PRGDB00050635 (Pto-like receptor kinase resistance protein)

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Pto-like receptor kinase resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 47498951 (AY583621)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Rosa roxburghii

Comment?

Rosa roxburghii clone STK1 Pto-like receptor kinase resistance protein gene, partial cds.

DNA Sequence

TAGGGAAGGGGGTTTTGGGTATGTTTATAAAGGAACTCTCTCTAATGGCACCAAAGTGGCTGTGAAGCGTTGTAAGCAAGAAGGGCAAAGGTCAGGCCAAGGCCTTCCAGAATTCGAAACAGAAATCATAGTGTTGTCCAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTGATGAAGAATCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACCTTGAGAGATCATTTGTATGAATCGGATGTGCCTCGCTTGTCGTGGAAGCAAAGACTTGAAATTTGCATAGGTTCAGCAACTGGACTTGATTATCTCCATAAAGGTGCAGCAGGGGGCATCATCCACCGTGATGTGAAGTCCACCAACATATTGCTTGATGAGAACCTTGTTGCTAAAGTCGCTGACTTCGGGCTTTCGAGGTCTGGCCCTCTTGATGAAACTCATGTCAGTACAGTTGTGAAAGGCACTATCGGTTACCTTGATCCCGAGTACATGATGTCACAGCAGTTGACAGAGAAGTCTGATGTCTACTCGTTCGGGGT


Protein sequences

Name Description Sequence
Pto-like receptor kinase resistance protein Pto-like receptor kinase resistance protein [Rosa roxburghii].

REGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-185 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

REGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

HMMPfam: PF07714
IPR001245
2-185 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

EGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

Gene3D: G3DSA:3.30.200.20
2-58 G3DSA:3.30.200.20

EGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIG

HMMPanther: PTHR24420:SF785
2-185 PTHR24420:SF785

EGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

superfamily: SSF56112
IPR011009
2-185 Kinase_like
Protein kinase-like domain

EGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

HMMPanther: PTHR24420
2-185 PTHR24420,FAMILY NOT NAMED

EGGFGYVYKGTLSNGTKVAVKRCKQEGQRSGQGLPEFETEIIVLSKIRHRHLVSLIGYCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

Gene3D: G3DSA:1.10.510.10
59-185 G3DSA:1.10.510.10

YCDEESEMILVYEFMEKGTLRDHLYESDVPRLSWKQRLEICIGSATGLDYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDETHVSTVVKGTIGYLDPEYMMSQQLTEKSDVYSFGV

PatternScan: PS00108
IPR008271
117-129 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKSTNILL






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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