PRGDB00050747 (R 11)
| R 11 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 27764534 (AF541963) |
| Gene Class | Unknown |
| Domain Type | LRR |
| Gene Species | Glycine max |
DNA Sequence
ATGGCAGACAACACCCGTATGAAGGAGGTTTATGCAGAATTGAAGAAAAACGCTGATGCGATTACTCGTGTTAGTGACGATCTTCAGAACCATATTGAACGGTTGGAAGCTACAAATCACGCTCAGATGGAGAAGATTGAAGTGATGCAGTCGACGAATGATTCTCAATTCTCACAACTGAATGCAGTAATGTCACAGGTGCTGCAGCGTCTACAAAACATTCCGATGTCTTCCCATGGTGCATCGAACTCACAGAAAGAGCAGCAGAGAAGTTCGTTTCAGGTGAGATCTGTCAAACTTGATTTTCCTCGCTTTGATGGAAAAAATGTGATGGATTGGATATTCAAGGCTGAACAATTTTTCGATTACTATGCAACACCAGATGCTGATAGATTGATTATTGCTTCAGTACATTTAGATCAGGATGTTGTCCCTTGGTATCAAATGCTTCAAAAAACTGAACCATTCAGTTCATGGCAAGCATTTACTAGAGCCTTAGAACTTGATTTTGGACCATCTGCTTATGACTGTCCTCGTGCTACTTTGTTTAAACTGAATCAATCTGCAACTGTGAATGAATATTATATGCAATTCACTGCTCTAGTAAATAGAGTAGATGGATTAAGTGCAGAGGCAATTTTGGATTGCTTTGTTAGTGGGTTGCAGGAAGAAATCAGCAGGGATGTGAAAGCAATGGAACCCCGTACCTTAACCAAGGCAGTTGCATTGGCCAAATTATTTGAAGAAAAATACACTTCACCACCTAAAACAAAAACATTCTCAAACCTAGCCAGAAATTTTACCTCAAACACTTCAGCCACACAGAAATATCCACCAACTAACCAAAAAAATGACAATCCAAAACCAAATTTACCACCACTTCTACCTACACCATCAACCAAACCATTCAACCTTCGAAACCAAAACATCAAAAAAATTTCCCCTGCTGAGATTCAATTGAGAAGAGAAAAGAATCTGTGTTACTTTTGTGATGAAAAATTTTCCCCTGCACACAAGTGTCCTAATAGACAAGTTATGCTGTTACAACTGGAGGAAACAGATGAGGATCAAACTGATGAACAGGTAATGGTGACTGAAGAAGCTAACATGGATGATGATACTCATCATTTGTCCTTAAATGCTATGAGAGGATCAAATGGTGTGGGCACTATTCGATTTACTGGCCAAGTGGGAGGCATAGCAGTTAAGATATTGGTGGATGGAGGTAGCTCTGACAACTTCATTCAGCCTAGAGTGGCTCAGGTGCTTAAGTTACCAGTGGAACCAGCTCCTAATCTTCGAGTTTTAGTGGGAAATGGACAGATTCTGAGTGCAGAAGGAATTGTTCAGCAATTACCATTACATATTCAAGGCCAAGAAGTGAAAGTGCCAGTGTACTTGTTACAAATTTCTGGTGCAGATGTGATATTGGGGTCCACATGGTTAGCAACATTAGGTCCTCATGTAGCTGACTATGCAGCATTGACCTTGAAATTCTTCCAAAATGATAAATTCATTACTTTACAAGGTGAAGGTAATTCAGAAGCAACACAGGCTCAGCTCCATCATTTCAGAAGATTGCAAAACACAAAGTCAATTGAAGAGTGCTTTGCAATACAATTGATTCAGAAGGAAGTACCAGAAGACACTTTGAAGGATTTACCAACAAATATTGATCCTGAATTGGCCATCTTACTCCACACTTATGCTCAAGTGTTTGCAGTACCAGCATCACTGCCACCTCAGAGGGAACAGGATCATGCTATACCACTGAAACAAGGGTCAGGCCCCGTTAAAGTAAGACCATACAGATATCCTCACACACAAAAGGATCAGATTGAAAAGATGATACAAGAAATGTTGGTTCAAGGCATCATTCAACCAAGTAACAGTCCATTTTCCTTACCCATACTGCTTGTTAAGAAGAAAGATGGAAGTTGGAGATTCTGCACAGATTATAGAGCTTTGAATGCAATCACTGTGAAGGATAGCTTTCCAATGCCAACAGTGGATGAACTGCTAGATGAACTACATGGAGCTCAATATTTTTCAAAACTGGATTTGAGGTCAGGATACCATCAAATTCTGGTACAGCCTGAGGATAGAGAGAAAACTGCTTTTAGAACACATCATGGCCATTATGAATGGTTAGTGATGCCATTTGGTCTTACTAATGCACCAGCCACATTCCAATGCTTAATGAACAAAATATTTCAGTTTGCTCTCAGAAAATTTGTTCTTGTGTTTTTTGATGACATCTTGATATATAGTGCTTCTTGGAAGGATCATCTCAAGCACTTGGAATCTGTGCTACAGACCTTGAAGCAACATCAGTTATTTGCTAGATTGTCCAAATGTTCATTTGGAGATACAGAAGTTGATTACTTGGGCCACAAGGTATCTGGGTTAGGAGTTTCCATGGAGAATACAAAGGTACAAGCAGTATTAGATTGGCCTACTCCAAATAATGTCAAGCAGTTAAGGGGATTTCTAGGCTTAACAGGCTATTATAGAAGATTTATTAAATCTTATGCCAATATTGCTGGACCATTAACTGATCTTTTACAAAAAGACAGTTTCTTATGGAATAATGAAGCAGAAGCAGCATTTGTCAAGCTCAAAAAAGCCATGACGGAGGCTCCAGTATTATCACTACCAGATTTTTCTCAACCATTTATTCTGGAAACTGACGCATCAGGTATTGGTGTGGGAGCAGTGTTGGGACAGAATGGCCACCCAATTGCTTATTTTTCAAAAAAATTGGCACCTAGAATGCAGAAACAATCAGCTTATACCAGGGAGTTGCTAGCTATTACTGAGGCTCTATCCAAATTCAGACACTACTTATTAGGCAACAAATTCATTATCAGGACTGATCAAAGAAGTTTGAAAAGTTTGATGGATCAGTCTTTACAAACCCCTGAACAACAAGCTTGGTTACACAAATTCTTAGGGTATGATTTCAAGATTGAATATAAGCCTGGGAAAGATAATCAAGCAGCTGATGCTTTATCAAGAATGTTTATGCTAGCATGGTCAGAACCTCATTCTATCTTCTTGGAAGAATTGAGAGCTAGACTAATTAGTGATCCTCATTTGAAACAGTTGATGGAGACATACAAGCAAGGTGCTGATGCAAGTCATTATACAGTTAGGGAAGGCTTACTGTATTGGAAAGATAGAGTAGTAATACCTGCTGAGGAAGAGATTGTGAACAAAATACTCCAAGAATATCATAGCTCACCTATTGGAGGGCATGCAGGTATAACTAGAACTCTGGCAAGGCTGAAAGCTCAATTCTACTGGCCTAAGATGCAGGAAGATGTCAAAGCTTATATACAGAAATGCTTGATTTGTCAACAAGCTAAATCAAACAATACACTGCCAGCAGGACTACTCCAACCTTTACCTATTCCTCAACAAGTTTGGGAAGATGTAGCCATGGATTTCATCACAGGTTTACCAAATTCCTTTGGATTATCTGTCATAATGGTAGTCATTGATAGACTCACCAAATATGCTCATTTCATTCCATTAAAAGCTGATTATAACAGTAAGGTGGTAGCAGAGGCATTTATGAGTCACATAGTCAAATTACATGGGATACCAAGATCTATAGTGTCTGATCGAGATAGGGTTTTTACCAGTACTTTTTGGCAACATTTATTCAAGTTACAAGGTACTACATTGGCCATGTCATCAGCTTATCATCCACAGTCAGATGGACAATCTGAGGTGCTGAATAAATGTTTGGAGATGTATCTTAGATGCTTCACGTATGAACATCCTAAAGGTTGGGTAAAGGCATTACCATGGGCAGAGTTTTGGTATAACACTGCATATCATATGAGCTTAGGCATGACTCCATTCAGAGCCTTGTATGGGAGAGAGCCTCCTACACTGACCAGGCAAGCCTGTTCTATAGATGATCCTGCTGAAGTGAGGGAACAATTAACTGACAGAGATGCATTGTTAGCTAAGCTTAAAATTAATTTGACAAGAGCACAACAGGTCATGAAGAGACAAGCAGACAAGAAGAGGTTGGATGTGTCATTCCAAATAGGAGATGAGGTACTGGTGAAACTGCAGCCTTATAGACAGCATTCTGCTGTCCTGAGAAAGAATCAAAAGCTGTCCATGAGATACTTTGGACCATTTAAGGTGCTGGCCAAGATTGGTGATGTTGCTTATAAGTTGGAGTTGCCTTCTGCTGCACGAATTCATCCTGTTTTTCATGTGTCCCAGCTGAAGCCATTCAATGGGACTGCTCAAGATCCTTACCTGCCATTGCCTTTGACAGTCACAGAAATGGGACCAGTTATGCAGCCTGTGAAAATACTAGCAAGTCGAATTATCATCAGAGGGCACAATCAGATTGAGCAGATACTAGTGCAGTGGGAGAATGGCTTGCAAGATGAAGCTACTTGGGAGGATATTGAAGATATCAAGGCAAGCTATCCTACCTTCAACCTTGAGGACAAGGTTGTTTTTAAAGGGGAAGGCAATGTAACGAATGGAATGTCACGTGGGGAGAAGGTTAACAATACTGCTGAGTCATCAAGTGAGAGAGGATTGCATAACAAACTTGCTGATTTTGAGGAATTGGGACGTGGGAAGAGAGAGAAGAAACCAAGTTGGAAAATAACGGAATCCCACTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| polyprotein | polyprotein [Glycine max]. | MADNTRMKEVYAELKKNADAITRVSDDLQNHIERLEATNHAQMEKIEVMQSTNDSQFSQLNAVMSQVLQRLQNIPMSSHGASNSQKEQQRSSFQVRSVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDADRLIIASVHLDQDVVPWYQMLQKTEPFSSWQAFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQEEISRDVKAMEPRTLTKAVALAKLFEEKYTSPPKTKTFSNLARNFTSNTSATQKYPPTNQKNDNPKPNLPPLLPTPSTKPFNLRNQNIKKISPAEIQLRREKNLCYFCDEKFSPAHKCPNRQVMLLQLEETDEDQTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKFFQNDKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQLIQKEVPEDTLKDLPTNIDPELAILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAWSEPHSIFLEELRARLISDPHLKQLMETYKQGADASHYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVVFKGEGNVTNGMSRGEKVNNTAESSSERGLHNKLADFEELGRGKREKKPSWKITESH |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR10178:SF14 | 75-1452 | PTHR10178:SF14,RETROVIRUS POLYPROTEIN | PMSSHGASNSQKEQQRSSFQVRSVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDADRLIIASVHLDQDVVPWYQMLQKTEPFSSWQAFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQEEISRDVKAMEPRTLTKAVALAKLFEEKYTSPPKTKTFSNLARNFTSNTSATQKYPPTNQKNDNPKPNLPPLLPTPSTKPFNLRNQNIKKISPAEIQLRREKNLCYFCDEKFSPAHKCPNRQVMLLQLEETDEDQTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKFFQNDKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQLIQKEVPEDTLKDLPTNIDPELAILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAWSEPHSIFLEELRARLISDPHLKQLMETYKQGADASHYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRII |
