PRGDB00061458 (Pi5-1)
| Pi5-1 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 213958600 (EU869185) |
| Gene Class | CNL |
| Domain Type | NBS, LRR, Others |
| Chromosome | 9 |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGTTGGCGCCGAGATGCTTGTGGCCGCGGCGGTGAGCCAGGTCGCCCGGAAGATCAACGACATCGTGGGGGTCGCGCAGGGCGAGGTGAAGCTGTGCTGCAATTTCAGCGACGATTTGGAGGGCATCAAGGATACCCTTGTGTACCTGGAAACCTTGCTGAAAAATGCGGAGAATAACTCCTTCGGAAGCGACAGGGCCAACCTGCGCCACTGGCTTGGCCAGATCAAGTCCCTGGCTTACGATATCGAAGATATCGTTGATGGGTACTACTCTTCCAAGGAGCAGTTCGATGGGGGCAGCTATGCACAGAAGGGGTCATTATTCTGCTCGCTATCCAATCCAATGCTTCTGAAAGGTAGCATGGTTTATAAGATGAAATCCAAGAGAGAGATGCTACAGCAAAGCCAACAGTTGCCCAATCAGTATCATTTCCTTTCATATATCAATTCAGCTGTGCATTATTTTGAGGAGAAGCAAACAACATCATACAGAAATACTGACATTGCAATTGTCGGGAGGGATGCTGATTTGGATCATCTCATGGATCTTTTAATGCAAAACAGCGCTGAAGAGCTTTGTATTATACCCATAGTTGGGCCTGTAGGTTTTGGAAAGACAAGCCTTGCACAGTTAGTTTTCAATGATACAAGAACAGAGGTATTCAGCTTTAGGATATGGGTTCATGTTTCCATGGGTAATATCAACCTTGAAAAAATTGGGAGAGATATAGTTTCACAAACTACAGAAAAAATTGAGGGAAATATGCAGCTGCAGTCAATCAAGAATGCTGTTCAGCGTGTGCTAAATAAATATAGTTGCTTGATCATAATAGACAGCCTTTGGGGAAAGGATGAAGAAGTGAATGAATTGAAGCAGATGTTGCTTACAGGTAGACACACAGAAAGCAAGATCATAGTGACCACTCATAGCAATAAAGTAGCTAAGCTGATTTCCACCGTTCCACTGTACAAGTTGGCAGCTTTATCTGAGGATGATTGTTTAAAAATATTCTCTCAAAGGGCAATGACAGGTCCGGGTGACCCGTTGTTCAGGGAATATGGAGAAGAAATCGTTAGAAGGTGTGAAGGCACACCCTTGGTAGCCAATTTTCTCGGTTCTGTGGTGAATGCTCAACGACAAAGGCGTGAGATTTGGCAAGCTGCAAAGGATGAAGAAATGTGGAAGATAGAGGAAGATTATCCCCAAGACAAAATTTCACCACTATTTCCATCATTCAAGATAATATATTATAATATGCCCCATGAGCTAAGATTATGCTTTGTATATTGTTCAATCTTCCCTAAAGGAACTGTTATAGAAAAGAAGAAACTTATTCAGCAATGGATTGCACTTGACATGATTGAGTCCAAACATGGAACCTTGCCACTTGATGTAACTGCGGAGAAATATATTGATGAACTTAAAGCAATCTATTTCCTTCAAGTTTTAGAGCGGTCTCAGAATGATGCAGAAAGATCCAGTGCTTCTGAGGAAATGCTTCGCATGCATAACTTGGCTCATGATCTTGCTAGATCGGTTGCTGGTGAAGATATCCTTGTTATTTTAGATGCCGAGAATGAGCGCAATGCCAGATATTGCAATTACCGTTATGCACAGGTGTCTGCTTCTAGTTTAGAGTCAATCGATCGCAAGGCATGGCCTTCCAAGGCAAGGTCACTAATTTTCAAGAATAGTGGTGTGGACTTTGAGCATGTCAGTGAAGTTCTTTCAGTGAACAAATACCTGCGTGTTTTGGATCTCAGTGGATGTTGTGTTCAAGATATTCCATCTCCTATCTTTCAGCTGAAACAATTGAGATACCTCGACGTTTCATCTTTATCTATTACAGCACTCCCTCTGCAAATTAGTAGCTTTCATAAGTTACAAATGTTGGATCTTTCAGAAACTGAACTAACAGAGTTGCCACCCTTTATAAGCAACTTAAAAGGACTGAATTATTTGAATCTCCAAGGTTGCCAGAAACTTCAACGATTGAATAGCCTTCATTTGTTGCATGATCTACATTACCTAAACTTGTCATGCTGCCCTGAAGTTACTAGTTTTCCTGAATCTATTGAAAATCTGACCAAACTCCGTTTCTTGAATCTTTCTGGATGCTCTAAGCTTTCAACATTACCTATCAGATTTTTGGAATCATTTGCTAGCCTCTGTTCTTTGGTAGATCTTAACTTAAGTGGCTTTGAATTCCAAATGTTGCCCGACTTTTTTGGCAACATATATTCACTTCAGTATTTAAATCTGTCAAAATGTTTGAAACTTGAGGTATTACCACAATCTTTTGGCCAACTTGCATATCTGAAAAGCCTAAATCTTTCATATTGTTCTGATCTTAAACTGCTGGAATCCTTTGAATGCCTTACCTCTCTTCGGTTTTTGAATCTCTCGAACTGCTCTAGGCTTGAATATTTGCCATCATGCTTTGACAAGCTTAATAATTTAGAGTCTCTGAATTTATCACAATGTCTTGGACTTAAAGCACTACCTGAATCACTTCAAAACCTTAAAAATCTTCAGCTTGATGTTTCTGGGTGTCAGGATTGTATAGTACAATCCTTTTCTCTAAGTACCAGAAGTTCCCAGTCCTGCCAACGGTCGGAGAAAGCTGAGCAGGTCAGATCAAGAAACAGTGAAATTTCAGAGATCACTTATGAGGAACCTGCTGAGATTGAACTTTTAAAGAATAATCCAAGTAAAGATTTGGCCTCCATCTCACACCTAAATGAGGATAGAATTGAGGAGCCTGAAGTTGTCACTGAGCCAAGTGCAACTAGAGGTATGGTACAACAGATTCCAGGAAACCAGCTCTCATCGCCTTCATCTCATCTTTCTTCCTTTGCATCAAGCTCAGCGCCATTTGCATCCTCCTCTTCGGACACCTCAACAAGTGAGCATCCAGTGCCTAATGAAGAGGCGGCAGCTTTGACAGTTCCTCGGTCCAAAGAGAAATGCGACAACACTCCCATGCCGGTAAAAGATGGCCTGATATCTGAAGATGATGCACCGGTACATCTGCATCAGAAGCCCCTGCAGGCGACAGCCATGGCAGCCATATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Pi5-1 | Pi5-1 [Oryza sativa Japonica Group]. | MVGAEMLVAAAVSQVARKINDIVGVAQGEVKLCCNFSDDLEGIKDTLVYLETLLKNAENNSFGSDRANLRHWLGQIKSLAYDIEDIVDGYYSSKEQFDGGSYAQKGSLFCSLSNPMLLKGSMVYKMKSKREMLQQSQQLPNQYHFLSYINSAVHYFEEKQTTSYRNTDIAIVGRDADLDHLMDLLMQNSAEELCIIPIVGPVGFGKTSLAQLVFNDTRTEVFSFRIWVHVSMGNINLEKIGRDIVSQTTEKIEGNMQLQSIKNAVQRVLNKYSCLIIIDSLWGKDEEVNELKQMLLTGRHTESKIIVTTHSNKVAKLISTVPLYKLAALSEDDCLKIFSQRAMTGPGDPLFREYGEEIVRRCEGTPLVANFLGSVVNAQRQRREIWQAAKDEEMWKIEEDYPQDKISPLFPSFKIIYYNMPHELRLCFVYCSIFPKGTVIEKKKLIQQWIALDMIESKHGTLPLDVTAEKYIDELKAIYFLQVLERSQNDAERSSASEEMLRMHNLAHDLARSVAGEDILVILDAENERNARYCNYRYAQVSASSLESIDRKAWPSKARSLIFKNSGVDFEHVSEVLSVNKYLRVLDLSGCCVQDIPSPIFQLKQLRYLDVSSLSITALPLQISSFHKLQMLDLSETELTELPPFISNLKGLNYLNLQGCQKLQRLNSLHLLHDLHYLNLSCCPEVTSFPESIENLTKLRFLNLSGCSKLSTLPIRFLESFASLCSLVDLNLSGFEFQMLPDFFGNIYSLQYLNLSKCLKLEVLPQSFGQLAYLKSLNLSYCSDLKLLESFECLTSLRFLNLSNCSRLEYLPSCFDKLNNLESLNLSQCLGLKALPESLQNLKNLQLDVSGCQDCIVQSFSLSTRSSQSCQRSEKAEQVRSRNSEISEITYEEPAEIELLKNNPSKDLASISHLNEDRIEEPEVVTEPSATRGMVQQIPGNQLSSPSSHLSSFASSSAPFASSSSDTSTSEHPVPNEEAAALTVPRSKEKCDNTPMPVKDGLISEDDAPVHLHQKPLQATAMAAI |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 69-997 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LRHWLGQIKSLAYDIEDIVDGYYSSKEQFDGGSYAQKGSLFCSLSNPMLLKGSMVYKMKSKREMLQQSQQLPNQYHFLSYINSAVHYFEEKQTTSYRNTDIAIVGRDADLDHLMDLLMQNSAEELCIIPIVGPVGFGKTSLAQLVFNDTRTEVFSFRIWVHVSMGNINLEKIGRDIVSQTTEKIEGNMQLQSIKNAVQRVLNKYSCLIIIDSLWGKDEEVNELKQMLLTGRHTESKIIVTTHSNKVAKLISTVPLYKLAALSEDDCLKIFSQRAMTGPGDPLFREYGEEIVRRCEGTPLVANFLGSVVNAQRQRREIWQAAKDEEMWKIEEDYPQDKISPLFPSFKIIYYNMPHELRLCFVYCSIFPKGTVIEKKKLIQQWIALDMIESKHGTLPLDVTAEKYIDELKAIYFLQVLERSQNDAERSSASEEMLRMHNLAHDLARSVAGEDILVILDAENERNARYCNYRYAQVSASSLESIDRKAWPSKARSLIFKNSGVDFEHVSEVLSVNKYLRVLDLSGCCVQDIPSPIFQLKQLRYLDVSSLSITALPLQISSFHKLQMLDLSETELTELPPFISNLKGLNYLNLQGCQKLQRLNSLHLLHDLHYLNLSCCPEVTSFPESIENLTKLRFLNLSGCSKLSTLPIRFLESFASLCSLVDLNLSGFEFQMLPDFFGNIYSLQYLNLSKCLKLEVLPQSFGQLAYLKSLNLSYCSDLKLLESFECLTSLRFLNLSNCSRLEYLPSCFDKLNNLESLNLSQCLGLKALPESLQNLKNLQLDVSGCQDCIVQSFSLSTRSSQSCQRSEKAEQVRSRNSEISEITYEEPAEIELLKNNPSKDLASISHLNEDRIEEPEVVTEPSATRGMVQQIPGNQLSSPSSHLSSFASSSAPFASSSSDTSTSEHPVPNEEAAALTVPRSKEKCDNTPMP |
| superfamily: SSF52540 | 154-401 | SSF52540 | HYFEEKQTTSYRNTDIAIVGRDADLDHLMDLLMQNSAEELCIIPIVGPVGFGKTSLAQLVFNDTRTEVFSFRIWVHVSMGNINLEKIGRDIVSQTTEKIEGNMQLQSIKNAVQRVLNKYSCLIIIDSLWGKDEEVNELKQMLLTGRHTESKIIVTTHSNKVAKLISTVPLYKLAALSEDDCLKIFSQRAMTGPGDPLFREYGEEIVRRCEGTPLVANFLGSVVNAQRQRREIWQAAKDEEMWKIEEDY |
| Gene3D: G3DSA:3.40.50.300 | 172-315 | G3DSA:3.40.50.300 | VGRDADLDHLMDLLMQNSAEELCIIPIVGPVGFGKTSLAQLVFNDTRTEVFSFRIWVHVSMGNINLEKIGRDIVSQTTEKIEGNMQLQSIKNAVQRVLNKYSCLIIIDSLWGKDEEVNELKQMLLTGRHTESKIIVTTHSNKVA |
| HMMPfam: PF00931 IPR002182
|
175-459 | NB-ARC,NBS NB-ARC
|
DADLDHLMDLLMQNSAEELCIIPIVGPVGFGKTSLAQLVFNDTRTEVFSFRIWVHVSMGNINLEKIGRDIVSQTTEKIEGNMQLQSIKNAVQRVLNKYSCLIIIDSLWGKDEEVNELKQMLLTGRHTESKIIVTTHSNKVAKLISTVPLYKLAALSEDDCLKIFSQRAMTGPGDPLFREYGEEIVRRCEGTPLVANFLGSVVNAQRQRREIWQAAKDEEMWKIEEDYPQDKISPLFPSFKIIYYNMPHELRLCFVYCSIFPKGTVIEKKKLIQQWIALDMIESKH |
| FPrintScan: PR00364 IPR000767
|
195-210 | DISEASERSIST Disease resistance protein
|
IIPIVGPVGFGKTSLA |
| FPrintScan: PR00364 IPR000767
|
268-282 | DISEASERSIST Disease resistance protein
|
VLNKYSCLIIIDSLW |
| FPrintScan: PR00364 IPR000767
|
