PRGDB00061433 (Mla6)

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Mla6
Gene Type Reference_R-Genes,_manually_curated
GenBank 12957125 (AJ302293)
Gene Class CNL
Domain Type NBS, LRR, Others
Gene Species Hordeum vulgare subsp. vulgare

Comment?

Hordeum vulgare Mla6 gene, exons 1-5.

DNA Sequence

ATGGATATTGTCACCGGTGCCATTTCCAACCTGATTCCCAAGTTGGGGGAGCTGCTCACGGAGGAGTTCAAGCTGCACAAGGGTGTCAAGAAAAATATTGAGGACCTCGGGAAGGAGCTTGAGAGCATGAACGCTGCCCTCATCAAGATTGGTGAGGTGCCGAGGGAGCAGCTCGACAGCCAAGACAAGCTCTGGGCCGATGAGGTCAGAGAGCTCTCCTACGTCATTGAGGATGTCGTCGACAAATTCCTCGTACAGGTTGATGGCATTCAGTCTGATGATAACAACAACAAATTTAAGGGGCTCATGAAGAGGACGACCGAGTTGTTGAAGAAAGTCAAGCATAAGCATGGGATAGCTCACGCGATCAAGGACATCCAAGAGCAACTCCAAAAGGTGGCTGATAGGCGTGACAGGAACAAGGTATTTGTTCCTCATCCTACGAGACCAATTGCTATTGACCCTTGCCTTCGAGCTTTGTATGCTGAAGCGACAGAGCTAGTTGGCATATATGGAAAGAGGGATCAAGACCTCATGAGGTTGCTTTCCATGGAGGGCGATGATGCCTCTAATAAGAGACTGAAGAAGGTCTCCATTGTTGGATTTGGAGGGTTGGGCAAGACCACTCTTGCTAGAGCGGTATACGAGAAGATTAAAGGTGATTTTGATTGTCGGGCATTTGTTCCGGTCGGTCAGAACCCTGACATGAAGAAGGTTTTAAGGGATATCCTCATTGATCTCGGAAATCCTCACTCAGATCTTGCGATGCTGGATGCCAATCAGCTTATTAAAAAGCTTCATGAATTTCTAGAGAACAAAAGGTATCTTGTCATAATTGATGATATATGGGATGAAAAATTGTGGGAAGGCATCAACTTTGCTTTCTCCAATAGGAATAATCTAGGCAGTCGACTAATCACCACAACCCGCATTGTCAGTGTCTCTAATTCATGTTGCTCATCAGATGGTGATTCAGTTTATCAAATGGAACCGCTTTCTGTTGATGACTCTAGAATGCTCTTCTCCAAAAGAATATTTCCTGATGAGAATGGATGTATAAATGAATTTGAACAAGTATCCAGAGATATTCTAAAGAAATGTGGTGGGGTACCACTAGCCATAATTACTATAGCTAGTGCTTTGGCTGGTGACCAGAAGATGAAACCAAAATGTGAGTGGGATATTCTCCTTCGGTCCCTTGGCTCTGGACTAACAGAAGATAACAGTTTAGAGGAGATGCGGAGAATACTCTCTTTCAGCTATTCTAATCTACCTTCGCATCTGAAAACTTGTCTACTGTATCTATGTGTATATCCAGAAGATAGTATGATTTCTAGAGATAAACTGATATGGAAGTGGGTGGCTGAAGGATTTGTCCACCATGAAAATCAAGGAAATAGCCTGTATTTGCTCGGATTAAATTACTTCAACCAGCTCATTAATAGAAGTATGATCCAGCCAATATATAATTATAGCGGCGAGGCATATGCTTGCCGTGTACATGATATGGTTCTGGACCTTATCTGCAACTTGTCATATGAAGCAAAGTTTGTGAATCTATTGGATGGCACTGGGAATAGCATGTCTTCACAGAGTAATTGTCGCCGTTTGTCCCTTCAAAAAAGAAATGAAGATCATCAAGTCAGGCCTTTCACAGATATCAAGAGTATGTCACGAGTGAGGTCAATTACTATCTTTCCATCTGCTATTGAAGTCATGCCATCTCTTTCAAGGTTTGACGTTTTACGTGTACTTGATCTGTCACGATGTAATCTTGGGGAGAATAGCAGCCTGCAGCTTAACCTCAAGGATGTTGGACATTTAACTCACCTAAGGTACCTTGGTCTAGAAGGTACCAACATCAGTAAGCTCCCTGCTGAGATAGGAAAACTGCAGTTTTTGGAGGTGTTGGATCTTGGAAACAATCGTAATATAAAGGAATTGCCGTCCACAGTTTGTAATTTCAGAAGATTAATCTACCTAAATTTAGTTGGCTGTCAGGTGGTTCCTCCAGTTGGTTTGTTGCAAAATCTAACAGCCATAGAAGTGTTGAGGGGTATCTTGGTCTCTCTGAACATTATTGCACAAGAGCTTGGCAAGTTGAAAAGTATGAGGGAGCTTGAGATTCGCTTCAATGATGGTAGTTTGGATTTGTATGAAGGTTTCGTGAAGTCTCTTTGCAACTTACATCACATAGAAAGCCTAATCATTGGTTGCAATTCTAGAGAAACATCATCTTTTGAAGTGATGGATCTCTTGGGAGAACGGTGGGTGCCTCCTGTACATCTCCGTGAATTTGAGTCGTCCATGCCTAGCCAACTCTCTGCACTGCGAGGGTGGATAAAGAGAGACCCCTCCCATCTCTCAAACCTCTCCGACTTAGTCCTGCCAGTGAAGGAAGTGCAACAGGATGACGTGGAAATCATTGGGGGGTTGCTGGCCCTTCGCCGTCTCTGGATAAAGAGCAACCACCAAACACAACGGCTGCTAGTCATCCCTGTAGATGGGTTCCACTGTATTGTTGACTTTCAGTTGGACTGTGGATCTGCCACGCAGATATTGTTTGAGCCTGGAGCTTTGCCGAGGGCAGAATCAGTTGTGATCAGTCTGGGCGTGCGGGTGGCGAAAGAGGATGGTAACCGTGGCTTCGACTTGGGCCTGCAAGGGAACTTGCTATCCCTTCGGCGGCATGTCTTTGTTCTTATCTATTGTGGTGGAGCGAGGGTTGGGGAGGCAAAGGAAGCGAAGGCTGCGCTGAGGCGTGCCCAGGAAGCTCATCCCGACCATCTCCGGATTTATATTGACATGAGGCCGTGTATAGCAGAAGGTGCTCATGATGACGATTTGTGTGAGGGCGAGGAGGAGAACTAA


