PRGDB00061468 (Lr21)
Lr21 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 226424825 (FJ876280) |
Gene Class | CNL |
Domain Type | NBS, LRR, Others |
Gene Species | Triticum aestivum |
DNA Sequence
ATGGCTACTGCTTGGGACGTTGCCTCTGTTGGTTGGTCCATGGTCGTGTTGGGCTGGTTGGTGTCGCCTGTCATCACCTTGATCCTGCCCAAGATCCTTTCCCGCCTGGGTTTCGATGCGGCACAGAAGCTCCAGGGGCTAGTGATCAGCATCATGCCCGAGATGGAGAACACGCTGCGGGCCGTAGATCAGGAGAGGATGATGCTGAGAGGAAAGAAATCAAACTCCGATGTGGCCGCACTGGACAAGATGGCCGCCATGCTGAGGCACGCTCGGGAGGATGCAGAGGACATCTTCGATGATGCTCATGAGAAGATCTGCGTCGGAGACTTCCTCTACGGCGTCGTGCAATCCTTCCTCGACGGGATTGCACGCATCATTCGGAGCAGATGGGCTTGGCTAATGCAGTGGGCACGGAGGAGCTCTTTGTGTCGTTTCCTTGAGCACGCTTCCGGTGAGGCCGTCACTATCGGTGTTGCCGCCTCAAATGAGCCCGGTCATGTGACTATAAATGTTGCGGCGCCCTCTGGCGGCGAGTCTATTCCGGTAACTACCAGTGCTGCAGCCTCACACGAACCAACAGCTCCATCCTCCGATTCCTTGGGGCGGTGTCTCTCTTGCTTTTCCAGCTCCTTCAACTTCGTCAAGTACTATTGTACATCCAGCTTCAACTGGTTACGCTTTTACCGAGATTGGTCCTATGAGGTGGTTGGTGTCACAACTTATCAGGAGAATGCCACTGCATTGGATGTTGTCCTTACTGCTATCTCAAGATGGAACTTGAATAAAAGAATAGAGAAGGTACAAAGTACCATCAGCGAAGTGACGAAGTCACCGCTCTTGGGCACGGCAAGCAAGAGTGCACCAGACGATATTGCTAACAAGAATAGGAGTAGAATTAGAACTGCTAGCAAGCGGAAGGTATTTGGTCGAGAGGGGCTGCGTGATCATATCATGGTAAGGCTTCGTGAGATACCAGAGCATGATGCAGCAAGCTCAAGTGCTGATCCATGTTACTCAGTGATTGGTATATATGGTGTTGCTGGGTCTGGGAAGACCACGTTTGCAGGATATATTCAAGATTACATAAAGGAGGAATGCAAGGATGAGAAACTTTTCGACACCATCATGTGCATTCATGTGACTGAAACTTTCAGTGTGGATGATATATTTCATGAAATGCTGAAGTATATTACCGGAGATAGTCACTCCAATATTTCAGATCGTGGGGCTCTAGATAAGAAGTTGAAGGAAGCATTGTGTGGCAAACGTTTCTTCTTGATATTGGATGATCTCTGGGTGAAAAACAAGAATGACCAACACCTAGAGGAGCTAATCTCTCCACTCAATGTTGGGCTGAAAGGAAGCAAAATCCTGGTGACGGCTCGAACAAAAGAAGCAGCTGGAGCTCTGGGTGCCGATAAATTTATTGAAATGCCTGATTTGGATGAGGATCAGTACTTGGCGATGTTTATGCATTATGCGCTAAGTGATACAAGAGTTGCCCTTCAAGAATTTGAACAAGTTGGGAGAGAGATTGCCAAAAAACTACACCGATCACCTATTGCAGCAGTAACAGTTGCAGGACGGCTTGGGGCAAACCCAAATATCAGTTTTTGGAAAAATGTTGCAAAGCTTGACATGTTGAATTACACCATGGATGCTCTTTGGTGGAGCTATCAGCAGCTTGATCCGGACATTAGGCGATGCTTTGAATTCTGCAGTATTTTCCCCAGAAAATTCAAACTGGAAAAAGACCAATTAGTCCGCCTGTGGACAGCACAAGGATTTGTAAAGACCAGTTGTGCAACGGAGGAGATGGAAGATGTTGCCGAGGGCTACATTCAAGAGTTAGTGTCATGCTCATTTCTGCAAGAAAAAGGAACTGGTTCTGGCGTTGATCATTTTACAATTCATGATCTGTTGCATGATTTATTAGTCAAGGTTGCTGGAAATGATTGCTTCAGAATCGAGAATAGATGGAGTAAACAAGGAGAATGCCAAGAAGATGTCCCTCGAGATGTCCGTCATCTTTTTGTTCAGAAGTATGATGGGGAATTGATTACCAGGAAGATCCTTGGATTGGAAAATTTACGCACTCTCATTATTTGTGTTGTCGAAGAGAATAGACCAGTTGAGGAAAAGGTCATTGAGAGTATGTGCGTGAGGCTGCTGAAGTTGCGGGTACTGGCCATTGCTTTCAACAAAAAATGCCGTTCAACCAGCAATCCCAGTGATAAGTTCTTGGTCCCAGAATCCATTACTCAGTTAAAGCACCTCCGCTATCTAGCTTTCCGGAAAAGTGACAACTGCAAGGTTATTTTGCCAAGTGCACTAGCTAAACTTCTCCATATCCAGCTGCTAGATTTTGGTCTTGGCAAAATTTCGGATTTTACCTGTGCTGCTGACCTTATCAACTTGCGGCACATATTCTGCTGGGATGTGAGCTTTCCTAACATAGGCACGCTGAGCTCACTTCAAAGAATACCCTTCTTCAGGCTAAGGAATGAACAGGGTTATGAGATAAAACAACTTAGGGACCTGAACAAGATTCGTGGCATGCTGGTGGTCAATGGCTTTGAAAATGTTAAAAGCAAGGAGGAAGCTCTTGAAGCCAATCTAGCTGCCAAGGAAAGGCTCACGGAACTGATACTATGTTTTTTGACTTCCCATACACGGGGCAATGGCAATGCGGAAGTTGCAGCAGAGGTGCTTGAGGGCCTGTGCCCTCCCGTGGGGCTAGAAGCACTGCTCATCTATGACTACAACGGCTCAAGGTACCCAGATTGGATGGTGGGTAAGCTGACCGGTGGCCCAAAGAACCTGAAACTACTTGAAATCTATGGCTGCAGCCGACTGGGACCTGGCCCTCAACTTGAGGCTTTCCCTCATCTTCGTATGCTCAACCTTGAGGACTGCAGCTGGGACGCCTTACCAGGCAACTTGGAGCACCTCACTTCGCTCAAGGCACTGAAGATCGAGCATTGCATGAATATCCGGTCGCTTCCAACACTGCCCCAGTCTCTGAAGCTGTTCATACTTCGGTGCTGCGATGTTGAGCTCATGAAGAGTTGTGAAACAGAAGGAGATCCAAACTGGCATAAGATAAAGCACATCCCCGATAAAATGGTTTCAGGCCAACCTCACAGCATCTACCACATCAGGAGAATGTTCCGAGTGTCGGCCCCAGTCCCGACGCTGAGTACTTCCGGTGACGGCGACACGACCGACGAACGAAGATGA
