PRGDB00061468 (Lr21)
| Lr21 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 226424825 (FJ876280) |
| Gene Class | CNL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Triticum aestivum |
DNA Sequence
ATGGCTACTGCTTGGGACGTTGCCTCTGTTGGTTGGTCCATGGTCGTGTTGGGCTGGTTGGTGTCGCCTGTCATCACCTTGATCCTGCCCAAGATCCTTTCCCGCCTGGGTTTCGATGCGGCACAGAAGCTCCAGGGGCTAGTGATCAGCATCATGCCCGAGATGGAGAACACGCTGCGGGCCGTAGATCAGGAGAGGATGATGCTGAGAGGAAAGAAATCAAACTCCGATGTGGCCGCACTGGACAAGATGGCCGCCATGCTGAGGCACGCTCGGGAGGATGCAGAGGACATCTTCGATGATGCTCATGAGAAGATCTGCGTCGGAGACTTCCTCTACGGCGTCGTGCAATCCTTCCTCGACGGGATTGCACGCATCATTCGGAGCAGATGGGCTTGGCTAATGCAGTGGGCACGGAGGAGCTCTTTGTGTCGTTTCCTTGAGCACGCTTCCGGTGAGGCCGTCACTATCGGTGTTGCCGCCTCAAATGAGCCCGGTCATGTGACTATAAATGTTGCGGCGCCCTCTGGCGGCGAGTCTATTCCGGTAACTACCAGTGCTGCAGCCTCACACGAACCAACAGCTCCATCCTCCGATTCCTTGGGGCGGTGTCTCTCTTGCTTTTCCAGCTCCTTCAACTTCGTCAAGTACTATTGTACATCCAGCTTCAACTGGTTACGCTTTTACCGAGATTGGTCCTATGAGGTGGTTGGTGTCACAACTTATCAGGAGAATGCCACTGCATTGGATGTTGTCCTTACTGCTATCTCAAGATGGAACTTGAATAAAAGAATAGAGAAGGTACAAAGTACCATCAGCGAAGTGACGAAGTCACCGCTCTTGGGCACGGCAAGCAAGAGTGCACCAGACGATATTGCTAACAAGAATAGGAGTAGAATTAGAACTGCTAGCAAGCGGAAGGTATTTGGTCGAGAGGGGCTGCGTGATCATATCATGGTAAGGCTTCGTGAGATACCAGAGCATGATGCAGCAAGCTCAAGTGCTGATCCATGTTACTCAGTGATTGGTATATATGGTGTTGCTGGGTCTGGGAAGACCACGTTTGCAGGATATATTCAAGATTACATAAAGGAGGAATGCAAGGATGAGAAACTTTTCGACACCATCATGTGCATTCATGTGACTGAAACTTTCAGTGTGGATGATATATTTCATGAAATGCTGAAGTATATTACCGGAGATAGTCACTCCAATATTTCAGATCGTGGGGCTCTAGATAAGAAGTTGAAGGAAGCATTGTGTGGCAAACGTTTCTTCTTGATATTGGATGATCTCTGGGTGAAAAACAAGAATGACCAACACCTAGAGGAGCTAATCTCTCCACTCAATGTTGGGCTGAAAGGAAGCAAAATCCTGGTGACGGCTCGAACAAAAGAAGCAGCTGGAGCTCTGGGTGCCGATAAATTTATTGAAATGCCTGATTTGGATGAGGATCAGTACTTGGCGATGTTTATGCATTATGCGCTAAGTGATACAAGAGTTGCCCTTCAAGAATTTGAACAAGTTGGGAGAGAGATTGCCAAAAAACTACACCGATCACCTATTGCAGCAGTAACAGTTGCAGGACGGCTTGGGGCAAACCCAAATATCAGTTTTTGGAAAAATGTTGCAAAGCTTGACATGTTGAATTACACCATGGATGCTCTTTGGTGGAGCTATCAGCAGCTTGATCCGGACATTAGGCGATGCTTTGAATTCTGCAGTATTTTCCCCAGAAAATTCAAACTGGAAAAAGACCAATTAGTCCGCCTGTGGACAGCACAAGGATTTGTAAAGACCAGTTGTGCAACGGAGGAGATGGAAGATGTTGCCGAGGGCTACATTCAAGAGTTAGTGTCATGCTCATTTCTGCAAGAAAAAGGAACTGGTTCTGGCGTTGATCATTTTACAATTCATGATCTGTTGCATGATTTATTAGTCAAGGTTGCTGGAAATGATTGCTTCAGAATCGAGAATAGATGGAGTAAACAAGGAGAATGCCAAGAAGATGTCCCTCGAGATGTCCGTCATCTTTTTGTTCAGAAGTATGATGGGGAATTGATTACCAGGAAGATCCTTGGATTGGAAAATTTACGCACTCTCATTATTTGTGTTGTCGAAGAGAATAGACCAGTTGAGGAAAAGGTCATTGAGAGTATGTGCGTGAGGCTGCTGAAGTTGCGGGTACTGGCCATTGCTTTCAACAAAAAATGCCGTTCAACCAGCAATCCCAGTGATAAGTTCTTGGTCCCAGAATCCATTACTCAGTTAAAGCACCTCCGCTATCTAGCTTTCCGGAAAAGTGACAACTGCAAGGTTATTTTGCCAAGTGCACTAGCTAAACTTCTCCATATCCAGCTGCTAGATTTTGGTCTTGGCAAAATTTCGGATTTTACCTGTGCTGCTGACCTTATCAACTTGCGGCACATATTCTGCTGGGATGTGAGCTTTCCTAACATAGGCACGCTGAGCTCACTTCAAAGAATACCCTTCTTCAGGCTAAGGAATGAACAGGGTTATGAGATAAAACAACTTAGGGACCTGAACAAGATTCGTGGCATGCTGGTGGTCAATGGCTTTGAAAATGTTAAAAGCAAGGAGGAAGCTCTTGAAGCCAATCTAGCTGCCAAGGAAAGGCTCACGGAACTGATACTATGTTTTTTGACTTCCCATACACGGGGCAATGGCAATGCGGAAGTTGCAGCAGAGGTGCTTGAGGGCCTGTGCCCTCCCGTGGGGCTAGAAGCACTGCTCATCTATGACTACAACGGCTCAAGGTACCCAGATTGGATGGTGGGTAAGCTGACCGGTGGCCCAAAGAACCTGAAACTACTTGAAATCTATGGCTGCAGCCGACTGGGACCTGGCCCTCAACTTGAGGCTTTCCCTCATCTTCGTATGCTCAACCTTGAGGACTGCAGCTGGGACGCCTTACCAGGCAACTTGGAGCACCTCACTTCGCTCAAGGCACTGAAGATCGAGCATTGCATGAATATCCGGTCGCTTCCAACACTGCCCCAGTCTCTGAAGCTGTTCATACTTCGGTGCTGCGATGTTGAGCTCATGAAGAGTTGTGAAACAGAAGGAGATCCAAACTGGCATAAGATAAAGCACATCCCCGATAAAATGGTTTCAGGCCAACCTCACAGCATCTACCACATCAGGAGAATGTTCCGAGTGTCGGCCCCAGTCCCGACGCTGAGTACTTCCGGTGACGGCGACACGACCGACGAACGAAGATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Lr21 | Lr21 [Triticum aestivum]. | MATAWDVASVGWSMVVLGWLVSPVITLILPKILSRLGFDAAQKLQGLVISIMPEMENTLRAVDQERMMLRGKKSNSDVAALDKMAAMLRHAREDAEDIFDDAHEKICVGDFLYGVVQSFLDGIARIIRSRWAWLMQWARRSSLCRFLEHASGEAVTIGVAASNEPGHVTINVAAPSGGESIPVTTSAAASHEPTAPSSDSLGRCLSCFSSSFNFVKYYCTSSFNWLRFYRDWSYEVVGVTTYQENATALDVVLTAISRWNLNKRIEKVQSTISEVTKSPLLGTASKSAPDDIANKNRSRIRTASKRKVFGREGLRDHIMVRLREIPEHDAASSSADPCYSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVAGRLGANPNISFWKNVAKLDMLNYTMDALWWSYQQLDPDIRRCFEFCSIFPRKFKLEKDQLVRLWTAQGFVKTSCATEEMEDVAEGYIQELVSCSFLQEKGTGSGVDHFTIHDLLHDLLVKVAGNDCFRIENRWSKQGECQEDVPRDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVPTLSTSGDGDTTDERR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 306-528 | SSF52540 | RKVFGREGLRDHIMVRLREIPEHDAASSSADPCYSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVA |
