PRGDB00050632 (Pto-like receptor kinase resistance protein)

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Pto-like receptor kinase resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 47498957 (AY583624)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Rosa roxburghii

Comment?

Rosa roxburghii clone STK8 Pto-like receptor kinase resistance protein gene, partial cds.

DNA Sequence

TTGGGGAGGGGGTGTTCGGGAAAGTGTACCTTGGGGTGTTGGAAGATAGTACTAAGCTTGCTATCAAACGAGGGAACCCGAACTCTGAGCAAGGCATTAATGAGTTCAGAACAGAAATGGACATGCTCTCCAAGCTAAGACATCGCCACCTTGTTTCACTGATTGGATTCTGTGATGAGAATAATGAGATGATACTGGTGTATGAGTACATGGCTAATGGACCCCTTCGAGACCACCTCTATGGCTCGAACCTGCTTCCATTGTCATGGAAGCAAAGGCTCGAGGTTTGCATTGGCGCTGCTCGTGGTTTGCATTATCTGCATACTGGTGTAGCACAAGGCATTATCCATCGTGATGTCAAGACGACGAATATCCTCCTGGATGAGAATTTCGTTGCAAAAGTAGCTGACTTTGGACTGTCAAAAGCTGCTCCATCGTTGGAACAAACCCGTGTCAGCACAGCCGTGAAGGGAAGTTTTGGTTATCTTGATCCTGAGTACTTCAGGAGGCAGCAGCTTACTGAGAAATCCGACGTGTATTCATTCGGCGT


Protein sequences

Name Description Sequence
Pto-like receptor kinase resistance protein Pto-like receptor kinase resistance protein [Rosa roxburghii].

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-183 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

HMMPfam: PF07714
IPR001245
1-183 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

HMMPanther: PTHR24420
1-183 PTHR24420,FAMILY NOT NAMED

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

Gene3D: G3DSA:3.30.200.20
1-55 G3DSA:3.30.200.20

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIG

superfamily: SSF56112
IPR011009
1-183 Kinase_like
Protein kinase-like domain

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

HMMPanther: PTHR24420:SF550
1-183 PTHR24420:SF550

GEGVFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

Gene3D: G3DSA:1.10.510.10
56-183 G3DSA:1.10.510.10

FCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGVAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTRVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV

PatternScan: PS00108
IPR008271
114-126 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKTTNILL






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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