PRGDB00061436 (Pi36)
| Pi36 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 114329517 (DQ900896) |
| Gene Class | CNL |
| Domain Type | NBS, LRR, Others |
| Chromosome | 8 |
| Gene Species | Oryza sativa Indica Group |
DNA Sequence
ATGGAGTTCGTCACTGGGGCGATGAGTAGCCTGATCCCCAAGCTGGGCGAGCTGCTGAAGGAGAAGTACAATCTGCAGAAGAACATAAGGGGGAAGATCGAGTCTCTCTCGGCGGAGCTCCGGCGAGCGCAAGCCGTCCTCCGCATGGTCGGCGAGGTGCCACAAGACCAGCAGAACGAGCTGGTGAAGCTCTGGGCGAGCGACCTCAGGGAGGCGTCCTACGACATGGAGGATATCATCGACGCCTTCTTGGTTCATGTCGACGACGATGGCCCCAAGCCAGCCGACCCACATGTGCTCAGGCGCCTCGGCAAGCAGGTGAAGAAACTGTTCAAGAAGACCAAGCATCGCGTCACCATCGCGGACGCAATCCAAGAAATGGAAAAGAAGCTCCTGGAGATTGATGCAAGGCATGGCAGATACCCAGTTGATAACATAGTTATCCCTGCACGTCCGACGCCTATTGATCCTCGCATCCTAAATATTGAGAAAATGGCAAACAATCTTGTTGGCATTGATGAGCCAAGGGATGAGCTTATTAAGATGTTGTCACAACATGAGCGTGACAACAATCTTAATACGTCCAATAGGAAGACAAAGATAGTATACGTCGTTGGAATGGGTGGTCTGGGCAAAACCACCCTTGCCACAGCAGTATATGAGAAGATTAAAGTGGGTTTTCCTTTGAATGCTTTTGTTCCAATCGGTCAAAATCCTAATATGAAGGCAATCTTGTGGAACATTCTTCATCGCCTTGGCTCGGAGAAGTACCTGAATTGTCCAAATATTGAGATGTTGACTGTACAGGAGCTCATCGGTGAACTCAAGCAATTCATCAAGGGAAAGAGGTTTTTTATCGTTATAGATGACATATGGGATAAGCCATCATGGCAAATACTCGAAAGTGGTTTACAAGATAATGATTACGGAAGTAAAATACTTGTAACTACTCGTAAATCTGAGGTTGCAACAATTATCAGCGATGTGTACAATATGAAACCACTTTCTCATGATAACTCTAAAGAATTATTGTATACAAGAACTGGTAGTGAAGGCAAATCTCTTGACAGTTCATCAACTGAGGCATGTGACAAGATTTTGAAGAAATGTGCTGGTGTGCCATTAGCTATCATTACGATAGCTAGCTTGTTGGCTAGTAGATCAGGTCTGGACTGGTCTGAGGTGTACAGAGCTATTGATTTTGGAGAAGAAGACAACTATGAAATGGCAAATACTAAAAGGATATTGTCTTTTAGCTACTACGATCTGCCTTCACATTTAAAGAATTGTTTGCTCTATCTAAGCATGTTTCCAGAAGATTATAAAATTGACAAAAATCATTTGATATGGATGTGGATAGCTGAAGGTTTTGTCCCTGAGAAACAAAACACAAATTTAGGATTATATGAGCTTGGGGAGAGTTACTTCAATGAGCTGATAAATAGAAGCATGATCCAGCCAATTGAGAATGAATTTTTTGGGTGTATAGAAGGTTGTCGTGTTCATGATATGGTGCTCGATCTAGCTCGTTCATTGACAAGTGAACAAAACTTTGTCACCGTATTGGATAACGATGAGCAACGGAAACCTGAAAGCACCAATGCTCGTAGGTTGGCCCTGCACCGTACGAGTATCACGAGCTATCGATTTGTTAATATGGATATGAAGAAAGTGAGGTCATTTGTTGCCACTGAGTGCAATAATGGCAATAATAGTGTGGCACCACCAAGGTTCCAAGTTTTACGTGTGTTGTCCTTGGACAAATGTAGTGGTATGGAGGATTATTACATAGAAAGTATCTTGCAGTATGCTGGAAGGCTGGGTCACCTGAGGTGCCTCCAGCTTTCCTCACACACAGAGTTTCATAGGCTCCCTAAAGAATTAGGAGATCTCAAGTTTCTAAAAATACTGGACTTGGGTGATTGTGGCGGTACAATAGAAGAGCTGCCGGAGGAGTTGGGTCTCCTGACACATTTGTTGTGTCTACGTATTCCTCGCAGATTGGAGATGTTGCCAGCTGGTTTGATCGGAAAACTGACATCGCTGCAAGAGCTATGCATAAGTCTTATCGAAGAGGTCGCTGTAAGGCACTTTGTGCAGGAGTTGGGCAACCTCAGAGAACTGAGGGTGCTCTATGCCAAAATTTATATAGGGCTGAAAGATGAGAGCATGCAGAGAGATTTTCTACAGTCCTTAGGCTGTCTACATAAGGTCCACACTATGAATATATATAGCATTGAAGTAAGGGAATGCACCAGACCAGATGCAGCAGGTTCTGTGTCCTGTCCTCGGCTCTGGCAGCTGTCATTGCCATGCATCAAGTTTTTTAGCCTACCTGTGTGGATTAACTCATCAACTCTTGGTTGCCTCTCGCATCTAGACGTGAAAGTACAGGTTGTGAGAGAGCAGGACATGGAAACCCTTGGAAGGCTCCCAATGCTCTGTTACCTCAAATTGGATTCCCAATATACCAGGCTAATAAGCATTAAGAAGCCTGCTGATGATGGCTACTTCCGAAAATTGAGATTCTTTAAAACTCCTCATTCATTTGTCCGGTTTGATCTTCATGGTTGCGAGTCCAGCAGTGGAGCATCTAGCTTCATGCCAAGACTTGAACACATTGAATTCAGTGTCGATGTTCGGTTCCTAAAAGATGCAGCAGACCTGCATGCTGGTCTTAACAACCTGCTTGCAGGCTTCAATGACTTTGGAAGAACTTCGCTCAAGAGTGTCGACGCTAGGATCCACTGCAAGGATGCCCTTGCTGCGGAGGTGCAGGAAGCCGAGGTGGCATTGGCAAATGCAGCACACGGCCATCCCAACCGTCCAGTCCTTCGAACTGATATGGCATATGAGAGGATGATGCGCTCACCTGATGACGATAAGCCAACAAGCTGGTCCGATCAAAAATTTTTTGAGACACATGTCTATCCGTCGTCGAATGACCATCATCGTTACCTTAGCTACCTCCGGTTGTTGAAGAAGCCACGCCTGGAGAAGCTTATAGTCAACATATATGTGTCCAAGGATGGTATGGTTGGGGATGTGGATGAAGCTGTGGCAGCTGCGAGGAACGTAGTCGACCATCATATCAACCATCCAACACTTGAGATAAATAGAATGGAAGAAAGTATTTCTGACCAACATCAACAGGTCCCTGAAAATAATTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| CC-NBS-LRR Pi36 | CC-NBS-LRR Pi36 [Oryza sativa Indica Group]. | MEFVTGAMSSLIPKLGELLKEKYNLQKNIRGKIESLSAELRRAQAVLRMVGEVPQDQQNELVKLWASDLREASYDMEDIIDAFLVHVDDDGPKPADPHVLRRLGKQVKKLFKKTKHRVTIADAIQEMEKKLLEIDARHGRYPVDNIVIPARPTPIDPRILNIEKMANNLVGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDVYNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAIDFGEEDNYEMANTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLIWMWIAEGFVPEKQNTNLGLYELGESYFNELINRSMIQPIENEFFGCIEGCRVHDMVLDLARSLTSEQNFVTVLDNDEQRKPESTNARRLALHRTSITSYRFVNMDMKKVRSFVATECNNGNNSVAPPRFQVLRVLSLDKCSGMEDYYIESILQYAGRLGHLRCLQLSSHTEFHRLPKELGDLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGNLRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLPVWINSSTLGCLSHLDVKVQVVREQDMETLGRLPMLCYLKLDSQYTRLISIKKPADDGYFRKLRFFKTPHSFVRFDLHGCESSSGASSFMPRLEHIEFSVDVRFLKDAADLHAGLNNLLAGFNDFGRTSLKSVDARIHCKDALAAEVQEAEVALANAAHGHPNRPVLRTDMAYERMMRSPDDDKPTSWSDQKFFETHVYPSSNDHHRYLSYLRLLKKPRLEKLIVNIYVSKDGMVGDVDEAVAAARNVVDHHINHPTLEINRMEESISDQHQQVPENN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF194 | 1-819 | PTHR23155:SF194,OS11G0130900 PROTEIN | MEFVTGAMSSLIPKLGELLKEKYNLQKNIRGKIESLSAELRRAQAVLRMVGEVPQDQQNELVKLWASDLREASYDMEDIIDAFLVHVDDDGPKPADPHVLRRLGKQVKKLFKKTKHRVTIADAIQEMEKKLLEIDARHGRYPVDNIVIPARPTPIDPRILNIEKMANNLVGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDVYNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAIDFGEEDNYEMANTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLIWMWIAEGFVPEKQNTNLGLYELGESYFNELINRSMIQPIENEFFGCIEGCRVHDMVLDLARSLTSEQNFVTVLDNDEQRKPESTNARRLALHRTSITSYRFVNMDMKKVRSFVATECNNGNNSVAPPRFQVLRVLSLDKCSGMEDYYIESILQYAGRLGHLRCLQLSSHTEFHRLPKELGDLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGNLRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLPVWINSSTLGCLSHLDVKVQVVREQDMETLGRLPMLCYLKL |
