PRGDB00050705 (NBS-LRR-like protein CR271)

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NBS-LRR-like protein CR271
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 31616474 (AY310363)
Gene Class NL
Domain Type NBS, LRR
Gene Species Oryza sativa Indica Group

Comment?

Oryza sativa (indica cultivar-group) NBS-LRR-like protein CR271 gene, partial cds.

DNA Sequence

GGAATGGGGGGGGTGGGGAAAACGACTCTGGCCCAGCAAATCTACAAGGATTCGGAAATTGGAAAGTCTGCAATCAAGATATGGATCCATGTATCTGATAAGTTTGACTTGCACAAGGTGACGAGGGAGATTTTGGAGTGTGTCTCCAAGAAGAAGCAAAAAGAAACAAGCAACTTTAATATGCTTCAGCAGGATCTCGAGGAAAATATGAAATCCAAGAGGTTCCTGATTGTTTTGGATGATGTCTGGGATGTCACTACTGACTGTTGGAACAAACTACTGGCTCCTTTAAGAGCTAATCATGTTAATCCGTCAAAGGAAAAAGTGACAGGTAACAGTATGGTCATTGTGACAACTCGAAAAAACACTACTGCCAAGCTTTGTGGAACGGTAGGATCAATTAATTTGGAAGGTCTGAAAGATGATGACATATGGTCACTATTTAAAGCATATGCTTTTGGTAGTGATAAACATAGCAATAATCCAATTTTACAGAATCTTGGGGAGGAAAATAGCTTAGGAGCTAAATGGGCAAACCCTTCGCCGC


Protein sequences

Name Description Sequence
NBS-LRR-like protein CR271 NBS-LRR-like protein CR271 [Oryza sativa (indica cultivar-group)].

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKHSNNPILQNLGEENSLGAKWANPSP


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR23155:SF121
1-101 PTHR23155:SF121,SUBFAMILY NOT NAMED

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANH

Gene3D: G3DSA:3.40.50.300
1-133 G3DSA:3.40.50.300

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGS

superfamily: SSF52540
1-158 SSF52540

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKH

HMMPfam: PF00931
IPR002182
1-169 NB-ARC,NBS
NB-ARC

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKHSNNPILQNLGE

HMMPanther: PTHR23155
1-101 PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GMGGVGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANH






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Analyses

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