PRGDB00049919 (Os11g0228800)
| Os11g0228800 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 115484814 (NM_001074083) |
| Gene Class | RLP |
| Domain Type | LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGTAGAGATTGATAAGGATGTTCGTCGTTTGTCATCTTACCGATGGAAAGACGGTACTGCACCCAGACTTAATCTTCCACGCCTTCGAACTCTAGTATCACTTGAAGCAATTTCATCTTCCCCAGACATGTTGTCCTCAATTTTGTATGGATCAAGCTATCTTACTGTTCTTGAGCTTCAAGATTCAGAAATCACTCAAGTGCCAGCAACTATAGGGAATTTATGTAACTTGCGTTATATTGGCTTGCGACGCACCAAGGTGAAATCACTCCCGGGCTCTGTTGAAAAGTTATCAAACCTCCAAACGCTAGACATCAGGCAAACGCATATAGAGAGTCTACCACAAGGAATCACTAAAATAAAAAAGCTAAGGCACTTGTTAGCTGATAGATATGCTGATGAAAAGCACTCAGAGTTCCGGTTTTTCATAGGAATGCAAGCACCTAAAGATATGTCCAACCTTAAAGAACTACAAACTCTTGAGACCATGGAAGCGAGCAAAGACTTGGCCAAGCAGCTGAAGGAACTAATACAACTACAAAGTGTGTGGATTGATGGCATAAGTTCTGTCGATTGTCAAAATATTTTTGATTCACTATCAAAGATGCCGCTTCTTTCTAGTTTGCTTCTTTCTGCAAGGGATCAGAATGAACGACTCTGCTTTGAGGCATTCAAGCCCATCTCCACTCAATTACACAGGTTAATTATCAGAGGGAAATGGGCCACTGGAACAATGGACTGCCCAATATTTCGTACCCATGGCACATGTGTCAAATATTTAGCTCTAAGTTGGTGTGATCTTGGGGATGATCCATTAAGGATGCTTGCATTATTGCACTTGCCAAATCTCACACATCTGAGACTGAGCAACATGCATAATGCAAAAAAGTTGGTTCTATATGCAGAAAACTTTTTCCGCCTGAAGTCCCTTGTTTTGAAGGACATGCCACATGTCAACCAGATAAATATTATAGGTGGCTCTCTGTCATGCATTGAAGCTTTGTACATCTTGGCACTGCCAAACCTGGACAAAGTCCCACTGGGCATTGAATCCATTCTCTCCCTGAAGAAACTATGGCTGCTGGGCTTGCACATGGACTTTAGGAAGCAATGGAACAATAGTGGAATGCACCAGAAGATGCAGCATATTCCAGAGGAGGATTTGGGTCATCAAAAATGGACCATAACATGTAAACATGGTATACTGGAGGACAAGTTAGAGGCTCCACGTGCAACTCCAATGTATGCCGTGCCTTCCGAGTTCTCAAAAACTGTGGAGCCAACAGATCTAAAGCATGAGTTTCTAAAAGAAATTACAAACAATTTCTCCAAGGAACAAATACTTGGTCAAGGAGCATTTGGAACTGTTTACCGGGGGCTACATAAAAATGGAGAAGAGATCGCTGTGAAGGTGCTTCGTGTTGTGCTTGATCCTGAACGTGGCGAGGAGCAATTCCAGAATGAATGGAGCGGACTTAACTGGCTCACGTGTTACAAAATCATTATGGGGACTTGCCGGGGCTTAAAGTATCTACATAACGAATTGAAAGAACCCATGTACCATTTGGACTTGAAACCTGACAACATATTGCTAGATAAGAACATGGTACCGAAAATTTCAGATTTTGGTTTATCCAAGCTCTTTGGTGAGGAAAAGACACGAATCACCCAAACTTTCAGAGGAACATTAGGATACCTGCCACTAGAATACCTACGATCAGGTATAGTCTCAGACAAATTGGACATATTCAGCCTCGGTGTTGTAATGTTGAAGATAATGGCAGGACCTAGTAACTGGTGCAAACATGAGGAGATGCCTCACAACAGATTTATTGATTTAAGCATGTACCGGTTAGGCGGTTACATTTTGAAGCACGGTCGCTACCGGCCGCCGCCGCCTCCTGTCCTGCTTGAGCGCAGACACCGCCGGCCGCTGGCCGCCGACTCCACGCCCTCCCTCTCCCCCCAAGCCCCACTCTGGCCATCTCCTCGGCCAGATCCAGCGCCGCGGAGGTTGGGGACGCCGGATCTGATGCCCAAGGGCGGCAGCGGGAGGCCTCCCCGAGCTTGCGAGGGGGCTGCCGCTGAGGTGGCCACGGTGACGAGCTCAGTAGTGGTAGTGTCGTCTTCGGGGCTTCGGCGACGTTGCTCTCTCACCAACCACAGCCTGCAGCACGGTGCACAGATCGCACTCGCAGCCCGGAAGGAGTCGAGGAGAACATGGCGAGGAAGATCCTATTTTTTCGGAGATGAGAGCGGCGAGCGGGCGTGGCGGCGAGCAGTGGCGGCATTGGGCAGATCCGGCACGGCACGGCTGGCGGCGCATCGTCGAGCGCCACCTCCACTGCCGAGCGGCGGCGGGCGCGACGTCGGCGGATACAGTATGGCACGGCTGCAGGCGTGGAGGCGACGGTTGACGACGTATCCGGCCATGGTAGGGCGTATCCGGCGCGATGACGGATCCGGGGATAATCCTGTACGGGAAGGCGCGGTGTCGGCGGATCCAACATGGCATGGCGAGGCGAGGGGGCGGCGCATCCGGCCGCCGCTCCGCGCCCCACGTACATGGATCCGGCTGCGGTGGCGGCTCGACGGCGGATCCCGTGACGGGGCGACCGCGGGCGACAGCCGAGGCGGCGGCGGATCGGGCCACCGCTCCGCGCCCCACGCACATGGCGGCGACCACCGCGGCGGCGAGTTCGAACACCGAAGGACATGGAGGAGCAACGGCGAACACCTCCATGATGCTTCGCCGTTGATGTCCGGAGCAAGTGCCGACAAAAATTTAACTTACGCTTATAGATTGTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| hypothetical