PRGDB00050621 (disease resistance-like protein)
disease resistance-like protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 71363550 (DQ104370) |
Gene Class | NL |
Domain Type | NBS, LRR, Others |
Gene Species | Populus tremula |
DNA Sequence
ATGCCAGGAGTTGCGAAGACTACTATAGCAGAAGTTGTATTTAATCAACTCTGCAATGGATTCGATGGAAGCTGTTTTCTTTCGGATATAAATGAAAGATCAAAACAATTTAATGGTGGTATTGTTGAATTACAAAAGCAACTTCTTCATGATATTTTAAAACAAGATGTTGCTAACATCAATTGTGTCGATAGAGGAAAGGTTCTGATCAAAGAGCGACTTTGTCGCAAAAGAGTTCTTCTTGTTGCTGATGATGTGGCTCATCTGGACCAGCGAAAAGCTTTGATGGGAGATCGAAGTTGGCTTGGTCCTGGAAGTAGAGTAATTATCACAACAAGAGATTCAAGTTTACTTCGTGAAGCAGATCAAAGATATCAGATCAAAGAACTGGAACCAGATGAGGCCCTTCAGCTTTTCAGCTGGCATGCCTTTAAGGACACCAAGCCAACAGAAGATTATATTGAGCTTTCGAAGGATGTAGTTGATTACTGTGGGGGTCTTCCACTTGCTCTTGAG
Protein sequences
Name | Description | Sequence |
---|---|---|
disease resistance-like protein | disease resistance-like protein [Populus tremula]. | MPGVAKTTIAEVVFNQLCNGFDGSCFLSDINERSKQFNGGIVELQKQLLHDILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVAHLDQRKALMGDRSWLGPGSRVIITTRDSSLLREADQRYQIKELEPDEALQLFSWHAFKDTKPTEDYIELSKDVVDYCGGLPLALE |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR11017:SF20 | 1-171 | PTHR11017:SF20,SUBFAMILY NOT NAMED | MPGVAKTTIAEVVFNQLCNGFDGSCFLSDINERSKQFNGGIVELQKQLLHDILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVAHLDQRKALMGDRSWLGPGSRVIITTRDSSLLREADQRYQIKELEPDEALQLFSWHAFKDTKPTEDYIELSKDVVDYCGGLPLAL |
HMMPanther: PTHR11017 | 1-171 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MPGVAKTTIAEVVFNQLCNGFDGSCFLSDINERSKQFNGGIVELQKQLLHDILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVAHLDQRKALMGDRSWLGPGSRVIITTRDSSLLREADQRYQIKELEPDEALQLFSWHAFKDTKPTEDYIELSKDVVDYCGGLPLAL |
HMMPfam: PF00931 IPR002182
|
1-171 | NB-ARC,NBS NB-ARC
|
MPGVAKTTIAEVVFNQLCNGFDGSCFLSDINERSKQFNGGIVELQKQLLHDILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVAHLDQRKALMGDRSWLGPGSRVIITTRDSSLLREADQRYQIKELEPDEALQLFSWHAFKDTKPTEDYIELSKDVVDYCGGLPLAL |
superfamily: SSF52540 | 1-171 | SSF52540 | MPGVAKTTIAEVVFNQLCNGFDGSCFLSDINERSKQFNGGIVELQKQLLHDILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVAHLDQRKALMGDRSWLGPGSRVIITTRDSSLLREADQRYQIKELEPDEALQLFSWHAFKDTKPTEDYIELSKDVVDYCGGLPLAL |
FPrintScan: PR00364 IPR000767
|
73-87 | DISEASERSIST Disease resistance protein
|
RLCRKRVLLVADDVA |
FPrintScan: PR00364 IPR000767
|
164-172 | DISEASERSIST Disease resistance protein
|
CGGLPLALE |
List of Contributions
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