PRGDB00061464 (KR1)
| KR1 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 18033110 (AF327903) |
| Gene Class | TNL |
| Domain Type | NBS, TIR, LRR, Others |
| Gene Species | Glycine max |
DNA Sequence
ATGGCTAAGCAATCATCCTCATCTTCCTTTAGTTACAGATTCAGCAACGATGTGTTCCTCAGCTTCCGAGGGGAAGATACTCGTCGCGGTTTTACTGGCAATCTCTATAAAGCTCTCTCTGACAGGGGAATTCACACCTTCATGGATGACAAGAAGATCCCTAGAGGAGACCAAATCACCTCAGGACTTGAGAAGGCAATTGAAGAGTCCAGAATATTCATCATCGTGCTCTCTGAAAACTATGCATCGTCCTCCTTCTGCTTAAACGAACTTGATTACATCCTTAAGTTTATTAAGGGGAAGGGCATATTGATTTTGCCAGTTTTTTATAAGGTTGACCCTTCTGATGTGAGAAACCACACTGGTAGTTTTGGAAAGGCGTTGACTAATCATGAAAAGAAGTTCAAAAGTACTAATGACATGGAGAAGCTGGAAACATGGAAGATGGCTCTGAACAAAGTGGCTAATTTATCTGGTTACCATCATTTCAAACATGGGGAAGAATACGAATATGAATTTATTCAGAGGATTGTTGAGTTGGTCTCTAAGAAGATTAATCGTGCTCCTTTACATGTTGCGGATTATCCAGTTGGACTAGAGTCACGAATACAAGAAGTAAAAGCGCTTCTGGATGTTGGATCTGATGATGTTGTCCACATGCTGGGTATACATGGGCTCGGTGGAGTAGGTAAAACGACACTTGCTGCTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTGTGTTTCCTTCAAAACGTGAGAGAAACTTCAAAGAAACATGGGTTACAACATCTACAAAGAAACCTTCTTTCTGAAATGGCCGGAGAGGATAAGTTAATAGGTGTCAAACAAGGAATTTCCATAATAGAGCATAGGCTCCGGCAAAAGAAGGTTCTTTTGATTCTCGATGATGTTGACAAAAGGGAACAGCTACAGGCGCTTGCTGGAAGACCTGATTTGTTTGGTCCTGGCAGTAGAGTCATCATCACGACTCGGGACAAACAATTGCTAGCATGTCACGGTGTTGAAAGAACATATGAGGTGAATGAATTGAATGAGGAATATGCTCTTGAGTTACTTAATTGGAAAGCTTTCAAGTTGGAAAAAGTTGATCCATTTTACAAGGATGTTTTGAATCGAGCAGCAACTTATGCTTCAGGCCTTCCATTGGCTTTAGAAGTAATAGGTTCCAACTTATCCGGAAAAAATATAGAACAATGGATATCTGCTTTAGATCGATACAAAAGAATCCCTAATAAAGAGATCCAAGAGATACTTAAAGTGAGTTATGATGCTTTGGAAGAGGATGAGCAAAGTATTTTTCTTGACATTGCTTGTTGCTTCAAAAAATATGATTTGGCAGAGGTCCAAGATATACTTCATGCTCATCATGGCCATTGCATGAAACATCATATTGGAGTGTTGGTTGAAAAATCTCTCATAAAGATTAGTTTGGATGGCTATGTTACACTACATGACTTGATAGAGGACATGGGTAAAGAAATTGTCCGGAAAGAATCTCCCCAAGAGCCTGGGAAACGTAGTAGGTTATGGCTACCTACAGATATAGTTCAAGTTTTAGAAGAGAACAAGGGAACTAGTCATATTGGAATCATATGCATGAATTTCTACTCCTCATTTGAAGAAGTAGAAATACAGTGGGATGGAGATGCCTTCAAAAAGATGAAAAATCTCAAGACACTTATTATCAGAAGTGGTCATTTCTCCAAAGGTCCCAAACATTTTCCTAAGAGTTTAAGAGTATTGGAATGGTGGAGATATCCTTCACATTATTTTCCATATGATTTTCAAATGGAGAAGCTTGCTATATTCAACTTACCCGACTGTGGGTTTACTTCACGTGAGTTGGCTGCCATGTTAAAAAAGAAGTTTGTGAATCTGACAAGTCTAAATTTTGACTCATGTCAACATTTAACACTGATACCTGATGTATCTTGTGTCCCACATTTGCAAAAATTGTCATTTAAAGATTGTGATAATTTATATGCCATTCACCCGTCAGTAGGCTTCTTGGAAAAACTGAGAATCTTGGACGCAGAAGGTTGCTCCAGGCTTAAGAATTTCCCCCCCATCAAGTTGACCTCTCTTGAGCAACTCAAACTTGGGTTTTGTCACAGCCTTGAGAATTTTCCAGAAATATTAGGAAAGATGGAAAACATAACAGAACTTGACTTGGAACAAACTCCTGTAAAAAAATTCCCTCTTTCATTTCAAAATCTTACTCGGCTTGAAACTGTACTTCTGTGTTTCCCTCGAAACCAGGCAAACGGTTGTACTGGCATTTTCCTTTCGAACATTTGCCCGATGCAAGAAAGCCCGGAACTGATCAATGTCATAGGTGTGGGATGGGAAGGGTGTCTATTCCGTAAAGAGGATGAGGGTGCAGAGAATGTGAGCTTAACCACATCTTCAAACGTTCAATTTCTTGATCTCAGAAACTGCAACCTGTCAGATGATTTTTTTCCGATAGCTCTCCCATGCTTTGCTAATGTAATGGAGTTAAACCTATCAGGGAATAATTTCACAGTTATTCCCGAATGCATCAAAGAATGCCGCTTTTTAACAACACTTTACTTGAATTATTGTGAGCGACTTCGAGAAATTAGAGGGATTCCTCCAAACTTGAAATATTTCTATGCAGAAGAATGCCTATCATTGACTTCCTCATGTAGAAGCATGTTACTCAGTCAGGAACTGCATGAGGCTGGAAGAACCTTCTTCTATTTGCCAGGAGCCAAGATTCCAGAGTGGTTTGATTTCCAAACATCGGAATTTCCAATTTCTTTCTGGTTTCGTAACAAATTCCCAGCCATTGCTATTTGTCATATTATCAAACGGGTGGCTGAGTTTTCCTCATCGAGAGGTTGGACATTTAGACCCAACATTAGAACCAAGGTGATCATCAATGGCAATGCAAATTTGTTTAACTCTGTGGTGTTGGGAAGTGATTGTACATGTCTTTTTGATCTGCGGGGTGAAAGAGTAACAGATAATTTAGATGAAGCACTTTTAGAAAATGAATGGAACCATGCAGAAGTTACATGTCCAGGTTTTACTTTTACTTTTGCCCCAACCTTTATAAAAACTGGACTACATGTATTGAAACAGGAAAGTAACATGGAGGATATTCGATTCTCTGATCCTTGTAGAAAAACAAAATTGGATAATGATTTCAATAGTTCAAAACCAAAAAATCAAAGATGGGTGGGCAATGATGTTGCCAAGACACAAGTTGTGCAGCAGCAACAACTTATGGGCTCTTTTTTGTCACGCATGTGGCACTGGGCACTAGTGTTTCTCATTTCTTTCCTAGTGTTTCTCATTTCTTGCCGCCGCAACAATCAATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| functional candidate resistance protein KR1 | functional candidate resistance protein KR1 [Glycine max]. | MAKQSSSSSFSYRFSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMQESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEECLSLTSSCRSMLLSQELHEAGRTFFYLPGAKIPEWFDFQTSEFPISFWFRNKFPAIAICHIIKRVAEFSSSRGWTFRPNIRTKVIINGNANLFNSVVLGSDCTCLFDLRGERVTDNLDEALLENEWNHAEVTCPGFTFTFAPTFIKTGLHVLKQESNMEDIRFSDPCRKTKLDNDFNSSKPKNQRWVGNDVAKTQVVQQQQLMGSFLSRMWHWALVFLISFLVFLISCRRNNQ |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
