PRGDB00050869 (YK35)

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YK35
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 7243673 (AF230515)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Oryza sativa Japonica Group

Comment?

Oryza sativa subsp. japonica serine/threonine protein kinase (YK35) gene, partial cds.

DNA Sequence

TTTGGGAAGGTGTACCGGGGGGTGCTTCCTAACTCTAGACTAGAAGTTGCTATAAAGCGGGTTTCGTATGAATCGAAGCAAGGTATAAAAGAATTTGTCGCTGAAGTTGTAAGTATAGGCCATCTTCAACACCGCAATGTTGTGAAATTGCTTGGATATTGTAGGAGAAAAGGTGAACTTTTTCTTGTGTATGACTACATGGCAAATGGAAGTCTAGACAAATACTTGTATCGACAAGAGGGCAAACCAACTTTAAATTGGGGACAAAGGTTTCAAATTATCAAAGACATTGCATCTGGTTTGCTCTACCTCCATGAAGGATGGGATAAAGTTGTCATTCATCGTGATGTCAAGGCGAGCAATGTGCTTCTCGACAAACAACTGAATGGACGACTGGGAGATTTCGGTCTTGCAAGATTATATGACCACGGCACTGACCCACAAACCACACATGTTGTTGGCACAATAGGATACCTAGCTCCAGAGCTAGTACACAGAGGAAAGG


Protein sequences

Name Description Sequence
serine/threonine protein kinase serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)].

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
1-168 Kinase_like
Protein kinase-like domain

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK

ProfileScan: PS50011
IPR000719
1-168 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK

HMMPfam: PF00069
IPR000719
1-165 Pkinase,Ser-thr
Protein kinase, catalytic domain

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVH

HMMPanther: PTHR24420
1-168 PTHR24420,FAMILY NOT NAMED

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK

Gene3D: G3DSA:3.30.200.20
1-54 G3DSA:3.30.200.20

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYC

HMMPanther: PTHR24420:SF435
1-168 PTHR24420:SF435,SUBFAMILY NOT NAMED

FGKVYRGVLPNSRLEVAIKRVSYESKQGIKEFVAEVVSIGHLQHRNVVKLLGYCRRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHRGK

Gene3D: G3DSA:1.10.510.10
55-166 G3DSA:1.10.510.10

RRKGELFLVYDYMANGSLDKYLYRQEGKPTLNWGQRFQIIKDIASGLLYLHEGWDKVVIHRDVKASNVLLDKQLNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELVHR

PatternScan: PS00108
IPR008271
112-124 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VIHRDVKASNVLL






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