PRGDB00050869 (YK35)
YK35 | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 7243673 (AF230515) |
Gene Class | Unknown |
Domain Type | Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase |
Gene Species | Oryza sativa Japonica Group |
DNA Sequence
TTTGGGAAGGTGTACCGGGGGGTGCTTCCTAACTCTAGACTAGAAGTTGCTATAAAGCGGGTTTCGTATGAATCGAAGCAAGGTATAAAAGAATTTGTCGCTGAAGTTGTAAGTATAGGCCATCTTCAACACCGCAATGTTGTGAAATTGCTTGGATATTGTAGGAGAAAAGGTGAACTTTTTCTTGTGTATGACTACATGGCAAATGGAAGTCTAGACAAATACTTGTATCGACAAGAGGGCAAACCAACTTTAAATTGGGGACAAAGGTTTCAAATTATCAAAGACATTGCATCTGGTTTGCTCTACCTCCATGAAGGATGGGATAAAGTTGTCATTCATCGTGATGTCAAGGCGAGCAATGTGCTTCTCGACAAACAACTGAATGGACGACTGGGAGATTTCGGTCTTGCAAGATTATATGACCACGGCACTGACCCACAAACCACACATGTTGTTGGCACAATAGGATACCTAGCTCCAGAGCTAGTACACAGAGGAAAGG
Protein sequences
Name | Description | Sequence |
---|---|---|
serine/threonine protein kinase | serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)]. | FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF56112 IPR011009
|
1-168 | Kinase_like Protein kinase-like domain
|
FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK |
ProfileScan: PS50011 IPR000719
|
1-168 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK |
HMMPfam: PF00069 IPR000719
|
1-165 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVH |
HMMPanther: PTHR24420 | 1-168 | PTHR24420,FAMILY NOT NAMED | FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK |
Gene3D: G3DSA:3.30.200.20 | 1-54 | G3DSA:3.30.200.20 | FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYC |
HMMPanther: PTHR24420:SF435 | 1-168 | PTHR24420:SF435,SUBFAMILY NOT NAMED | FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK |
Gene3D: G3DSA:1.10.510.10 | 55-166 | G3DSA:1.10.510.10 | RRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHR |
PatternScan: PS00108 IPR008271
|
112-124 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIHRDVKASNVLL |
List of Contributions
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