PRGDB00061452 (IVR)
IVR | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 3355639 (AJ009684) |
Gene Class | Other |
Domain Type | |
Gene Species | Nicotiana tabacum |
DNA Sequence
ATGAATCGACCTGAAGCTGCTGTGGTTGCCTTTAGAGGAGCTCAAGAGTTGAGACCTGATCTTCGTTCTTATCAAGGTTTAGTACGCTCTTATTTAGCAATTTCAAAGATCAAGGAGGCACTGCATGCTGCAAGGGAGGCAATGAAGGCCATGCCACAGTCAGCAAAAGCTCTAAAATTGGTGGGTGATGTACATGCTAGTAATACTAGTGGGAGGGAAAAGGCAAAGAAGTTCTATGAATCTTCACTAAGGCTGGAACCTGGTTATCTTGGAGCAGCGCTAGCCTTGGCAGAACTGCATGTCATTGAAGGTCGAACTGTAGATGCTGTTACTCTCCTTGAGCGGTATCTCAAGGATTGGGCTGATGACTCGTTGCATGTTAAGCTTGCCCAAGTATTTGCTGCAACAAATATGCCACAAGATGCCTTGTCACACTACCAGGCAGCACTGAGGATAAATCCCCAAAATGAAGCTGCAAAGAAAGGGTTGGGAGCGCCTGGAGAAGCAGCTCAAGGGAGTAGATCTGATGCTCCTGAAGAAGATGAAGAGAATGATGCTGAGGATGCTGATGCAGACCAGGAAGAGGCTGAGCTTTTATGA
Protein sequences
Name | Description | Sequence |
---|---|---|
IVR-like protein | IVR-like protein [Nicotiana tabacum]. | MNRPEAAVVAFRGAQELRPDLRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQNEAAKKGLGAPGEAAQGSRSDAPEEDEENDAEDADADQEEAELL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR12558:SF8 | 1-197 | PTHR12558:SF8,ANAPHASE PROMOTING COMPLEX SUBUNIT 7 | MNRPEAAVVAFRGAQELRPDLRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQNEAAKKGLGAPGEAAQGSRSDAPEEDEENDAEDADADQEEAE |
HMMPanther: PTHR12558 | 1-197 | PTHR12558,CELL DIVISION CYCLE 16 | MNRPEAAVVAFRGAQELRPDLRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQNEAAKKGLGAPGEAAQGSRSDAPEEDEENDAEDADADQEEAE |
ProfileScan: PS50293 IPR013026
|
1-21 | TPR_REGION Tetratricopeptide repeat-containing domain
|
MNRPEAAVVAFRGAQELRPDL |
superfamily: SSF48452 | 1-162 | SSF48452 | MNRPEAAVVAFRGAQELRPDLRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQNEAAKKG |
Gene3D: G3DSA:1.25.40.10 IPR011990
|
2-164 | TPR-like_helical Tetratricopeptide-like helical
|
NRPEAAVVAFRGAQELRPDLRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQNEAAKKGLG |
ProfileScan: PS50005 IPR019734
|
21-54 | TPR Tetratricopeptide repeat
|
LRSYQGLVRSYLAISKIKEALHAAREAMKAMPQS |
ProfileScan: PS50293 IPR013026
|
21-156 | TPR_REGION Tetratricopeptide repeat-containing domain
|
LRSYQGLVRSYLAISKIKEALHAAREAMKAMPQSAKALKLVGDVHASNTSGREKAKKFYESSLRLEPGYLGAALALAELHVIEGRTVDAVTLLERYLKDWADDSLHVKLAQVFAATNMPQDALSHYQAALRINPQN |
ProfileScan: PS50005 IPR019734
|
123-156 | TPR Tetratricopeptide repeat
|
DSLHVKLAQVFAATNMPQDALSHYQAALRINPQN |
HMMPfam: PF07719 IPR013105
|
126-156 | TPR_2 Tetratricopeptide TPR2
|
HVKLAQVFAATNMPQDALSHYQAALRINPQN |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Tobacco Mosaic Virus | Tobacco mosaic virus |
List of Contributions
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