PRGDB00050091 (Pto resistance protein candidate Tg-13)

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Pto resistance protein candidate Tg-13
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 150408777 (EF492523)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Musa acuminata

Comment?

Musa acuminata Pto resistance protein candidate Tg-13 gene, partial cds.

DNA Sequence

AAAGTCTACAAGGGCACACTAGACGATGGCACTAAAGTTGCCGTCAAGCGAGGGAATCCGAGGTCCGAGCAAGGGCTAGCTGAATTCCAGACTGAGATCGAGATGTTATCCAAGCTCCGCCATCGCCATCTGGTCTCGCTCATAGGCTACTGTGATGAGCGTTCTGAGATGATTTTGGTCTATGAATACATGGCGAATGGGCCTCTAAGGAGCCATCTATATGGTACCAACCTTCCATCGCTGTCATGGAGACAGCGCCTTGAGATCTGCATCGGTGCTGCAAGGGGATTGCATTACCTTCACACCGGTGCAGCACAGAGCATCATCCACCGTGACGTGAAGACCACCAACATTCTTTTAGATGAGAACTTCGTTGCTAAGGTGGCAGACTTCGGCCTTTCAAAGACTGGTCCTGCCTTGGATCAGACCCATGTTAGCACTGCGGTGAAAGGGAGCTTTGGATATCTCGATCCTGAGTACTTCAGGAGGCAGCAGCTGACTGAGAAGTCC


Protein sequences

Name Description Sequence
Pto resistance protein candidate Tg-13 Pto resistance protein candidate Tg-13 [Musa acuminata].

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-170 PTHR24420,FAMILY NOT NAMED

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

Gene3D: G3DSA:3.30.200.20
1-49 G3DSA:3.30.200.20

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIG

ProfileScan: PS50011
IPR000719
1-170 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

superfamily: SSF56112
IPR011009
1-170 Kinase_like
Protein kinase-like domain

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

HMMPfam: PF07714
IPR001245
1-170 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

HMMPanther: PTHR24420:SF418
1-170 PTHR24420:SF418,SUBFAMILY NOT NAMED

KVYKGTLDDGTKVAVKRGNPRSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

Gene3D: G3DSA:1.10.510.10
50-170 G3DSA:1.10.510.10

YCDERSEMILVYEYMANGPLRSHLYGTNLPSLSWRQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKS

PatternScan: PS00108
IPR008271
108-120 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKTTNILL


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Analyses

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