PRGDB00050826 (ys302)

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ys302
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 21263071 (AF510989)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Oryza officinalis

Comment?

Oryza officinalis serine/threonine protein kinase (ys302) gene, partial cds.

DNA Sequence

TTCGGGTCGGTGTACCGGGGGATCTTGAGCGATGGCGGCGTGAGCCGCGATGTCGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAATCTCGTGCCGCTCATCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTTGTCTATGAGCTCATGGCCAATGGCAGCCTCGACGCCCACATCTACAGTCCGGAGAATGTGCTGCCATGGCCGGTCCGGTACGGGGTCGTGCTCGGCGTCGGCGCCGCGCTGCTGTACCTGCACCAGGAGGCGGAGCAGCGCGTCGTCCACCGCGACATCAAGCCGAGCAACGTCATGCTGGACGCGTCGTTCAACGCCAGGCTCGGCGACTTCGGCCTCGCGAGGCTCATCGAAGACGGCCGGCGTTCGCACACGACGGACATCGCCGGCACGATGGGGTACATCGACGCCGAGTGCATCCTCGCCGGGAAGGCCAGCGTCGAGTCCGACGTCTACAGCTACGGCATA


Protein sequences

Name Description Sequence
serine/threonine protein kinase serine/threonine protein kinase [Oryza officinalis].

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-181 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

HMMPfam: PF00069
IPR000719
1-181 Pkinase,Ser-thr
Protein kinase, catalytic domain

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

superfamily: SSF56112
IPR011009
1-181 Kinase_like
Protein kinase-like domain

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

HMMPanther: PTHR24420:SF438
1-181 PTHR24420:SF438,SUBFAMILY NOT NAMED

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

HMMPanther: PTHR24420
1-181 PTHR24420,FAMILY NOT NAMED

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDELLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

Gene3D: G3DSA:3.30.200.20
1-62 G3DSA:3.30.200.20

FGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLIGWCHDGGDE

Gene3D: G3DSA:1.10.510.10
63-181 G3DSA:1.10.510.10

LLLVYELMANGSLDAHIYSPENVLPWPVRYGVVLGVGAALLYLHQEAEQRVVHRDIKPSNVMLDASFNARLGDFGLARLIEDGRRSHTTDIAGTMGYIDAECILAGKASVESDVYSYGI

PatternScan: PS00108
IPR008271
113-125 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VVHRDIKPSNVML






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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