362-376 | DISEASERSIST Disease resistance protein
|
CEGTPLVANFLGSVV |
| superfamily: SSF52058 | 502-847 | SSF52058,LRR | RMHNLAHDLARSVAGEDILVILDAENERNARYCNYRYAQVSASSLESIDRKAWPSKARSLIFKNSGVDFEHVSEVLSVNKYLRVLDLSGCCVQDIPSPIFQLKQLRYLDVSSLSITALPLQISSFHKLQMLDLSETELTELPPFISNLKGLNYLNLQGCQKLQRLNSLHLLHDLHYLNLSCCPEVTSFPESIENLTKLRFLNLSGCSKLSTLPIRFLESFASLCSLVDLNLSGFEFQMLPDFFGNIYSLQYLNLSKCLKLEVLPQSFGQLAYLKSLNLSYCSDLKLLESFECLTSLRFLNLSNCSRLEYLPSCFDKLNNLESLNLSQCLGLKALPESLQNLKNLQL |
| Gene3D: G3DSA:3.80.10.10 | 556-727 | G3DSA:3.80.10.10 | SKARSLIFKNSGVDFEHVSEVLSVNKYLRVLDLSGCCVQDIPSPIFQLKQLRYLDVSSLSITALPLQISSFHKLQMLDLSETELTELPPFISNLKGLNYLNLQGCQKLQRLNSLHLLHDLHYLNLSCCPEVTSFPESIENLTKLRFLNLSGCSKLSTLPIRFLESFASLCSL |
| HMMPfam: PF00560 IPR001611
|
583-598 | LRR_1 Leucine-rich repeat
|
LRVLDLSGCCVQDIPS |
| HMMPfam: PF12799 | 628-668 | LRR_4,Leucine Rich repeats (2 copies) | KLQMLDLSETELTELPPFISNLKGLNYLNLQGCQKLQRLNS |
| HMMPfam: PF00560 IPR001611
|
675-696 | LRR_1 Leucine-rich repeat
|
LHYLNLSCCPEVTSFPESIENL |
| FPrintScan: PR00364 IPR000767
|
694-710 | DISEASERSIST Disease resistance protein
|
ENLTKLRFLNLSGCSKL |
| HMMPfam: PF00560 IPR001611
|
698-719 | LRR_1 Leucine-rich repeat
|
KLRFLNLSGCSKLSTLPIRFLE |
| Gene3D: G3DSA:3.80.10.10 | 728-853 | G3DSA:3.80.10.10 | VDLNLSGFEFQMLPDFFGNIYSLQYLNLSKCLKLEVLPQSFGQLAYLKSLNLSYCSDLKLLESFECLTSLRFLNLSNCSRLEYLPSCFDKLNNLESLNLSQCLGLKALPESLQNLKNLQLDVSGCQ |
| HMMPfam: PF13855 | 749-805 | LRR_8,Leucine rich repeat | SLQYLNLSKCLKLEVLPQSFGQLAYLKSLNLSYCSDLKLLESFECLTSLRFLNLSNC |
| HMMPfam: PF00560 IPR001611
|
820-842 | LRR_1 Leucine-rich repeat
|
NLESLNLSQCLGLKALPESLQNL |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Rice blast disease | Magnaporthe grisea |
List of References
Sang-Kyu Lee, Min-Young Song, Young-Su Seo, Hye-Kyung Kim, Seho Ko, Pei-Jian Cao, Jung-Pil Suh, Gihwan Yi, Jae-Hwan Roh, Sichul Lee, Gynheung An, Tae-Ryong Hahn, Guo-Liang Wang, Pamela Ronald, Jong-Seong Jeon
Rice Pi5-mediated resistance to Magnaporthe oryzae requires the presence of two coiled-coil-nucleotide-binding-leucine-rich repeat genes.
Genetics: 2009, 181(4);1627-38
PubMed:19153255
WorldCat.org
DOI
(P p)
List of Contributions
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