PRGDB00050704 (NBS-LRR-like protein CR273)

NBS-LRR-like protein CR273
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	31616476 (AY310364)
Gene Class	NL
Domain Type	NBS, LRR
Gene Species	Oryza sativa Indica Group
	Comment?

Oryza sativa (indica cultivar-group) NBS-LRR-like protein CR273 gene, partial cds.

DNA Sequence

GGGATGGGGGGGATGGGGAAGACGACGCTTGCTAGATTTGTATACCATGATCAAAGAATTAAAGATCATTTTGATTTGCGAATGTGGGTTTGTGTATCCGATAATTTCAATGAGAAGAGCCTAACACGTGAGATTTTAGAGCATGTGTGTAAAGATAGACAAGGCTATGAAAATATAATCGGTTTAGGTGCACTGCAGGATACCCTTTTGGAGAATATTAGATGCAAAAGATTTCTGCTTGTATTGGATGATATGTGGGAAGATGGGGACATGAGTGGATGGGATAATCTGTTAGCTCCATTCAAATGTAATGAAGCAACCGGCTGCATGATTTTAGTGACAACTCGAAGGACATCAGTTGCAAAAAGGATAGGAACAGTGAACAAGGTTGAAGTGAATGGTCTGGATGAAACAGAGTTTTGGTTGCTCTTCAAGGCATGGGCATTTAATGGTTATGAGAACCTGGAGCTTGATCCATTTTTTCAATCCACTGGGAAAGACATTGCTAGAGAACTAAAGGGCAATCCCCTCGCCGC

Protein sequences

Name	Description	Sequence
NBS-LRR-like protein CR273	NBS-LRR-like protein CR273 [Oryza sativa (indica cultivar-group)].	GMGGMGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKSLTREILEHVCKDRQGYENIIGLGALQDTLLENIRCKRFLLVLDDMWEDGDMSGWDNLLAPFKCNEATGCMILVTTRRTSVAKRIGTVNKVEVNGLDETEFWLLFKAWAFNGYENLELDPFFQSTGKDIARELKGNPLAA

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR11017	1-179	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	GMGGMGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKSLTREILEHVCKDRQGYENIIGLGALQDTLLENIRCKRFLLVLDDMWEDGDMSGWDNLLAPFKCNEATGCMILVTTRRTSVAKRIGTVNKVEVNGLDETEFWLLFKAWAFNGYENLELDPFFQSTGKDIARELKGNPLAA
HMMPanther: PTHR11017:SF28	1-179	PTHR11017:SF28	GMGGMGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKSLTREILEHVCKDRQGYENIIGLGALQDTLLENIRCKRFLLVLDDMWEDGDMSGWDNLLAPFKCNEATGCMILVTTRRTSVAKRIGTVNKVEVNGLDETEFWLLFKAWAFNGYENLELDPFFQSTGKDIARELKGNPLAA
HMMPfam: PF00931 IPR002182	1-178	NB-ARC,NBS NB-ARC	GMGGMGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKSLTREILEHVCKDRQGYENIIGLGALQDTLLENIRCKRFLLVLDDMWEDGDMSGWDNLLAPFKCNEATGCMILVTTRRTSVAKRIGTVNKVEVNGLDETEFWLLFKAWAFNGYENLELDPFFQSTGKDIARELKGNPLA
superfamily: SSF52540	1-170	SSF52540	GMGGMGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKSLTREILEHVCKDRQGYENIIGLGALQDTLLENIRCKRFLLVLDDMWEDGDMSGWDNLLAPFKCNEATGCMILVTTRRTSVAKRIGTVNKVEVNGLDETEFWLLFKAWAFNGYENLELDPFFQSTGKDIAR

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Analyses

Blast

Blast matches against Reference R-Genes. Show