PRGDB00050965 (RTM2)
| RTM2 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 30680686 (NM_120571) |
| Gene Class | Other |
| Domain Type | |
| Chromosome | 5 |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGCAGCGAGACAGCAACAAAAAGGAACAGGCTTCGGGGTTCAATACGAGGACTTTGTCCCCAAATCCGAATGGAAAGATCAACCTGAAGCCACCATTCTCAACATTGACCTAACAGGTTTTGCAAAGGAGCAAATGAAAGTGACGTATGTGCACAGCTCGAAGATGATAAGAGTCACTGGAGAACGTCCCTTGGCTAATCGGAAATGGAGCCGTTTCAACGAGGTGTTCACTGTTCCACAGAATTGTTTAGTGGATAAGATCCATGGGAGCTTTAAGAACAATGTCCTCACCATCACCATGCCTAAGGAGACGATCACGAAGGTGGCTTATCTTCCAGAAACTTCTAGAACTGAAGCTGCTGCTCTGGAGAAGGCGGCGAAGCTAGAGGAGAAGAGATTGTTAGAAGAATCTAGAAGGAAAGAGAAGGAAGAAGAAGAAGCTAAGCAGATGAAGAAGCAGCTTCTGGAAGAGAAAGAGGCGCTAATTAGGAAGCTGCAAGAAGAAGCTAAAGCAAAGGAAGAGGCTGAAATGAGGAAGCTTCAAGAAGAAGCTAAAGCAAAGGAGGAGGCCGCGGCAAAGAAGCTTCAAGAAGAAATTGAAGCAAAAGAGAAACTTGAGGAGAGAAAGCTCGAGGAAAGGAGACTTGAGGAGAGGAAGCTCGAGGATATGAAGCTTGCGGAAGAAGCTAAACTAAAGAAGATCCAGGAGAGAAAGTCTGTTGATGAATCTGGAGAAAAAGAGAAGATACTAAAGCCAGAAGTGGTCTATACAAAATCCGGGCACGTGGCTACTCCCAAACCTGAGTCGGGGTCTGGTCTCAAGTCCGGGTTTGGAGGAGTAGGCGAGGTGGTGAAGTCAGCGGAAGAAAAACTAGGAAACTTGGTGGAAAAGGAAAAGAAAATGGGGAAAGGGATAATGGAGAAAATAAGAAGGAAAGAGATAACAAGTGAAGAGAAGAAGTTGATGATGAATGTAGGAGTGGCTGCTCTTGTTATCTTTGCTCTCGGAGCTTATGTTTCTTATACCTTCTGCTCTTCTTCTTCTTCTTCTTCCTCTTCGTCTCCTTCTTCATCATCATCTTCTACCAAACCAGAATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| RTM2 (RESTRICTED TEV MOVEMENT 2) | RTM2 (RESTRICTED TEV MOVEMENT 2) [Arabidopsis thaliana]. | MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDESGEKEKILKPEVVYTKSGHVATPKPESGSGLKSGFGGVGEVVKSAEEKLGNLVEKEKKMGKGIMEKIRRKEITSEEKKLMMNVGVAALVIFALGAYVSYTFCSSSSSSSSSSPSSSSSSTKPE |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11527 | 12-212 | PTHR11527,SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY | FGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLE |
| HMMPanther: PTHR11527:SF45 | 12-212 | PTHR11527:SF45,RTM2 (RESTRICTED TEV MOVEMENT 2) | FGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLE |
| Gene3D: G3DSA:2.60.40.790 | 15-107 | G3DSA:2.60.40.790 | QYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETIT |
| superfamily: SSF49764 IPR008978
|
19-108 | HSP20_chap HSP20-like chaperone
|
FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITK |
| ProfileScan: PS01031 IPR002068
|
24-103 | HSP20 Heat shock protein Hsp20
|
EWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPK |
| HMMPfam: PF00011 IPR002068
|
24-105 | HSP20 Heat shock protein Hsp20
|
EWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Synergistic Disease Syndromes | Tobacco etch virus |
List of Contributions
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