PRGDB00050617 (disease resistance-like protein)
| disease resistance-like protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 71363559 (DQ104375) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Populus tremula |
DNA Sequence
ATGCCAGGAGTAGGGAAGACGACTATAGCACAAGTTGTATTTAATCAACTCTGCTATGGATTCGAGGGAAGCTGTTTTCTTTCGGATATCAATGAAAGGTCAAAACAAGTTAATGGTCTGGCTCTTTTACAAAAGCAACTTCTTCACGATATTTTAAAACAAGATGCTGCAAACTTCGATTGTGTTGATAGAGGAAAGGTTCTAATCAAAGAGCGACTTTGTCGCAAAAGAGTTCTTGTTGTTGCTGATGATGTTGCTCATCAGGACCAGCTAAAAGCTCTGATGGGAGATCGAAGTTGGTTTGGTCCCGGAAGTAGAGTAATTATCACAACAAGAGATTCAAATCTTCTTCGTGAAGCAGATCAAACATATCAGATCAAAGAACTGGAACCAGATGAGGCCCTTCAGCTTTTCAGATGGCATGCCTTTAAGGACACCAAGCCAACAGAAGATTATATTGATCTTTCGAAGGATGTAGTTGATTACTGTGGGGGGCTGCCTCTTGCTCTTGAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance-like protein | disease resistance-like protein [Populus tremula]. | MPGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKELEPDEALQLFRWHAFKDTKPTEDYIDLSKDVVDYCGGLPLALE |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 1-170 | SSF52540 | MPGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKELEPDEALQLFRWHAFKDTKPTEDYIDLSKDVVDYCGGLPLAL |
| HMMPanther: PTHR11017:SF20 | 1-170 | PTHR11017:SF20,SUBFAMILY NOT NAMED | MPGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKELEPDEALQLFRWHAFKDTKPTEDYIDLSKDVVDYCGGLPLAL |
| HMMPfam: PF00931 IPR002182
|
1-170 | NB-ARC,NBS NB-ARC
|
MPGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKELEPDEALQLFRWHAFKDTKPTEDYIDLSKDVVDYCGGLPLAL |
| HMMPanther: PTHR11017 | 1-170 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MPGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKELEPDEALQLFRWHAFKDTKPTEDYIDLSKDVVDYCGGLPLAL |
| Gene3D: G3DSA:3.40.50.300 | 2-128 | G3DSA:3.40.50.300 | PGVGKTTIAQVVFNQLCYGFEGSCFLSDINERSKQVNGLALLQKQLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRDSNLLREADQTYQIKE |
| FPrintScan: PR00364 IPR000767
|
72-86 | DISEASERSIST Disease resistance protein
|
RLCRKRVLVVADDVA |
| FPrintScan: PR00364 IPR000767
|
163-171 | DISEASERSIST Disease resistance protein
|
CGGLPLALE |
List of Contributions
There has not been any contribution yet.