Protein sequences
Name | Description | Sequence |
---|---|---|
Lr21 | Lr21 [Triticum aestivum]. | MATAWDVASVGWSMVVLGWLVSPVITLILPKILSRLGFDAAQKLQGLVISIMPEMENTLRAVDQERMMLRGKKSNSDVAALDKMAAMLRHAREDAEDIFDDAHEKICVGDFLYGVVQSFLDGIARIIRSRWAWLMQWARRSSLCRFLEHASGEAVTIGVAASNEPGHVTINVAAPSGGESIPVTTSAAASHEPTAPSSDSLGRCLSCFSSSFNFVKYYCTSSFNWLRFYRDWSYEVVGVTTYQENATALDVVLTAISRWNLNKRIEKVQSTISEVTKSPLLGTASKSAPDDIANKNRSRIRTASKRKVFGREGLRDHIMVRLREIPEHDAASSSADPCYSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVAGRLGANPNISFWKNVAKLDMLNYTMDALWWSYQQLDPDIRRCFEFCSIFPRKFKLEKDQLVRLWTAQGFVKTSCATEEMEDVAEGYIQELVSCSFLQEKGTGSGVDHFTIHDLLHDLLVKVAGNDCFRIENRWSKQGECQEDVPRDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVPTLSTSGDGDTTDERR |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52540 | 306-528 | SSF52540 | RKVFGREGLRDHIMVRLREIPEHDAASSSADPCYSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVA |
HMMPfam: PF00931 IPR002182
|
339-601 | NB-ARC,NBS NB-ARC
|
YSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVAGRLGANPNISFWKNVAKLDMLNYTMDALWWSYQQLDPDIRRCFEFCSIFPRKFKLEKDQLVRLWTAQGFVKTS |
Gene3D: G3DSA:3.40.50.300 | 341-410 | G3DSA:3.40.50.300 | VIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRG |
FPrintScan: PR00364 IPR000767
|
341-356 | DISEASERSIST Disease resistance protein
|
VIGIYGVAGSGKTTFA |
FPrintScan: PR00364 IPR000767
|
419-433 | DISEASERSIST Disease resistance protein
|
ALCGKRFFLILDDLW |
superfamily: SSF52058 | 637-1061 | SSF52058,LRR | TIHDLLHDLLVKVAGNDCFRIENRWSKQGECQEDVPRDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVS |
HMMPanther: PTHR23155 | 673-1065 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | RDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVP |
HMMPanther: PTHR23155:SF143 | 673-1065 | PTHR23155:SF143,OS04G0325300 PROTEIN (FRAGMENT) | RDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVP |
Gene3D: G3DSA:3.80.10.10 | 688-834 | G3DSA:3.80.10.10 | ITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRL |
Gene3D: G3DSA:3.80.10.10 | 937-1015 | G3DSA:3.80.10.10 | GGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILR |
FPrintScan: PR00364 IPR000767
|
983-999 | DISEASERSIST Disease resistance protein
|
EHLTSLKALKIEHCMNI |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Wheat leaf rust | Puccinia triticina |
List of References
Li Huang, Steven Brooks, Wanlong Li, John Fellers, James C Nelson, Bikram Gill
Evolution of new disease specificity at a simple resistance locus in a crop-weed complex: reconstitution of the Lr21 gene in wheat.
Genetics: 2009, 182(2);595-602
PubMed:19364806
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.