| HMMPanther: PTHR23155 | 1-819 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MEFVTGAMSSLIPKLGELLKEKYNLQKNIRGKIESLSAELRRAQAVLRMVGEVPQDQQNELVKLWASDLREASYDMEDIIDAFLVHVDDDGPKPADPHVLRRLGKQVKKLFKKTKHRVTIADAIQEMEKKLLEIDARHGRYPVDNIVIPARPTPIDPRILNIEKMANNLVGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDVYNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAIDFGEEDNYEMANTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLIWMWIAEGFVPEKQNTNLGLYELGESYFNELINRSMIQPIENEFFGCIEGCRVHDMVLDLARSLTSEQNFVTVLDNDEQRKPESTNARRLALHRTSITSYRFVNMDMKKVRSFVATECNNGNNSVAPPRFQVLRVLSLDKCSGMEDYYIESILQYAGRLGHLRCLQLSSHTEFHRLPKELGDLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGNLRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLPVWINSSTLGCLSHLDVKVQVVREQDMETLGRLPMLCYLKL |
| superfamily: SSF52540 | 152-399 | SSF52540 | PTPIDPRILNIEKMANNLVGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDVYNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAI |
| Gene3D: G3DSA:3.40.50.300 | 170-324 | G3DSA:3.40.50.300 | VGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVAT |
| HMMPfam: PF00931 IPR002182
|
191-462 | NB-ARC,NBS NB-ARC
|
NLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKVGFPLNAFVPIGQNPNMKAILWNILHRLGSEKYLNCPNIEMLTVQELIGELKQFIKGKRFFIVIDDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDVYNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAIDFGEEDNYEMANTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLIWMWIAEGFVPEKQ |
| FPrintScan: PR00364 IPR000767
|
201-216 | DISEASERSIST Disease resistance protein
|
IVYVVGMGGLGKTTLA |
| FPrintScan: PR00364 IPR000767
|
278-292 | DISEASERSIST Disease resistance protein
|
FIKGKRFFIVIDDIW |
| FPrintScan: PR00364 IPR000767
|
370-384 | DISEASERSIST Disease resistance protein
|
CAGVPLAIITIASLL |
| superfamily: SSF52047 | 533-825 | SSF52047,LRR | TNARRLALHRTSITSYRFVNMDMKKVRSFVATECNNGNNSVAPPRFQVLRVLSLDKCSGMEDYYIESILQYAGRLGHLRCLQLSSHTEFHRLPKELGDLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGNLRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLPVWINSSTLGCLSHLDVKVQVVREQDMETLGRLPMLCYLKLDSQYTR |
| Gene3D: G3DSA:3.80.10.10 | 597-814 | G3DSA:3.80.10.10 | IESILQYAGRLGHLRCLQLSSHTEFHRLPKELGDLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGNLRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLPVWINSSTLGCLSHLDVKVQVVREQDMETLGRLPML |
| FPrintScan: PR00364 IPR000767
|
629-645 | DISEASERSIST Disease resistance protein
|
GDLKFLKILDLGDCGGT |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Rice blast disease |
List of References
Xinqiong Liu, Fei Lin, Ling Wang, Qinghua Pan
The in silico map-based cloning of Pi36, a rice coiled-coil nucleotide-binding site leucine-rich repeat gene that confers race-specific resistance to the blast fungus.
Genetics: 2007, 176(4);2541-9
PubMed:17507669
WorldCat.org
DOI
(P p)
List of Contributions
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