PRGDB00050965 (RTM2)
RTM2 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 30680686 (NM_120571) |
Gene Class | Other |
Domain Type | |
Chromosome | 5 |
Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGCAGCGAGACAGCAACAAAAAGGAACAGGCTTCGGGGTTCAATACGAGGACTTTGTCCCCAAATCCGAATGGAAAGATCAACCTGAAGCCACCATTCTCAACATTGACCTAACAGGTTTTGCAAAGGAGCAAATGAAAGTGACGTATGTGCACAGCTCGAAGATGATAAGAGTCACTGGAGAACGTCCCTTGGCTAATCGGAAATGGAGCCGTTTCAACGAGGTGTTCACTGTTCCACAGAATTGTTTAGTGGATAAGATCCATGGGAGCTTTAAGAACAATGTCCTCACCATCACCATGCCTAAGGAGACGATCACGAAGGTGGCTTATCTTCCAGAAACTTCTAGAACTGAAGCTGCTGCTCTGGAGAAGGCGGCGAAGCTAGAGGAGAAGAGATTGTTAGAAGAATCTAGAAGGAAAGAGAAGGAAGAAGAAGAAGCTAAGCAGATGAAGAAGCAGCTTCTGGAAGAGAAAGAGGCGCTAATTAGGAAGCTGCAAGAAGAAGCTAAAGCAAAGGAAGAGGCTGAAATGAGGAAGCTTCAAGAAGAAGCTAAAGCAAAGGAGGAGGCCGCGGCAAAGAAGCTTCAAGAAGAAATTGAAGCAAAAGAGAAACTTGAGGAGAGAAAGCTCGAGGAAAGGAGACTTGAGGAGAGGAAGCTCGAGGATATGAAGCTTGCGGAAGAAGCTAAACTAAAGAAGATCCAGGAGAGAAAGTCTGTTGATGAATCTGGAGAAAAAGAGAAGATACTAAAGCCAGAAGTGGTCTATACAAAATCCGGGCACGTGGCTACTCCCAAACCTGAGTCGGGGTCTGGTCTCAAGTCCGGGTTTGGAGGAGTAGGCGAGGTGGTGAAGTCAGCGGAAGAAAAACTAGGAAACTTGGTGGAAAAGGAAAAGAAAATGGGGAAAGGGATAATGGAGAAAATAAGAAGGAAAGAGATAACAAGTGAAGAGAAGAAGTTGATGATGAATGTAGGAGTGGCTGCTCTTGTTATCTTTGCTCTCGGAGCTTATGTTTCTTATACCTTCTGCTCTTCTTCTTCTTCTTCTTCCTCTTCGTCTCCTTCTTCATCATCATCTTCTACCAAACCAGAATGA
Protein sequences
Name | Description | Sequence |
---|---|---|
RTM2 (RESTRICTED TEV MOVEMENT 2) | RTM2 (RESTRICTED TEV MOVEMENT 2) [Arabidopsis thaliana]. | MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDESGEKEKILKPEVVYTKSGHVATPKPESGSGLKSGFGGVGEVVKSAEEKLGNLVEKEKKMGKGIMEKIRRKEITSEEKKLMMNVGVAALVIFALGAYVSYTFCSSSSSSSSSSPSSSSSSTKPE |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR11527 | 12-212 | PTHR11527,SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY | FGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLE |
HMMPanther: PTHR11527:SF45 | 12-212 | PTHR11527:SF45,RTM2 (RESTRICTED TEV MOVEMENT 2) | FGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIEAKEKLEERKLE |
Gene3D: G3DSA:2.60.40.790 | 15-107 | G3DSA:2.60.40.790 | QYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETIT |
superfamily: SSF49764 IPR008978
|
19-108 | HSP20_chap HSP20-like chaperone
|
FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITK |
ProfileScan: PS01031 IPR002068
|
24-103 | HSP20 Heat shock protein Hsp20
|
EWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPK |
HMMPfam: PF00011 IPR002068
|
24-105 | HSP20 Heat shock protein Hsp20
|
EWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Synergistic Disease Syndromes | Tobacco etch virus |
List of Contributions
There has not been any contribution yet.