Protein sequences

Name Description Sequence
MLA6 protein MLA6 protein [Hordeum vulgare subsp. vulgare].

MDIVTGAISNLIPKLGELLTEEFKLHKGVKKNIEDLGKELESMNAALIKIGEVPREQLDSQDKLWADEVRELSYVIEDVVDKFLVQVDGIQSDDNNNKFKGLMKRTTELLKKVKHKHGIAHAIKDIQEQLQKVADRRDRNKVFVPHPTRPIAIDPCLRALYAEATELVGIYGKRDQDLMRLLSMEGDDASNKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKLWEGINFAFSNRNNLGSRLITTTRIVSVSNSCCSSDGDSVYQMEPLSVDDSRMLFSKRIFPDENGCINEFEQVSRDILKKCGGVPLAIITIASALAGDQKMKPKCEWDILLRSLGSGLTEDNSLEEMRRILSFSYSNLPSHLKTCLLYLCVYPEDSMISRDKLIWKWVAEGFVHHENQGNSLYLLGLNYFNQLINRSMIQPIYNYSGEAYACRVHDMVLDLICNLSYEAKFVNLLDGTGNSMSSQSNCRRLSLQKRNEDHQVRPFTDIKSMSRVRSITIFPSAIEVMPSLSRFDVLRVLDLSRCNLGENSSLQLNLKDVGHLTHLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNRNIKELPSTVCNFRRLIYLNLVGCQVVPPVGLLQNLTAIEVLRGILVSLNIIAQELGKLKSMRELEIRFNDGSLDLYEGFVKSLCNLHHIESLIIGCNSRETSSFEVMDLLGERWVPPVHLREFESSMPSQLSALRGWIKRDPSHLSNLSDLVLPVKEVQQDDVEIIGGLLALRRLWIKSNHQTQRLLVIPVDGFHCIVDFQLDCGSATQILFEPGALPRAESVVISLGVRVAKEDGNRGFDLGLQGNLLSLRRHVFVLIYCGGARVGEAKEAKAALRRAQEAHPDHLRIYIDMRPCIAEGAHDDDLCEGEEEN