protein | Os11g0228800 [Oryza sativa (japonica cultivar-group)]. | MVEIDKDVRRLSSYRWKDGTAPRLNLPRLRTLVSLEAISSSPDMLSSILYGSSYLTVLELQDSEITQVPATIGNLCNLRYIGLRRTKVKSLPGSVEKLSNLQTLDIRQTHIESLPQGITKIKKLRHLLADRYADEKHSEFRFFIGMQAPKDMSNLKELQTLETMEASKDLAKQLKELIQLQSVWIDGISSVDCQNIFDSLSKMPLLSSLLLSARDQNERLCFEAFKPISTQLHRLIIRGKWATGTMDCPIFRTHGTCVKYLALSWCDLGDDPLRMLALLHLPNLTHLRLSNMHNAKKLVLYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEALYILALPNLDKVPLGIESILSLKKLWLLGLHMDFRKQWNNSGMHQKMQHIPEEDLGHQKWTITCKHGILEDKLEAPRATPMYAVPSEFSKTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYRLGGYILKHGRYRPPPPPVLLERRHRRPLAADSTPSLSPQAPLWPSPRPDPAPRRLGTPDLMPKGGSGRPPRACEGAAAEVATVTSSVVVVSSSGLRRRCSLTNHSLQHGAQIALAARKESRRTWRGRSYFFGDESGERAWRRAVAALGRSGTARLAAHRRAPPPLPSGGGRDVGGYSMARLQAWRRRLTTYPAMVGRIRRDDGSGDNPVREGAVSADPTWHGEARGRRIRPPLRAPRTWIRLRWRLDGGSRDGATAGDSRGGGGSGHRSAPHAHGGDHRGGEFEHRRTWRSNGEHLHDASPLMSGASADKNLTYAYRL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52047 | 26-367 | RNI-like,LRR | LPRLRTLVSLEAISSSPDMLSSILYGSSYLTVLELQDSEITQVPATIGNLCNLRYIGLRRTKVKSLPGSVEKLSNLQTLDIRQTHIESLPQGITKIKKLRHLLADRYADEKHSEFRFFIGMQAPKDMSNLKELQTLETMEASKDLAKQLKELIQLQSVWIDGISSVDCQNIFDSLSKMPLLSSLLLSARDQNERLCFEAFKPISTQLHRLIIRGKWATGTMDCPIFRTHGTCVKYLALSWCDLGDDPLRMLALLHLPNLTHLRLSNMHNAKKLVLYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEALYILALPNLDKVPLGIESILSLKKLWLLGLHMD |
| Gene3D: G3DSA:3.80.10.10 | 27-127 | no description | PRLRTLVSLEAISSSPDMLSSILYGSSYLTVLELQDSEITQVPATIGNLCNLRYIGLRRTKVKSLPGSVEKLSNLQTLDIRQTHIESLPQGITKIKKLRHL |
| HMMPanther: PTHR24420 | 30-618 | FAMILY NOT NAMED,FAMILY NOT NAMED | RTLVSLEAISSSPDMLSSILYGSSYLTVLELQDSEITQVPATIGNLCNLRYIGLRRTKVKSLPGSVEKLSNLQTLDIRQTHIESLPQGITKIKKLRHLLADRYADEKHSEFRFFIGMQAPKDMSNLKELQTLETMEASKDLAKQLKELIQLQSVWIDGISSVDCQNIFDSLSKMPLLSSLLLSARDQNERLCFEAFKPISTQLHRLIIRGKWATGTMDCPIFRTHGTCVKYLALSWCDLGDDPLRMLALLHLPNLTHLRLSNMHNAKKLVLYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEALYILALPNLDKVPLGIESILSLKKLWLLGLHMDFRKQWNNSGMHQKMQHIPEEDLGHQKWTITCKHGILEDKLEAPRATPMYAVPSEFSKTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYR |
