PRGDB00050700 (NBS-LRR-like protein CR373)
| NBS-LRR-like protein CR373 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 31616484 (AY310368) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Oryza sativa Indica Group |
DNA Sequence
GGTCCTGGGGGGACGGGGAAAACGACACTTGCTCGATTGGTGTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGCTAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTTCAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAACGATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATTGGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTTATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAAAGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCAAAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCCTTCGCCCGC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR-like protein CR373 | NBS-LRR-like protein CR373 [Oryza sativa (indica cultivar-group)]. | GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFAR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-174 | NB-ARC,NBS NB-ARC
|
GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFA |
| superfamily: SSF52540 | 1-165 | SSF52540 | GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIA |
| HMMPanther: PTHR11017 | 1-174 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFA |
| HMMPanther: PTHR11017:SF28 | 1-174 | PTHR11017:SF28 | GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFA |
| Gene3D: G3DSA:3.40.50.300 | 1-115 | G3DSA:3.40.50.300 | GPGGTGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLS |
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