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR23155:SF217
4-894 PTHR23155:SF217,OS11G0657900 PROTEIN

VTGAISNLIPKLGELLTEEFKLHKGVKKNIEDLGKELESMNAALIKIGEVPREQLDSQDKLWADEVRELSYVIEDVVDKFLVQVDGIQSDDNNNKFKGLMKRTTELLKKVKHKHGIAHAIKDIQEQLQKVADRRDRNKVFVPHPTRPIAIDPCLRALYAEATELVGIYGKRDQDLMRLLSMEGDDASNKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKLWEGINFAFSNRNNLGSRLITTTRIVSVSNSCCSSDGDSVYQMEPLSVDDSRMLFSKRIFPDENGCINEFEQVSRDILKKCGGVPLAIITIASALAGDQKMKPKCEWDILLRSLGSGLTEDNSLEEMRRILSFSYSNLPSHLKTCLLYLCVYPEDSMISRDKLIWKWVAEGFVHHENQGNSLYLLGLNYFNQLINRSMIQPIYNYSGEAYACRVHDMVLDLICNLSYEAKFVNLLDGTGNSMSSQSNCRRLSLQKRNEDHQVRPFTDIKSMSRVRSITIFPSAIEVMPSLSRFDVLRVLDLSRCNLGENSSLQLNLKDVGHLTHLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNRNIKELPSTVCNFRRLIYLNLVGCQVVPPVGLLQNLTAIEVLRGILVSLNIIAQELGKLKSMRELEIRFNDGSLDLYEGFVKSLCNLHHIESLIIGCNSRETSSFEVMDLLGERWVPPVHLREFESSMPSQLSALRGWIKRDPSHLSNLSDLVLPVKEVQQDDVEIIGGLLALRRLWIKSNHQTQRLLVIPVDGFHCIVDFQLDCGSATQILFEPGALPRAESVVISLGVRVAKEDGNRGFDLGLQGNLLSL

HMMPanther: PTHR23155
4-894 PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

VTGAISNLIPKLGELLTEEFKLHKGVKKNIEDLGKELESMNAALIKIGEVPREQLDSQDKLWADEVRELSYVIEDVVDKFLVQVDGIQSDDNNNKFKGLMKRTTELLKKVKHKHGIAHAIKDIQEQLQKVADRRDRNKVFVPHPTRPIAIDPCLRALYAEATELVGIYGKRDQDLMRLLSMEGDDASNKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKLWEGINFAFSNRNNLGSRLITTTRIVSVSNSCCSSDGDSVYQMEPLSVDDSRMLFSKRIFPDENGCINEFEQVSRDILKKCGGVPLAIITIASALAGDQKMKPKCEWDILLRSLGSGLTEDNSLEEMRRILSFSYSNLPSHLKTCLLYLCVYPEDSMISRDKLIWKWVAEGFVHHENQGNSLYLLGLNYFNQLINRSMIQPIYNYSGEAYACRVHDMVLDLICNLSYEAKFVNLLDGTGNSMSSQSNCRRLSLQKRNEDHQVRPFTDIKSMSRVRSITIFPSAIEVMPSLSRFDVLRVLDLSRCNLGENSSLQLNLKDVGHLTHLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNRNIKELPSTVCNFRRLIYLNLVGCQVVPPVGLLQNLTAIEVLRGILVSLNIIAQELGKLKSMRELEIRFNDGSLDLYEGFVKSLCNLHHIESLIIGCNSRETSSFEVMDLLGERWVPPVHLREFESSMPSQLSALRGWIKRDPSHLSNLSDLVLPVKEVQQDDVEIIGGLLALRRLWIKSNHQTQRLLVIPVDGFHCIVDFQLDCGSATQILFEPGALPRAESVVISLGVRVAKEDGNRGFDLGLQGNLLSL

