PRGDB00061439 (Lr10)
Lr10 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 33302326 (AY270157) |
Gene Class | CNL |
Domain Type | NBS, LRR, Others |
Gene Species | Triticum aestivum |
DNA Sequence
ATGGCACCATGTCTGGTGAGCGCATCTACGGGAGCAATGGGTTCCCTCCTGACAAAGTTGGAAACCATGCTAGATGACGAATACATCCTGCTCAATGTTCGCCGCGACATCAAGTTCGTCATACATGAGCTTGCTATGTGGCAATCATTTCTCCTCGATGTGGCGGACACGGAGGAACCTGGACAGCATGACAAGAGTTGTGCTGACTTAGTGCGGGAGCTCTCATATGATATTGAGGACAAGATTGACAACTCCATGTCACTTATGCTCCATCACGCCTGTCCCAAGAGTGGCATCAAGAAGCACATGAGCAAATTCAAGAACTTGTTACCTGTCAAGATCCCGTATCAGATAGCCAAAGATATAAAAGACATCAAGAGCCAAATCTTGGAGGTCAGTAATAGATGTGAAAGATACAGGTTTGAGGATGTCTGCCTCGCAAGAACAGAATTCGTTGACCCTAGATTGTGCACTGTCGATACATGTGCAGCCGACCTTGTAGGCATTGATGGTCCGAAACATGAGCTTGTTAAGTGGCTAAGAAACGGGGAGGATGAATCGGTGCATCAACAGAAGGTTGTCTCTATTGTTGGTTGTGCGGGATTAGGGAAGACGACTCTTGCCAAACAGGTCTACGACGAGCTTAGAATAAACTTTGAATATCGGGCTTTTGTATCAATTTCACGAAGCCCTAATATGGCAACCATTTTAAAATGTGTACTGTCTCAATTCCACGCTCAAGATTATTCTTCCGATGAAAGCGAGATTCCAAAACTCGTCGATCAAATCAGAGATCTCCTACAAGATAAAAGGTACTTTGTGATAATCGATGATATATGGGATATGAAGACATGGGATGTTTTGAAATGTGCGTTATGCAAGAATAGTTGTGGCAGTGTAATAATGACCACAACACGTATTTATGATGTAGCTAAATCATGTTGCTCTTCTAACGGGGATCTTGTCTACAATATCCAACCACTTAGTGTTGCTGACTCGGAGGAGCTATTTTTGAACCGAGTATTTGGTCACGAAAAGGGATTTCCCCCTGAATTGAAAGAAGTCTCGAAGGATGTCTTAAGAAAATGTGGTGGTTTACCACTGGCCATCAATGCCATATCTAGCTTGCTGGCTGCTGAGAAAATCGAAGAGTGGGATCGCGTGGGACTCTCTAATGTCTTTGCACAAGGAGAAAAATCTGACATTGATGCTATGAAATACAAATTATCTCTGTGTTATTTTGACCTTCCCCTCCATCTAAGAAGTTGTTTATTGTATTTGATTATGTTTCCTGAAGATTGTTTGATTGAAAAGGAGCGGTTAGTACACAGATGGATTTCAGAGGGCTTCATTCGCAATGAAGATGGGGAAGATCTTGTTGAAGTAGGAGAGAGATATTTATATGAGCTTGTTAACAGAAGTTTAATAGAATCAGTGGGCGTGCCATATGATGGTAAGGCACGGTTCTACAGAGTCCACAATGTTATCCTTGATTTCCTCATGATAAAGTCCATGGAAGAGAATTTTTGTACTTTGACAAGTAATCAATCAAGGCTAGATTACAAAGTACGTCGTCTCTCTCTGTTTGCAAATAAAGATCCATCATGTATCGCACAACTGGATTTATCGCATGCTCGATCTCTCGGTGCTTCTGGGCATCTTGGGCAATTAATTTCCTCTGTGAAGTCAAATGCTCTGCGTGTGCTCGACGTACAAGATTGCTCGGAGTTGGGGAATCATCATGTCAAAGATATTGGAAGAAATCCTCTATTAAGGTACTTGAACATCTCTGGAACAGATGTAACTGAGCTTCCCATACAGATTGGAGATATGGGGTTCCTAGAAACACTTGATGCATCATTTACGGAATTAGTTGAGATGCCTGGATCCATTACTCGTCTAAGACAACTGCAGCGTCTGTTTGTTTCAGATGAAACTAAATTGCCTGATGAGATTGGAAATATGAAGAGGTTGCAAGAGCTTGGTGATATAAATGCCTTCAAGCAATCCGTTAACTTTCTGAATGAGCTGGGCAAATTAACGGGTTTGCGTAAGCTGGGAATTATTTGGGACACCAATGATATTCTTAAATCTGGCAAGGGAAGTTCCAAGGAAAAAAGGTTGGTGTCCTCCCTCTCTAAATTGGATGCAGGCAGACTTAGCAACCTCTATGTTACATTTTATTTGAGAGAAAAGGATGGCTTCATAGGACATCCGTTCTTGCCTGCTCTCAATAGCATCCGAGAGGTCTATCTCCGCCGTGGACGCATGTGTTGGATGAACAAATGGCTGCTTTCACTTGCCAACCTAGAAAAATTATATATCAGTGGTGGGGATGAGATAGAGCAAGATGATCTGCGTACAGTTGGAAGCATACCAACTCTGGTTGAATTCAAGCTTTACTCTGGCTGCTTAGGGCCTATCATCATAAGTTCAGGATTTGAACAGTTAGAAAGGCTCGAGTTGAAGTTCAGTTTTTCGCAGCTGACGTTTGAAGTGGGCGCTATGCCTAACCTGAAGAAACTTGATCTCCATGTTTATTTATCAAAGTTCAAATCTGCTGGTGCTGGTTTTGATTTTGGCATCCAGCATCTCTCCAGCCTTGCTTGCGTTTCTATTGTCATATTTTGCGAGGGCGTCAGTGCTGCCTATGTGGAGGCAGCGGAGGGAGCTTTCAAGAGCATGGTCAATGCACACCCCAACCCCAACCGGCCCATGCTGGAAATGACTAGAGAATCTGCGGACTTCATGTCACAGGATGAGTGA
Protein sequences
Name | Description | Sequence |
---|---|---|
resistance protein LR10 | resistance protein LR10 [Triticum aestivum]. | MAPCLVSASTGAMGSLLTKLETMLDDEYILLNVRRDIKFVIHELAMWQSFLLDVADTEEPGQHDKSCADLVRELSYDIEDKIDNSMSLMLHHACPKSGIKKHMSKFKNLLPVKIPYQIAKDIKDIKSQILEVSNRCERYRFEDVCLARTEFVDPRLCTVDTCAADLVGIDGPKHELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMKTWDVLKCALCKNSCGSVIMTTTRIYDVAKSCCSSNGDLVYNIQPLSVADSEELFLNRVFGHEKGFPPELKEVSKDVLRKCGGLPLAINAISSLLAAEKIEEWDRVGLSNVFAQGEKSDIDAMKYKLSLCYFDLPLHLRSCLLYLIMFPEDCLIEKERLVHRWISEGFIRNEDGEDLVEVGERYLYELVNRSLIESVGVPYDGKARFYRVHNVILDFLMIKSMEENFCTLTSNQSRLDYKVRRLSLFANKDPSCIAQLDLSHARSLGASGHLGQLISSVKSNALRVLDVQDCSELGNHHVKDIGRNPLLRYLNISGTDVTELPIQIGDMGFLETLDASFTELVEMPGSITRLRQLQRLFVSDETKLPDEIGNMKRLQELGDINAFKQSVNFLNELGKLTGLRKLGIIWDTNDILKSGKGSSKEKRLVSSLSKLDAGRLSNLYVTFYLREKDGFIGHPFLPALNSIREVYLRRGRMCWMNKWLLSLANLEKLYISGGDEIEQDDLRTVGSIPTLVEFKLYSGCLGPIIISSGFEQLERLELKFSFSQLTFEVGAMPNLKKLDLHVYLSKFKSAGAGFDFGIQHLSSLACVSIVIFCEGVSAAYVEAAEGAFKSMVNAHPNPNRPMLEMTRESADFMSQDE |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR11017 | 19-688 | FAMILY NOT NAMED,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | KLETMLDDEYILLNVRRDIKFVIHELAMWQSFLLDVADTEEPGQHDKSCADLVRELSYDIEDKIDNSMSLMLHHACPKSGIKKHMSKFKNLLPVKIPYQIAKDIKDIKSQILEVSNRCERYRFEDVCLARTEFVDPRLCTVDTCAADLVGIDGPKHELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMKTWDVLKCALCKNSCGSVIMTTTRIYDVAKSCCSSNGDLVYNIQPLSVADSEELFLNRVFGHEKGFPPELKEVSKDVLRKCGGLPLAINAISSLLAAEKIEEWDRVGLSNVFAQGEKSDIDAMKYKLSLCYFDLPLHLRSCLLYLIMFPEDCLIEKERLVHRWISEGFIRNEDGEDLVEVGERYLYELVNRSLIESVGVPYDGKARFYRVHNVILDFLMIKSMEENFCTLTSNQSRLDYKVRRLSLFANKDPSCIAQLDLSHARSLGASGHLGQLISSVKSNALRVLDVQDCSELGNHHVKDIGRNPLLRYLNISGTDVTELPIQIGDMGFLETLDASFTELVEMPGSITRLRQLQRLFVSDETKLPDEIGNMKRLQELGDINAFKQSVNFLNELGKLTGLRKLGI |
HMMPanther: PTHR11017:SF126 | 19-688 | OS11G0237600 PROTEIN,OS11G0237600 PROTEIN | KLETMLDDEYILLNVRRDIKFVIHELAMWQSFLLDVADTEEPGQHDKSCADLVRELSYDIEDKIDNSMSLMLHHACPKSGIKKHMSKFKNLLPVKIPYQIAKDIKDIKSQILEVSNRCERYRFEDVCLARTEFVDPRLCTVDTCAADLVGIDGPKHELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMKTWDVLKCALCKNSCGSVIMTTTRIYDVAKSCCSSNGDLVYNIQPLSVADSEELFLNRVFGHEKGFPPELKEVSKDVLRKCGGLPLAINAISSLLAAEKIEEWDRVGLSNVFAQGEKSDIDAMKYKLSLCYFDLPLHLRSCLLYLIMFPEDCLIEKERLVHRWISEGFIRNEDGEDLVEVGERYLYELVNRSLIESVGVPYDGKARFYRVHNVILDFLMIKSMEENFCTLTSNQSRLDYKVRRLSLFANKDPSCIAQLDLSHARSLGASGHLGQLISSVKSNALRVLDVQDCSELGNHHVKDIGRNPLLRYLNISGTDVTELPIQIGDMGFLETLDASFTELVEMPGSITRLRQLQRLFVSDETKLPDEIGNMKRLQELGDINAFKQSVNFLNELGKLTGLRKLGI |