| HMMPanther: PTHR24420:SF757 | 30-618 | OS11G0228800 PROTEIN | RTLVSLEAISSSPDMLSSILYGSSYLTVLELQDSEITQVPATIGNLCNLRYIGLRRTKVKSLPGSVEKLSNLQTLDIRQTHIESLPQGITKIKKLRHLLADRYADEKHSEFRFFIGMQAPKDMSNLKELQTLETMEASKDLAKQLKELIQLQSVWIDGISSVDCQNIFDSLSKMPLLSSLLLSARDQNERLCFEAFKPISTQLHRLIIRGKWATGTMDCPIFRTHGTCVKYLALSWCDLGDDPLRMLALLHLPNLTHLRLSNMHNAKKLVLYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEALYILALPNLDKVPLGIESILSLKKLWLLGLHMDFRKQWNNSGMHQKMQHIPEEDLGHQKWTITCKHGILEDKLEAPRATPMYAVPSEFSKTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYR |
| Gene3D: G3DSA:3.80.10.10 | 152-335 | no description | MSNLKELQTLETMEASKDLAKQLKELIQLQSVWIDGISSVDCQNIFDSLSKMPLLSSLLLSARDQNERLCFEAFKPISTQLHRLIIRGKWATGTMDCPIFRTHGTCVKYLALSWCDLGDDPLRMLALLHLPNLTHLRLSNMHNAKKLVLYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEAL |
| Seg: seg | 199-212 | seg | SLSKMPLLSSLLLS |
| Seg: seg | 276-289 | seg | LALLHLPNLTHLRL |
| ProfileScan: PS50011 IPR000719
|
332-678 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
IEALYILALPNLDKVPLGIESILSLKKLWLLGLHMDFRKQWNNSGMHQKMQHIPEEDLGHQKWTITCKHGILEDKLEAPRATPMYAVPSEFSKTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYRLGGYILKHGRYRPPPPPVLLERRHRRPLAADSTPSLSPQAPLWPSPRPDPAPRRLGTPDL |
| Seg: seg | 354-364 | seg | LSLKKLWLLGL |
| superfamily: SSF56112 IPR011009
|
415-664 | Protein kinase-like (PK-like) Protein kinase-like domain
|
MYAVPSEFSKTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYRLGGYILKHGRYRPPPPPVLLERRHRRPLAADSTPSLSPQAPLWPSP |
| Gene3D: G3DSA:3.30.200.20 | 424-494 | no description | KTVEPTDLKHEFLKEITNNFSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLN |
| HMMSmart: SM00219 IPR020635
|
443-654 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYRLGGYILKHGRYRPPPPPVLLERRHRRPLAADSTPSL |
| HMMSmart: SM00220 IPR002290
|
443-749 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSKEQILGQGAFGTVYRGLHKNGEEIAVKVLRVVLDPERGEEQFQNEWSGLNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLSMYRLGGYILKHGRYRPPPPPVLLERRHRRPLAADSTPSLSPQAPLWPSPRPDPAPRRLGTPDLMPKGGSGRPPRACEGAAAEVATVTSSVVVVSSSGLRRRCSLTNHSLQHGAQIALAARKESRRTWRGRSYFF |
| PatternScan: PS00107 IPR017441
|
449-471 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGAFGTVYRGLHKNGEEIAVK |
| HMMPfam: PF00069 IPR000719
|
493-612 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
LNWLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFI |
| Gene3D: G3DSA:1.10.510.10 | 495-603 | no description | WLTCYKIIMGTCRGLKYLHNELKEPMYHLDLKPDNILLDKNMVPKISDFGLSKLFGEEKTRITQTFRGTLGYLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKH |
| PatternScan: PS00108 IPR008271
|
520-532 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
MYHLDLKPDNILL |
| Seg: seg | 628-646 | seg | RYRPPPPPVLLERRHRRPL |
| Seg: seg | 689-719 | seg | RACEGAAAEVATVTSSVVVVSSSGLRRRCSL |
| Seg: seg | 771-784 | seg | ARLAAHRRAPPPLP |
| Seg: seg | 869-894 | seg | RDGATAGDSRGGGGSGHRSAPHAHGG |
List of References
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