PRGDB00050880 (YK13)
| YK13 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 7243651 (AF230504) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
TTCGGGTCGGGTGTACCAGGGTGTTCTACTCCCAGGCAATATCCATGTTGCTGTCAAGATACTGGCCAACCATAGTTGTGACGGAGAAGAATTCATCAACGAGGTCTCCACCATTGGTAGTATCCATCATGTTAATGTTGTGTCGTTGGTGGGCTTTTGTGCCGAGGAAACAAGGAGAGCACTTGTGTACGAGTACATGCCCAATGGATCTCTGGAGAAGTACATCTTCTCGCCTGAGAAGAGTTTCTCTTGGGAAAAGCTCAATGAGATTGCACTGGGAATTGCTAGAGGAATAAACTATTTGCACCGAGGGTGTGAGATGCAAATTCTACATTTTGATATCAAGCCGCACAACATCCTTCTTGACAGCAAGTTCATTCCAAAAGTTGCTGATTTTGGCCTTGCCAAACTGTACCCACAGGATAATAGTTTTGTGCCTGTTAGTGCTGCACGAGGAACAATAGGTTATATTGCTCCTGAGATGATATCTTGGAGCTTTGGTGTCATATCTAGCAAATCTGACATCTACTCCTTTGGCATA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| serine/threonine protein kinase | serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)]. | SGRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-180 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
SGRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| HMMPanther: PTHR24420:SF441 | 2-180 | PTHR24420:SF441,SUBFAMILY NOT NAMED | GRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| superfamily: SSF56112 IPR011009
|
2-180 | Kinase_like Protein kinase-like domain
|
GRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| HMMPanther: PTHR24420 | 2-180 | PTHR24420,FAMILY NOT NAMED | GRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| Gene3D: G3DSA:3.30.200.20 | 2-53 | G3DSA:3.30.200.20 | GRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFC |
| HMMPfam: PF00069 IPR000719
|
2-180 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
GRVYQGVLLPGNIHVAVKILANHSCDGEEFINEVSTIGSIHHVNVVSLVGFCAEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| Gene3D: G3DSA:1.10.510.10 | 54-180 | G3DSA:1.10.510.10 | AEETRRALVYEYMPNGSLEKYIFSPEKSFSWEKLNEIALGIARGINYLHRGCEMQILHFDIKPHNILLDSKFIPKVADFGLAKLYPQDNSFVPVSAARGTIGYIAPEMISWSFGVISSKSDIYSFGI |
| PatternScan: PS00108 IPR008271
|
109-121 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
ILHFDIKPHNILL |
List of Contributions
There has not been any contribution yet.