| HMMPfam: PF00931 IPR002182
|
339-601 | NB-ARC,NBS NB-ARC
|
YSVIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRGALDKKLKEALCGKRFFLILDDLWVKNKNDQHLEELISPLNVGLKGSKILVTARTKEAAGALGADKFIEMPDLDEDQYLAMFMHYALSDTRVALQEFEQVGREIAKKLHRSPIAAVTVAGRLGANPNISFWKNVAKLDMLNYTMDALWWSYQQLDPDIRRCFEFCSIFPRKFKLEKDQLVRLWTAQGFVKTS |
| Gene3D: G3DSA:3.40.50.300 | 341-410 | G3DSA:3.40.50.300 | VIGIYGVAGSGKTTFAGYIQDYIKEECKDEKLFDTIMCIHVTETFSVDDIFHEMLKYITGDSHSNISDRG |
| FPrintScan: PR00364 IPR000767
|
341-356 | DISEASERSIST Disease resistance protein
|
VIGIYGVAGSGKTTFA |
| FPrintScan: PR00364 IPR000767
|
419-433 | DISEASERSIST Disease resistance protein
|
ALCGKRFFLILDDLW |
| superfamily: SSF52058 | 637-1061 | SSF52058,LRR | TIHDLLHDLLVKVAGNDCFRIENRWSKQGECQEDVPRDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVS |
| HMMPanther: PTHR23155 | 673-1065 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | RDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVP |
| HMMPanther: PTHR23155:SF143 | 673-1065 | PTHR23155:SF143,OS04G0325300 PROTEIN (FRAGMENT) | RDVRHLFVQKYDGELITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRLRNEQGYEIKQLRDLNKIRGMLVVNGFENVKSKEEALEANLAAKERLTELILCFLTSHTRGNGNAEVAAEVLEGLCPPVGLEALLIYDYNGSRYPDWMVGKLTGGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILRCCDVELMKSCETEGDPNWHKIKHIPDKMVSGQPHSIYHIRRMFRVSAPVP |
| Gene3D: G3DSA:3.80.10.10 | 688-834 | G3DSA:3.80.10.10 | ITRKILGLENLRTLIICVVEENRPVEEKVIESMCVRLLKLRVLAIAFNKKCRSTSNPSDKFLVPESITQLKHLRYLAFRKSDNCKVILPSALAKLLHIQLLDFGLGKISDFTCAADLINLRHIFCWDVSFPNIGTLSSLQRIPFFRL |
| Gene3D: G3DSA:3.80.10.10 | 937-1015 | G3DSA:3.80.10.10 | GGPKNLKLLEIYGCSRLGPGPQLEAFPHLRMLNLEDCSWDALPGNLEHLTSLKALKIEHCMNIRSLPTLPQSLKLFILR |
| FPrintScan: PR00364 IPR000767
|
983-999 | DISEASERSIST Disease resistance protein
|
EHLTSLKALKIEHCMNI |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Wheat leaf rust | Puccinia triticina |
List of References
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