PRGDB00050825 (ys207)

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ys207
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 21263073 (AF510990)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Oryza rufipogon

Comment?

Oryza rufipogon serine/threonine protein kinase (ys207) gene, partial cds.

DNA Sequence

TTTCGGGTCGGTGTACAGGGGTATCCTCGAGGACAACATGGTGGTGGCCATCAAGAAGTCTAAGATGATGGAGGAGGCTGAGACGAAGGAGTTTGCAAGAGAAATGTTCATCCTCTCCCAGATCAACCATCGGAATGTCGTCAAGTTGCTTGGTTGTTGCCTTGAAGTTGAAGTGCCCATGTTGGTCTATGAATTTGTCTCAAACGGCACCCTCTATCACTACATCCATGGCAAAGAACCCAAAGCTAACATAGCACTCGATACCCGTCTTCGAATAGCGGCAGAGTCAGCCGAGGCGCTCTCCTACATGCATTCGTCGGCTTCACCACCAATCCTCCATGGAGATGTCAAGACAGCAAACATCCTACTTGATGACAAGCTCAACGCCAAAGTTTCAGATTTTGGGGCGTCAAAACTAGCACCAACTGATGAGGCCGAGATTGCAACGTTGGTACAGGGAACTTGTGGGTACCTAGACCCTGAATACCTAATGACATGCCAGCTGACCGATAAGAGT


Protein sequences

Name Description Sequence
serine/threonine protein kinase serine/threonine protein kinase [Oryza rufipogon].

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-172 PTHR24420,FAMILY NOT NAMED

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

ProfileScan: PS50011
IPR000719
1-172 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

HMMPfam: PF07714
IPR001245
1-172 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

HMMPanther: PTHR24420:SF444
1-172 PTHR24420:SF444,SUBFAMILY NOT NAMED

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

Gene3D: G3DSA:3.30.200.20
1-51 G3DSA:3.30.200.20

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLG

superfamily: SSF56112
IPR011009
1-172 Kinase_like
Protein kinase-like domain

FGSVYRGILEDNMVVAIKKSKMMEEAETKEFAREMFILSQINHRNVVKLLGCCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDKS

Gene3D: G3DSA:1.10.510.10
52-171 G3DSA:1.10.510.10

CCLEVEVPMLVYEFVSNGTLYHYIHGKEPKANIALDTRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLNAKVSDFGASKLAPTDEAEIATLVQGTCGYLDPEYLMTCQLTDK

PatternScan: PS00108
IPR008271
111-123 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

ILHGDVKTANILL






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Analyses

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