
NLRILTLSRNRFSGKLPPSIASL |
| superfamily: SSF52058 | 242-455 | SSF52058,LRR | PSIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFPVLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFLKGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGKVPARVAGLKTLNLSQNHLCGKLP |
| HMMPfam: PF13855 | 251-309 | LRR_8,Leucine rich repeat | LAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLL |
| Gene3D: G3DSA:3.80.10.10 | 324-459 | G3DSA:3.80.10.10 | TLDLSYNKFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFLKGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGKVPARVAGLKTLNLSQNHLCGKLPVTKF |
| HMMPfam: PF00560 IPR001611
|
440-459 | LRR_1 Leucine-rich repeat
|
LKTLNLSQNHLCGKLPVTKF |
List of Contributions
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