4-160 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
QSSSSSFSYRFSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGY |
| ProfileScan: PS50104 IPR000157
|
14-157 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
FSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANL |
| HMMSmart: SM00255 IPR000157
|
15-157 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
SNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANL |
| Gene3D: G3DSA:3.40.50.10140 | 16-148 | G3DSA:3.40.50.10140 | NDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWK |
| HMMPfam: PF01582 IPR000157
|
18-152 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
VFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALN |
| HMMPanther: PTHR11017 | 46-892 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | TFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMQESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEEC |
| HMMPanther: PTHR11017:SF20 | 46-892 | PTHR11017:SF20,SUBFAMILY NOT NAMED | TFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMQESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEEC |
| superfamily: SSF52540 | 179-424 | SSF52540 | ELVSKKINRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEI |
| Gene3D: G3DSA:3.40.50.300 | 198-309 | G3DSA:3.40.50.300 | GLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDK |
| HMMPfam: PF00931 IPR002182
|
200-457 | NB-ARC,NBS NB-ARC
|
ESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAE |
| FPrintScan: PR00364 IPR000767
|
220-235 | DISEASERSIST Disease resistance protein
|
MLGIHGLGGVGKTTLA |
| FPrintScan: PR00364 IPR000767
|
294-308 | DISEASERSIST Disease resistance protein
|
RLRQKKVLLILDDVD |
| FPrintScan: PR00364 IPR000767
|
387-401 | DISEASERSIST Disease resistance protein
|
ASGLPLALEVIGSNL |
| superfamily: SSF46785 | 422-530 | SSF46785 | KEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLE |
| Gene3D: G3DSA:1.10.10.10 IPR011991
|
424-494 | Wing_hlx_DNA_bd Winged helix-turn-helix transcription repressor DN
|
IQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLH |
| superfamily: SSF52058 | 504-912 | SSF52058,LRR | IVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMQESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEECLSLTSSCRSMLLSQELHEAG |
| Gene3D: G3DSA:3.80.10.10 | 558-757 | G3DSA:3.80.10.10 | GDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLL |
| FPrintScan: PR00364 IPR000767
|
678-694 | DISEASERSIST Disease resistance protein
|
GFLEKLRILDAEGCSRL |
| Gene3D: G3DSA:3.80.10.10 | 812-896 | G3DSA:3.80.10.10 | SSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEECLSLT |
| HMMPfam: PF00560 IPR001611
|
814-838 | LRR_1 Leucine-rich repeat
|
NVQFLDLRNCNLSDDFFPIALPCFA |
| HMMPfam: PF00560 IPR001611
|
841-858 | LRR_1 Leucine-rich repeat
|
MELNLSGNNFTVIPECIK |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Soybean mosaic virus |
List of References
Chao-Ying He, Ai-Guo Tian, Jin-Song Zhang, Zhi-Yong Zhang, Jun-Yi Gai, Shou-Yi Chen
Isolation and characterization of a full-length resistance gene homolog from soybean.
Theor. Appl. Genet.: 2003, 106(5);786-93
PubMed:12647051
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.
