PRGDB00050220 (Pto resistance protein candidate Tg-38)

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Pto resistance protein candidate Tg-38
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 151580022 (EF589819)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Musa acuminata

Comment?

Musa acuminata Pto resistance protein candidate Tg-38 gene, partial cds.

DNA Sequence

AACGTGTACATTGGCGAGCTCGACGACGGGACGAAGGTGGCGGTCAAGCGAGGGAATCCGCAGTCGGAGCAGGGGATCAACGAGTTCCAGACAGAGATCCAGATTCTGTCCAAGCTTCGTCACCGCCACCTGGTGTCGCTGATCGGATACTGCGACGAGAACTCGGAGATGATTTTGGTGTACGAGTACATGGCCAATGGGCCTTTCAGAGACCACATCTACGGGAGCGACCTACCGCCGCTGTCGTGGAAGCAGCGGCTGGAGATCTGCATCGGGGCCGCGCGCGGGCTACACTACCTCCACACTGGCACCGCGCAGGGCATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTGGACGAAAACTTCATCGCCAAGGTGTCCGACTTCGGCCTCTCCAAGGACGCGCCGGGGATGAACCAGACGCACGTCAGCACGGCGGTGAAGGGCAGCTTCGGCTACCTCTACCCCGAGTACTTCAGGTGCCAGCAGCTCACGGACAAGTCG


Protein sequences

Name Description Sequence
Pto resistance protein candidate Tg-38 Pto resistance protein candidate Tg-38 [Musa acuminata].

NVYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-170 PTHR24420,FAMILY NOT NAMED

NVYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

HMMPanther: PTHR24420:SF550
1-170 PTHR24420:SF550

NVYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

Gene3D: G3DSA:3.30.200.20
1-49 G3DSA:3.30.200.20

NVYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIG

ProfileScan: PS50011
IPR000719
1-170 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

NVYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

superfamily: SSF56112
IPR011009
2-170 Kinase_like
Protein kinase-like domain

VYIGELDDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

HMMPfam: PF07714
IPR001245
8-170 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

DDGTKVAVKRGNPQSEQGINEFQTEIQILSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDKS

Gene3D: G3DSA:1.10.510.10
50-169 G3DSA:1.10.510.10

YCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFIAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLYPEYFRCQQLTDK

PatternScan: PS00108
IPR008271
108-120 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKTTNILL






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Analyses

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