superfamily: SSF52540 | 149-393 | P-loop containing nucleoside triphosphate hydrolases | TEFVDPRLCTVDTCAADLVGIDGPKHELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMKTWDVLKCALCKNSCGSVIMTTTRIYDVAKSCCSSNGDLVYNIQPLSVADSEELFLNRVFGHEKGFPPELKEVSKDVLRKCGGLPLAINAISSLLAAEKIEEWDRVGLSNV |
Gene3D: G3DSA:3.40.50.300 | 164-283 | no description | ADLVGIDGPKHELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMK |
HMMPfam: PF00931 IPR002182
|
174-455 | NB-ARC,NBS NB-ARC
|
HELVKWLRNGEDESVHQQKVVSIVGCAGLGKTTLAKQVYDELRINFEYRAFVSISRSPNMATILKCVLSQFHAQDYSSDESEIPKLVDQIRDLLQDKRYFVIIDDIWDMKTWDVLKCALCKNSCGSVIMTTTRIYDVAKSCCSSNGDLVYNIQPLSVADSEELFLNRVFGHEKGFPPELKEVSKDVLRKCGGLPLAINAISSLLAAEKIEEWDRVGLSNVFAQGEKSDIDAMKYKLSLCYFDLPLHLRSCLLYLIMFPEDCLIEKERLVHRWISEGFIRNED |
FPrintScan: PR00364 IPR000767
|
193-208 | DISEASERSIST Disease resistance protein
|
VVSIVGCAGLGKTTLA |
FPrintScan: PR00364 IPR000767
|
266-280 | DISEASERSIST Disease resistance protein
|
LLQDKRYFVIIDDIW |
FPrintScan: PR00364 IPR000767
|
363-377 | DISEASERSIST Disease resistance protein
|
CGGLPLAINAISSLL |
Seg: seg | 366-379 | seg | LPLAINAISSLLAA |
superfamily: SSF52047 | 521-845 | RNI-like,LRR | YKVRRLSLFANKDPSCIAQLDLSHARSLGASGHLGQLISSVKSNALRVLDVQDCSELGNHHVKDIGRNPLLRYLNISGTDVTELPIQIGDMGFLETLDASFTELVEMPGSITRLRQLQRLFVSDETKLPDEIGNMKRLQELGDINAFKQSVNFLNELGKLTGLRKLGIIWDTNDILKSGKGSSKEKRLVSSLSKLDAGRLSNLYVTFYLREKDGFIGHPFLPALNSIREVYLRRGRMCWMNKWLLSLANLEKLYISGGDEIEQDDLRTVGSIPTLVEFKLYSGCLGPIIISSGFEQLERLELKFSFSQLTFEVGAMPNLKKLDLH |
FPrintScan: PR00364 IPR000767
|
561-577 | DISEASERSIST Disease resistance protein
|
VKSNALRVLDVQDCSEL |
Gene3D: G3DSA:3.80.10.10 | 746-845 | no description | SIREVYLRRGRMCWMNKWLLSLANLEKLYISGGDEIEQDDLRTVGSIPTLVEFKLYSGCLGPIIISSGFEQLERLELKFSFSQLTFEVGAMPNLKKLDLH |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Wheat leaf rust | Puccinia triticina |
List of References
Catherine Feuillet, Silvia Travella, Nils Stein, Laurence Albar, Aurélie Nublat, Beat Keller
Map-based isolation of the leaf rust disease resistance gene Lr10 from the hexaploid wheat (Triticum aestivum L.) genome.
Proc. Natl. Acad. Sci. U.S.A.: 2003, 100(25);15253-8
PubMed:14645721
WorldCat.org
DOI
(P p)
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