superfamily: SSF52540
150-407 SSF52540

PIAIDPCLRALYAEATELVGIYGKRDQDLMRLLSMEGDDASNKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKLWEGINFAFSNRNNLGSRLITTTRIVSVSNSCCSSDGDSVYQMEPLSVDDSRMLFSKRIFPDENGCINEFEQVSRDILKKCGGVPLAIITIASALAGDQKMKPKCEWDILLRSLGSGLTED

HMMPfam: PF00931
IPR002182
191-463 NB-ARC,NBS
NB-ARC

NKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKLWEGINFAFSNRNNLGSRLITTTRIVSVSNSCCSSDGDSVYQMEPLSVDDSRMLFSKRIFPDENGCINEFEQVSRDILKKCGGVPLAIITIASALAGDQKMKPKCEWDILLRSLGSGLTEDNSLEEMRRILSFSYSNLPSHLKTCLLYLCVYPEDSMISRDKLIWKWVAEGFVHHEN

Gene3D: G3DSA:3.40.50.300
191-287 G3DSA:3.40.50.300

NKRLKKVSIVGFGGLGKTTLARAVYEKIKGDFDCRAFVPVGQNPDMKKVLRDILIDLGNPHSDLAMLDANQLIKKLHEFLENKRYLVIIDDIWDEKL

FPrintScan: PR00364
IPR000767
196-211 DISEASERSIST
Disease resistance protein

KVSIVGFGGLGKTTLA

FPrintScan: PR00364
IPR000767
269-283 DISEASERSIST
Disease resistance protein

FLENKRYLVIIDDIW

Gene3D: G3DSA:3.80.10.10
288-293 G3DSA:3.80.10.10

WEGINF

FPrintScan: PR00364
IPR000767
367-381 DISEASERSIST
Disease resistance protein

CGGVPLAIITIASAL

superfamily: SSF52058
499-870 SSF52058,LRR

RVHDMVLDLICNLSYEAKFVNLLDGTGNSMSSQSNCRRLSLQKRNEDHQVRPFTDIKSMSRVRSITIFPSAIEVMPSLSRFDVLRVLDLSRCNLGENSSLQLNLKDVGHLTHLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNRNIKELPSTVCNFRRLIYLNLVGCQVVPPVGLLQNLTAIEVLRGILVSLNIIAQELGKLKSMRELEIRFNDGSLDLYEGFVKSLCNLHHIESLIIGCNSRETSSFEVMDLLGERWVPPVHLREFESSMPSQLSALRGWIKRDPSHLSNLSDLVLPVKEVQQDDVEIIGGLLALRRLWIKSNHQTQRLLVIPVDGFHCIVDFQLDCGSATQILFEPGALPRAESVVISL

Gene3D: G3DSA:3.80.10.10
558-750 G3DSA:3.80.10.10

SRVRSITIFPSAIEVMPSLSRFDVLRVLDLSRCNLGENSSLQLNLKDVGHLTHLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNRNIKELPSTVCNFRRLIYLNLVGCQVVPPVGLLQNLTAIEVLRGILVSLNIIAQELGKLKSMRELEIRFNDGSLDLYEGFVKSLCNLHHIESLIIGCNSRETSSFEVM

HMMPfam: PF12799
609-643 LRR_4,Leucine Rich repeats (2 copies)

THLRYLGLEGTNISKLPAEIGKLQFLEVLDLGNNR

FPrintScan: PR00364
IPR000767
629-645 DISEASERSIST
Disease resistance protein

GKLQFLEVLDLGNNRNI

Gene3D: G3DSA:3.80.10.10
809-825 G3DSA:3.80.10.10

IGGLLALRRLWIKSNHQ


Diseases

Disease Pathogen Avirulence gene
Powdery mildew (barley)

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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