PRGDB00050882 (YK3)

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YK3
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 7243647 (AF230502)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Oryza sativa Japonica Group

Comment?

Oryza sativa subsp. japonica serine/threonine protein kinase (YK3) gene, partial cds.

DNA Sequence

TTTGGGGAGGTGTATCGGGGGACTCTTGAAGACAATACTACGGTTGCTGTGAAGACGTCAATTGAGGTAAATGAAGCTCGAAAGGATGATTTCACAAATGAAGTGATCATCCAATCGCAAATGATGCATAATAACATTATCAAGCTTTTGGGTTGTTGCTTGGAAGTGGATGTTCCAATGTTGGTGTATGAGTTTGCCGCTAAGGGAAATCTTCAGGACATTCTCCATGGTGATGCCAACATCCCTCTCCCGTTGGGCTTACGCCTAAACATCGCAATTGAATCAGCTGAAGGTCTAAGGTACATGCACTCATCAACAAGTCGTACCATACGACATGGTGATGTCAAGCCAGCCAACATACTTTTAACAGATAAGTTTATCCCCAAGATCTCATATTTTGGGACATCTAAGCTTCTTACTGTAGACAAAGATTTCACCATGTTTGTTGTAGGAAGCATGGGCTACATAGATCCAGTATTCCATAAGACCGGCCATTTAACACAAAAGAGTGACATCTACAGTTACGGCATA


Protein sequences

Name Description Sequence
serine/threonine protein kinase serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)].

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

Domains

Domain Start-End Description Sequence

HMMPfam: PF07714
IPR001245
1-177 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

ProfileScan: PS50011
IPR000719
1-177 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

HMMPanther: PTHR24420:SF444
1-177 PTHR24420:SF444,SUBFAMILY NOT NAMED

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

HMMPanther: PTHR24420
1-177 PTHR24420,FAMILY NOT NAMED

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

superfamily: SSF56112
IPR011009
1-177 Kinase_like
Protein kinase-like domain

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

Gene3D: G3DSA:3.30.200.20
1-52 G3DSA:3.30.200.20

FGEVYRGTLEDNTTVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGC

Gene3D: G3DSA:1.10.510.10
53-177 G3DSA:1.10.510.10

CLEVDVPMLVYEFAAKGNLQDILHGDANIPLPLGLRLNIAIESAEGLRYMHSSTSRTIRHGDVKPANILLTDKFIPKISYFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDIYSYGI

PatternScan: PS00108
IPR008271
110-122 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IRHGDVKPANILL






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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