PRGDB00050701 (NBS-LRR-like protein CR371)

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NBS-LRR-like protein CR371
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 31616482 (AY310367)
Gene Class NL
Domain Type NBS, LRR
Gene Species Oryza sativa Indica Group

Comment?

Oryza sativa (indica cultivar-group) NBS-LRR-like protein CR371 gene, partial cds.

DNA Sequence

GGAATCGGGGGGTGGGGGAAAACGACACTTGCTCGATTGGTGTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGCTAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTTCAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAACGATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATTGGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTTATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAAAGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCAAAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCCTTCGCCGC


Protein sequences

Name Description Sequence
NBS-LRR-like protein CR371 NBS-LRR-like protein CR371 [Oryza sativa (indica cultivar-group)].

GIGGWGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFAA


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017
1-175 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GIGGWGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFAA

superfamily: SSF52540
1-165 SSF52540

GIGGWGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIA

HMMPfam: PF00931
IPR002182
1-174 NB-ARC,NBS
NB-ARC

GIGGWGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFA

HMMPanther: PTHR11017:SF28
1-175 PTHR11017:SF28

GIGGWGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPFAA






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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