PRGDB00050695 (disease resistance protein-like protein MsR1)
disease resistance protein-like protein MsR1 | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 34391518 (AY145085) |
Gene Class | CNL |
Domain Type | LRR, NBS, Ser-Thr Kinase, Ser-Thr Kinase, Others |
Gene Species | Medicago sativa |
DNA Sequence
ATGAGTAGCGCCACACATATTATTACCCTTGCAACAAGATTTCAATTTCATGATGTCTTGAACAAAATATCTCAAATTGCTGAAAAAGCACAAGAGAACCAAAGTTCAAGGCGATCGTTGAGATTAATCTTAAGGAATTTATCTCCCGTTGTACAAGATATAAAGCAATACAATGATCATTTGGATCACCCCAGAGAAGAAATAAATAGTTTGATAGAAGAAAATGATGCAGAAGAAAGTGCATGCAAATGTTCTTCTGAGAATGATTCCAATGTGGTTGAGAAGCTCAAGAATGAAACTTTTGAAGCTGGACCACCTTTCAAGTGTCCTTTTGATGTTCCTGAAAATCCAAAATTCACTGTTGGGTTGGATATACCATTTAGCAAGTTGAAAATGGAGCTTTTAAGGGATGGTAGTTCCACCCTTGTGTTGACTGGCTTAGGAGGATTGGGGAAGACCACTTTGGCTACTAAGCTTTGTTGGGATCAAGAAGTTAATGGTAAATTCATGGAAAACATTATATTTGTCACCTTCTCAAAAACACCCATGTTGAAGACTATTGTAGAGAGAATACATGAACATTGTGGATATCCAGTACCTGAGTTTCAAAATGATGAAGATGCTGTCAATAGGTTAGGACTTCTGTTGAAGAAAGTTGAGGGAAGTCCATTATTGTTGGTTCTGGATGATGTTTGGCCAAGCTCAGAATCCCTTGTTGAGAAACTTCAATTCCAGATATCAGATTTCAAAATTCTGGTGACTTCAAGGGTTGCATTTCCAAGGTTTAGCACAACATGTATCCTAAAACCTCTTGCTCATGAAGACGCAGTAACGCTTTTCCATCACTATGCTCTGATGGAAAAAAATAGTTCAGATATTATCGACAAAAATCTTGTCGAAAAGGTCGTTAGAAGTTGCCAAGGTTTACCGCTTACCATTAAAGTAATTGCTACATCGCTAAAAAATCGGCCTCATGACTTGTGGCGTAAGATAGTGAAGGAACTGTCACAAGGTCATTCTATTCTTGATTCTAATACCGAATTACTTACTCGCCTCCAAAAGATCTTCGATGTTTTGGAAGATAATCCCACAATCATTGAGTGCTTCATGGACCTAGCCTTATTTCCCGAAGACCATAGAATTCCTGTCGCTGCTCTCGTTGATATGTGGGCAGAGCTGTATAGACTAGATGACACCGGAATACAAGCAATGGAAATCATCAACAAATTAGGCATCATGAATTTGGCTAATGTCATAATACCAAGGAAAGATGCAAGTGACACAGACAATAACAACTACAATAATCACTTCATCATGCTTCATGATATTCTAAGAGAACTTGGAATTTACCGAAGCACCAAGGAACCATTTGAGCAGAGAAAAAGACTGATTATTGACATGCATAAAAATAAAAGTGGGCTCACGGAGAAGCAACAAGGCTTGATGATCCGTATATTGTCAAAGTTTATGAGATTGTGTGTTAAACAGAATCCTCAACAGCTCGCTGCCCGTATATTGTCGGTATCAACTGATGAAACATGTGCGTTGGATTGGTCTCAAATGGAACCAGCTCAGGTTGAGGTTCTGATTTTAAATCTTCATACCAAGCAGTACTCATTACCCGAGTGGATTGGAAAAATGAGTAAACTAAAAGTTCTGATAATCACAAACTACACTGTCCATCCTTCTGAACTGACCAACTTTGAGCTTCTCAGTTCTTTACAGAATCTGGAAAAAATTAGACTAGAGCGAATTTCCGTTCCTTCGTTCGCCACAGTAAAGAATCTGAAAAAACTATCGCTCTACATGTGTAATACAAGACTGGCTTTTGAAAAAGGTAGCATCCTAATTTCAGATGCATTTCCAAATTTAGAAGAATTGAACATTGATTACTGCAAAGATTTGTTGGTATTGCCAACTGGTATCTGTGATATCATCTCACTAAAGAAGCTCAGTGTTACTAATTGCCACAAGATTTCTTCACTTCCTGAAGATATTGGAAAATTGGAGAATTTGGAACTTCTAAGCCTCAGTTCATGTACTGACTTGGAAGCTATACCGACTTCCATTGAAAAGCTGTTAAATCTAAAACATCTTGACATTTCAACTGCGTAA
Protein sequences
Name | Description | Sequence |
---|---|---|
disease resistance protein-like protein MsR1 | disease resistance protein-like protein MsR1 [Medicago sativa]. | MSSATHIITLATRFQFHDVLNKISQIAEKAQENQSSRRSLRLILRNLSPVVQDIKQYNDHLDHPREEINSLIEENDAEESACKCSSENDSNVVEKLKNETFEAGPPFKCPFDVPENPKFTVGLDIPFSKLKMELLRDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQFQISDFKILVTSRVAFPRFSTTCILKPLAHEDAVTLFHHYALMEKNSSDIIDKNLVEKVVRSCQGLPLTIKVIATSLKNRPHDLWRKIVKELSQGHSILDSNTELLTRLQKIFDVLEDNPTIIECFMDLALFPEDHRIPVAALVDMWAELYRLDDTGIQAMEIINKLGIMNLANVIIPRKDASDTDNNNYNNHFIMLHDILRELGIYRSTKEPFEQRKRLIIDMHKNKSGLTEKQQGLMIRILSKFMRLCVKQNPQQLAARILSVSTDETCALDWSQMEPAQVEVLILNLHTKQYSLPEWIGKMSKLKVLIITNYTVHPSELTNFELLSSLQNLEKIRLERISVPSFATVKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEELNIDYCKDLLVLPTGICDIISLKKLSVTNCHKISSLPEDIGKLENLELLSLSSCTDLEAIPTSIEKLLNLKHLDISTA |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52540 | 108-335 | SSF52540 | KCPFDVPENPKFTVGLDIPFSKLKMELLRDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQFQISDFKILVTSRVAFPRFSTTCILKPLAHEDAVTLFHHYALMEKNSSDIIDKNLVEKVVRSCQGLPLTIKVIATSLKNRPHDLWRKIVKEL |
