PRGDB00050908 (putative Pto-like serine/threonine kinase)

From PRG Wiki
Jump to: navigation, search
putative Pto-like serine/threonine kinase
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 15054762 (AF288556)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Solanum sucrense

Comment?

Solanum sucrense scrDG1 putative Pto-like serine/threonine kinase gene, partial cds.

DNA Sequence

CTAGTATGAGCTGGGAGCAGAGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTGCACTACCTTCATACTAACGCAGTTATACATCGTGATGTCAAGTCTTTAAACATATTGCTTGATGAGAATTTTGTGGCAAAAATTAGTGATTTTGGAATATCCAAGAAAGGGACTGAGCCTGATCAAACCCGTGTTACCACAAACGTAAAGGGAACTGTGCCATACCTTGACCCTGAATATTATTTTAGTAGTCTGGTGACAGAAAAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTTGAAGTTCTTTGTGCTAGGCCTGCCATAGATTCATCTCGTTCGAGGGGGATGTTCAGCTTAGCTAATTGGGCAATGGAGTGTCAGAAGAATGGACAGTTGGAACGAATTATAGATCCCAATCTTGTTGGCAAAATAAGACCAGATTCCCTCAGGAAGTTTGGAGAAACAGCAGTGAAATGCTTAGCTGATTATGGTGTAGATAGGCCATCAATGGGTGATGTGCTG


Protein sequences

Name Description Sequence
putative Pto-like serine/threonine kinase putative Pto-like serine/threonine kinase [Solanum sucrense].

SMSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420:SF785
1-173 PTHR24420:SF785

SMSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

ProfileScan: PS50011
IPR000719
1-173 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

SMSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

HMMPanther: PTHR24420
1-173 PTHR24420,FAMILY NOT NAMED

SMSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

HMMPfam: PF00069
IPR000719
2-170 Pkinase,Ser-thr
Protein kinase, catalytic domain

MSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMG

superfamily: SSF56112
IPR011009
2-173 Kinase_like
Protein kinase-like domain

MSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

Gene3D: G3DSA:1.10.510.10
2-173 G3DSA:1.10.510.10

MSWEQRLEICIGAARGLHYLHTNAVIHRDVKSLNILLDENFVAKISDFGISKKGTEPDQTRVTTNVKGTVPYLDPEYYFSSLVTEKSDVYSFGVVLFEVLCARPAIDSSRSRGMFSLANWAMECQKNGQLERIIDPNLVGKIRPDSLRKFGETAVKCLADYGVDRPSMGDVL

PatternScan: PS00108
IPR008271
26-38 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VIHRDVKSLNILL


List of References

V G Vleeshouwers, A Martens, W van Dooijeweert, L T Colon, F Govers, S Kamoun
Ancient diversification of the Pto kinase family preceded speciation in Solanum.
Mol. Plant Microbe Interact.: 2001, 14(8);996-1005
PubMed:11497472 WorldCat.org DOI (P p)





List of Contributions

There has not been any contribution yet.


Analyses

Blast

Blast matches against Reference R-Genes. Show


Personal tools
Namespaces

Variants
Actions
PRGDB
META-SPECIES
Wiki
Toolbox