PRGDB00050902 (putative Pto-like serine/threonine kinase)

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putative Pto-like serine/threonine kinase
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 15054774 (AF288562)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Solanum tuberosum

Comment?

Solanum tuberosum tbr4D putative Pto-like serine/threonine kinase gene, partial cds.

DNA Sequence

TTTAAACTCGAGTTATCGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAACAACTTCGATGAGAAGTTTCACATTGGATTGGGTGGCTTTGGGAAAGTTTACAGGGGTGTTTTGCGTGATGGAACAAAGGTGGCCCTGAAGAGGTGTAAGCGTGAGTCCTCACAAGGTATTGAAGAGTTCCGAACAGAAATTGAGATTCTCTCTTTTTGCAGCCATCCGCATTTGGTTTCATTGATAGGATACTGTGATGAAACAAATGTGATGATTCTAGTTTATGACTACATTGAGAATGGGAACCTCAGGAGCCATTTGTATGGCCCAGATCTRCCCACTATGAGCTGGGAGCAGGGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTGCATTACCTTCATACTAGCGCAGTTATACATCGTGATGTCAAGTCTATAAACATATTGCTTGATGAGAATTTTGTGGCAAAAATTACTGATTTTGGAATATCCAAGAAAGGGACTGAGCTTGATCAAACCCATCTTAGCACCCTYGTGCAAGGAACTATMGGCTACCTTGACCCTGAATATTTTTTAAGGGGACAACTGACAGAAAAATCTGATGTCTATTCTTTCGGTGTKGTTTTATTYGAAGTTCTTTTTGCTAGGCCTGCCATAGTTCAATCTCTTCCAAGGGAGATGGTTAGTTTAGCTGAATGGGCAGTGGACTCACATAATAAGGGACAGTTGGAACAAATTGTTGATCCCGATCTTGCAGCCAAAATAAGACCAGAGTCCCTCAGGAAATTTGGTGAAACAGCGGTGAAATGTTTAGCTTTGTCTAGTGAAGATAGGCCATCAATGGGTGATGTGTTG


Protein sequences

Name Description Sequence
putative Pto-like serine/threonine kinase putative Pto-like serine/threonine kinase [Solanum tuberosum].

LNSSYRVPFESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
1-290 Kinase_like
Protein kinase-like domain

LNSSYRVPFESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

HMMPanther: PTHR24420
10-290 PTHR24420,FAMILY NOT NAMED

ESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

HMMPanther: PTHR24420:SF785
10-290 PTHR24420:SF785

ESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

Gene3D: G3DSA:3.30.200.20
14-102 G3DSA:3.30.200.20

VPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYI

ProfileScan: PS50011
IPR000719
26-290 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

HMMPfam: PF07714
IPR001245
31-288 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

HIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFRTEIEILSFCSHPHLVSLIGYCDETNVMILVYDYIENGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGD

PatternScan: PS00107
IPR017441
32-54 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

IGLGGFGKVYRGVLRDGTKVALK

Gene3D: G3DSA:1.10.510.10
104-290 G3DSA:1.10.510.10

NGNLRSHLYGPDLPTMSWEQGLEICIGAARGLHYLHTSAVIHRDVKSINILLDENFVAKITDFGISKKGTELDQTHLSTLVQGTIGYLDPEYFLRGQLTEKSDVYSFGVVLFEVLFARPAIVQSLPREMVSLAEWAVDSHNKGQLEQIVDPDLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVL

PatternScan: PS00108
IPR008271
143-155 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VIHRDVKSINILL


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Analyses

Blast

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