HMMPanther: PTHR23155:SF239 | 118-702 | PTHR23155:SF239,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | KFTVGLDIPFSKLKMELLRDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQFQISDFKILVTSRVAFPRFSTTCILKPLAHEDAVTLFHHYALMEKNSSDIIDKNLVEKVVRSCQGLPLTIKVIATSLKNRPHDLWRKIVKELSQGHSILDSNTELLTRLQKIFDVLEDNPTIIECFMDLALFPEDHRIPVAALVDMWAELYRLDDTGIQAMEIINKLGIMNLANVIIPRKDASDTDNNNYNNHFIMLHDILRELGIYRSTKEPFEQRKRLIIDMHKNKSGLTEKQQGLMIRILSKFMRLCVKQNPQQLAARILSVSTDETCALDWSQMEPAQVEVLILNLHTKQYSLPEWIGKMSKLKVLIITNYTVHPSELTNFELLSSLQNLEKIRLERISVPSFATVKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEELNIDYCKDLLVLPTGICDIISLKKLSVTNCHKISSLPEDIGKLENLELLSLSSCTDLEAIPTSIEKLLNLKHLDIS |
HMMPanther: PTHR23155 | 118-702 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | KFTVGLDIPFSKLKMELLRDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQFQISDFKILVTSRVAFPRFSTTCILKPLAHEDAVTLFHHYALMEKNSSDIIDKNLVEKVVRSCQGLPLTIKVIATSLKNRPHDLWRKIVKELSQGHSILDSNTELLTRLQKIFDVLEDNPTIIECFMDLALFPEDHRIPVAALVDMWAELYRLDDTGIQAMEIINKLGIMNLANVIIPRKDASDTDNNNYNNHFIMLHDILRELGIYRSTKEPFEQRKRLIIDMHKNKSGLTEKQQGLMIRILSKFMRLCVKQNPQQLAARILSVSTDETCALDWSQMEPAQVEVLILNLHTKQYSLPEWIGKMSKLKVLIITNYTVHPSELTNFELLSSLQNLEKIRLERISVPSFATVKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEELNIDYCKDLLVLPTGICDIISLKKLSVTNCHKISSLPEDIGKLENLELLSLSSCTDLEAIPTSIEKLLNLKHLDIS |
HMMPfam: PF00931 IPR002182
|
130-392 | NB-ARC,NBS NB-ARC
|
LKMELLRDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQFQISDFKILVTSRVAFPRFSTTCILKPLAHEDAVTLFHHYALMEKNSSDIIDKNLVEKVVRSCQGLPLTIKVIATSLKNRPHDLWRKIVKELSQGHSILDSNTELLTRLQKIFDVLEDNPTIIECFMDLALFPEDHRIPVAALVDMWAE |
Gene3D: G3DSA:3.40.50.300 | 136-244 | G3DSA:3.40.50.300 | RDGSSTLVLTGLGGLGKTTLATKLCWDQEVNGKFMENIIFVTFSKTPMLKTIVERIHEHCGYPVPEFQNDEDAVNRLGLLLKKVEGSPLLLVLDDVWPSSESLVEKLQF |
FPrintScan: PR00364 IPR000767
|
141-156 | DISEASERSIST Disease resistance protein
|
TLVLTGLGGLGKTTLA |
FPrintScan: PR00364 IPR000767
|
218-232 | DISEASERSIST Disease resistance protein
|
KVEGSPLLLVLDDVW |
FPrintScan: PR00364 IPR000767
|
306-320 | DISEASERSIST Disease resistance protein
|
CQGLPLTIKVIATSL |
Gene3D: G3DSA:3.80.10.10 | 531-702 | G3DSA:3.80.10.10 | LNLHTKQYSLPEWIGKMSKLKVLIITNYTVHPSELTNFELLSSLQNLEKIRLERISVPSFATVKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEELNIDYCKDLLVLPTGICDIISLKKLSVTNCHKISSLPEDIGKLENLELLSLSSCTDLEAIPTSIEKLLNLKHLDIS |
superfamily: SSF52047 | 539-702 | SSF52047,LRR | SLPEWIGKMSKLKVLIITNYTVHPSELTNFELLSSLQNLEKIRLERISVPSFATVKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEELNIDYCKDLLVLPTGICDIISLKKLSVTNCHKISSLPEDIGKLENLELLSLSSCTDLEAIPTSIEKLLNLKHLDIS |
FPrintScan: PR00364 IPR000767
|
667-683 | DISEASERSIST Disease resistance protein
|
GKLENLELLSLSSCTDL |
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