PRGDB00050222 (Pto resistance protein candidate Tg-21)

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Pto resistance protein candidate Tg-21
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 151580018 (EF589817)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Musa acuminata

Comment?

Musa acuminata Pto resistance protein candidate Tg-21 gene, partial cds.

DNA Sequence

AACGTGTACCTTGGCGAGCTGGAGGACGGGACGAAGGTGGCGGTCAAGCGAGGAAACCCGCAGTCGGAGCAGGGCATCAACGAGTTCCAGACGGAGATCCAGATGCTGTCCAAGCTCCGCCACCGCCACCTGGTGTCGCTGATCGGCTATTGCGACGAGAACTCGGAGATGATCCTGGTGTACGAGTACATGGCGAACGGGCCTTTCCGGGATCACATCTACGGCAGCGACCTCCCTCCTCTGTCGTGGAAGCAGAGGCTAGAGATCTGCATCGGGGCCGCGCGCGGGCTGCACTACCTCCACACCGGCACCGCGCAGGGGATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTCGATGAGAACTTCGTGGCCAAGGTGTCGGACTTCGGCCTCTCCAAGGACGCGCCAGGGATGAACCAGACGCACGTCAGCACCGCCGTGAAGGGCAGCTTCGGCTACCTCGACCCCGAGTACTTCAGGTGCCAGCAGCTGACGGATAAGTCG


Protein sequences

Name Description Sequence
Pto resistance protein candidate Tg-21 Pto resistance protein candidate Tg-21 [Musa acuminata].

NVYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420:SF550
1-170 PTHR24420:SF550

NVYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

Gene3D: G3DSA:3.30.200.20
1-49 G3DSA:3.30.200.20

NVYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIG

HMMPanther: PTHR24420
1-170 PTHR24420,FAMILY NOT NAMED

NVYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

ProfileScan: PS50011
IPR000719
1-170 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

NVYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

superfamily: SSF56112
IPR011009
2-170 Kinase_like
Protein kinase-like domain

VYLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

HMMPfam: PF07714
IPR001245
3-170 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

YLGELEDGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDKS

Gene3D: G3DSA:1.10.510.10
50-169 G3DSA:1.10.510.10

YCDENSEMILVYEYMANGPFRDHIYGSDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFVAKVSDFGLSKDAPGMNQTHVSTAVKGSFGYLDPEYFRCQQLTDK

PatternScan: PS00108
IPR008271
108-120 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKTTNILL






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Analyses

Blast

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