| HMMPanther: PTHR10178 | 75-1452 | PTHR10178,GAG/POL/ENV POLYPROTEIN | PMSSHGASNSQKEQQRSSFQVRSVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDADRLIIASVHLDQDVVPWYQMLQKTEPFSSWQAFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQEEISRDVKAMEPRTLTKAVALAKLFEEKYTSPPKTKTFSNLARNFTSNTSATQKYPPTNQKNDNPKPNLPPLLPTPSTKPFNLRNQNIKKISPAEIQLRREKNLCYFCDEKFSPAHKCPNRQVMLLQLEETDEDQTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKFFQNDKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQLIQKEVPEDTLKDLPTNIDPELAILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAWSEPHSIFLEELRARLISDPHLKQLMETYKQGADASHYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRII |
| HMMPfam: PF03732 IPR005162
|
134-223 | Retrotrans_gag Retrotransposon gag protein
|
IASVHLDQDVVPWYQMLQKTEPFSSWQAFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQE |
| superfamily: SSF50630 IPR021109
|
383-491 | Pept_Aspartic Peptidase aspartic
|
RGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVAD |
| HMMPfam: PF13650 | 395-481 | Asp_protease_2,Aspartyl protease | GQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTW |
| superfamily: SSF56672 | 564-993 | SSF56672 | ILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYK |
| Gene3D: G3DSA:3.10.10.10 | 587-725 | G3DSA:3.10.10.10 | HAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTN |
| ProfileScan: PS50878 IPR000477
|
621-800 | RT_POL Reverse transcriptase
|
LVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKV |
| HMMPfam: PF00078 IPR000477
|
640-799 | RVT_1 Reverse transcriptase
|
VKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHK |
| Gene3D: G3DSA:3.30.420.10 | 901-1010 | G3DSA:3.30.420.10 | IGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFML |
| ProfileScan: PS50994 IPR001584
|
1133-1297 | INTEGRASE Integrase, catalytic core
|
LQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGRE |
| superfamily: SSF53098 IPR012337
|
1135-1297 | RNaseH_fold Ribonuclease H-like domain
|
PLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGRE |
| Gene3D: G3DSA:3.30.420.10 | 1136-1290 | G3DSA:3.30.420.10 | LPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPF |
| HMMPfam: PF00665 IPR001584
|
1140-1252 | rve Integrase, catalytic core
|
QQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLE |
| superfamily: SSF54160 IPR016197
|
1404-1484 | Chromodomain-like Chromo domain-like
|
AARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKA |
| HMMPfam: PF00385 IPR023780
|
1442-1488 | Chromo Chromo domain
|
QPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPT |
List of References
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