PRGDB00061469 (Lr1)
| Lr1 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 152060785 (EF439840) |
| Gene Class | CNL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Triticum aestivum |
DNA Sequence
ATGGCGGCGGCTCTCGGCTCGGCGGCCACGCTCCTCGGCAAGGTGTTCACTATGCTGTCCGCCGCCCCGGTGGCGGCGTACGTGGACAGCCTGGAGCTCGGCCACAACTCCCAGCAGATCAGGGCCAAGCTCGCGCACACGCGAGGCCTGCTGCACAACGCCCAAGCCCAGGTGAGCGACGTCGGCCACAACCCTGGACTGCAGGAGCTGCTGCCGGCGCTGAGCAGGAACGCCGACGAGGCGGAGGATCTGCTGGATGAGCTCCACTACTTCCAGATCCATGACAGGCTCCACGCCACCAACTACGCCGCCACCCAGGCCAATTTTCTCCGTCATGCTCGCAATGCTCTCCGCCACACTGCCACCAGCAGCTGGGCCGCATGCTTTTCTTGTTCCTCTGCACAAGATGATAGTGATTCTACCAGTGGGGATGATGAGTTACGTTTCCACCGAGTGATCTTCTCCAGAAAATTCAAGTCGGTGTTACAGGACATGCAGACGCACTGTGATTCCGTCTCTGATTTGCTCGGCACTATCCCAACCAGCAGCATGCCAGTTGCTGTACACCGGCCGCAGATTGGATCCACAATTATACAAGATACATTGTATGGCAGGAGACACACTTTTGAGGAAACTGTCAACCGTATCTTCAGCTGCAAACACCCTGTTTCTGTTCTTCCTATAGTTGGTCCAGGGGGTATTGGAAAGACAACTTTTGCTCAACATCTGTATAATGATGCAAGGACTGAAGAGCACTTCCAAGTCAGGGTCTGGGTGTGTGTATCCACTGATTTCAATGTGCTTAAGCTCACCAGGGAGATCCTTGCCTGCATACCTGCAACTGAAGAAGGAGGAAGCAGCAGTGTTGCAAATGAAACAACCAATTTAGATCATCTTCAGAGATCCATTGTGCGCCGTCTCAAGTCCAAGAGGTTTCTAATTGTCTTGGACGATATATGGAAATGTGACAGTCAGGATCAGTGGAAAACCTTGTTAGCTCCCTTCACAAAGGGGGAAACCAAAGGAAGCATGCTACTTGTCACAACTCGATTTCCAAAGCTAGCACAAATGATGGAAACAATTGATCCACTAGAGCTGCTAGGTTTGGAGTCTAATGACTTCTTCACATTCTTTGAAGCATGTATATTTGGTGAAGACAACAAGCCAGAGCATTTCGAAGATGAGTTAGCTGGTATTGCACAAAAAATTGCAGACAAGCTAAAGGGTTCCCCGCTGGCAGCCAAAACAGTTGGTAGACTATTGCACAAGGACCTTTCTCAGAAACATTGGAATGGAGTTCTTGAAAAGCATCAGTGGCTAAAGCAGCAAAATAATGATGATATCATGCCATCTTTAAAAATTAGCTATGATTGCCTCCCTTTTGATCTGAAGAAATGTTTTTCCTATTGTGGCCTTTTCCCCGAAGATCATTGGTTTACTTCTTCAGAAATCAATCATTTCTGGGTTGCAGTAGGCATCATAGACTCTGATCACCAAGCCGATAGGAATTACCTGGAAGAGCTAGTGGACAATGGTTTTCTCATGAAGAAGAAAGAGTATTATTTGGATGATCGATGCAAACAAAAGGAATTTGATTGCTATGTAATGCATGATTTAATGCATGAGCTATCTAAGAGTGTTTCTGCACAAGAATGCCTCAATATAAGTGGCTTTGATTTCAGAGCTGATGCCATCCCGCAATCTGTTCGACACTTATCTATCAACATAGAAGACAGATATGATGCAAATTTTGAGGAAGAAATGTCTAAACTAAGGGAGAAGATAGACATTGCTAATGTGCGGACTTTGATGATTTTTAGAGAATATGAAGAAGAAAGAACCGCCAAGATATTGAAAGATAGCTTCAAGGAAATAAATAGTCTGCGTGTCCTATTTATAGTGGTGAAGTCTGCACAATCTTTTCCGGATATGTTTTCAAAACTTATCCACCTCCAGTACCTCAAAATTAGTTCACCTCACATTGACGGGGAAATGAGGTTACCTAGTACACTATCAAGATTTTATCACTTGAAATTCCTGGACCTAGATGATTGGCGTGGTAGTTCTGATTTGCCTGAAGACTTTAGCCACCTTGAGAATTTACATGATTTCCGTGCTGAAAGTAAACTCCACTCCAATATTCGCAATGTTGGAAAGATGAAGCATCTACAGAGGCTAGAAGAATTCCATGTTAAGAAGGAGAGCATGGGATTTGAACTGTCAGAACTTGGGCCATTGACAGAGCTTGAAGGAGGACTGACTGTACGTGGTCTTGAACACGTGGCAACCAAGGAGGAAGCTACTGCAGCCAAACTGATGTTGAAAAGGAATCTGAAGCAGTTGGAATTACTCTGGGACAGAGACCTTGGTGGACCAACTACAGATGCTGATATTCTTGATGCTCTTCAACCACACTCTAATCTTAGAGTACTTGCAATTGTAAATCATGGTGGTACCGTTGGTCCTAGCTGGTTGTGTCTTGACATCTGGTTAACAAGTTTAGAGACTCTCACTCTAGCAGGCGTATGTTGGAGCACTCTCCCGCCTTTTGCGAAGCTACCAAATCTCAAGGGACTCAAACTGATGAGAATTTCTGGAATGCATCAGTTTGGGTCTCTATGTGGTGGCACTCCAGGGAAATGTTTTATGCGCTTGAAGACAGTTGAGTTTTATGAGATGCCAGAACTTGCTGAATGGGTTGTGGAATCTAATTGCCATTCCTTTCCAAGTCTTGAAGAAATCAGATGCAGAAATTGTCCCAACCTCCGTGTGATGCCCTTCTCGGAGGTATCTTTCACCAATTTGCGCACACTTTTTGTTTCCAGGTGCCCCAAGATGTCTCTGCCCTCCATGCCTCACACCTCCACACTGACAGATCTGAATGTTGGAATAGGTGATTCAGAAGGGTTGCATTATGATGGAAAGAAATTGATTGTTATAGGGTATGGCGGTGCTTTGGCCTCCCACAATCTGGATACAGTAGAAGATATGATTGTCGAAAGATGCGACGGTTTGTTCCCTGAAGATTTGGATGGCAGTTTTGTCTTCCGTTCAGTTAAGAATCTCACATTACATGTATCTCGTCTTACCAGCAGCAAATCATCATCGTCAAAAGTGTTAAACTGTTTCCCAGCTCTTTCTGTGTTGGTGATAGTTGGCTATGAGGAATGTGTAATGCAGTTCCCATCATCCAGCTCACTGCAGAAACTTACCTTCTCAGGCTGCCGGGGCCTGGTTCTTGTGCCTGAGGAGAAGGAGAATGGAGGAGGAATTCAGGAGGACAACTCATTGCTCCAATCATTAACAATAGTGGGATGTGGCAAACTCTTCTCTCGTTGGCCCATGGGAATGGGAGAATCAGAGACCATTTGCCCTTTCCCTGCTTCCCTGAAGAAACTTGATGTTTTCCAAGAGCCAAGCATGAAGTCAATGGCTCTGCTCTCAAACCTCACGTCTCTCACCACTCTACAGCTAAACTACTGCAGTAATTTAACAGTGGATGGATTCAATCCTCTCATCGCAGTCAACCTCATAGAGCTGCAAGTGCATAGGTGCAACACCTTAGCAGCAGATATGCTCTCAGAGGCGGCCTCTCACTCTCAGAGGGCCAAATTATTGCCTGCAGGTTACATCTCTAGATTGGAGAAACTCAATGTGGATAACAACTGTGGATTGCTTGTTGCTCCTATTTGCAACCTCCTCGCCCCGGCCCTCCACACACTTGTATTCTGGATTGATGAAACGATGGAAAGCTTGACGGAAGAGCAAGAGAAAGCGCTGCAGCTCCTCACCTCCCTCCAGAATCTAACATTTTTCAGATGCAGGGGTCTACAGTCCCTTCCTCAAGGGTTGCATCGCCTTTCTTCTCTCAAGGAGTTATGTGTCCGTGGGTGTCTAAAAATCCAATCGTTGCCCAAGGAGGGCCTCCCGCTTTCGCTGAGAAGACTAAAGATGAATTGGCGCAGCGCTGAGATAAACGAGCAAATTGAGAAAATCAAAAGAAGCAACCCAGATTTATCCGTCTCGTATTGCTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Lr1 disease resistance protein | Lr1 disease resistance protein [Triticum aestivum]. | MAAALGSAATLLGKVFTMLSAAPVAAYVDSLELGHNSQQIRAKLAHTRGLLHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSLPSMPHTSTLTDLNVGIGDSEGLHYDGKKLIVIGYGGALASHNLDTVEDMIVERCDGLFPEDLDGSFVFRSVKNLTLHVSRLTSSKSSSSKVLNCFPALSVLVIVGYEECVMQFPSSSSLQKLTFSGCRGLVLVPEEKENGGGIQEDNSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLPKEGLPLSLRRLKMNWRSAEINEQIEKIKRSNPDLSVSYC |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017:SF28 | 51-862 | PTHR11017:SF28 | LHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLM |
| HMMPanther: PTHR11017 | 51-862 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLM |
| superfamily: SSF52540 | 185-444 | SSF52540 | PVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQN |
| HMMPfam: PF00931 IPR002182
|
208-498 | NB-ARC,NBS NB-ARC
|
TFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDH |
| Gene3D: G3DSA:3.40.50.300 | 218-351 | G3DSA:3.40.50.300 | SCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRF |
| FPrintScan: PR00364 IPR000767
|
225-240 | DISEASERSIST Disease resistance protein
|
VLPIVGPGGIGKTTFA |
| FPrintScan: PR00364 IPR000767
|
306-320 | DISEASERSIST Disease resistance protein
|
RLKSKRFLIVLDDIW |
| FPrintScan: PR00364 IPR000767
|
407-421 | DISEASERSIST Disease resistance protein
|
LKGSPLAAKTVGRLL |
| superfamily: SSF52058 | 535-962 | SSF52058,LRR | VMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSLPSMPHTSTLTDLNV |
| Gene3D: G3DSA:3.80.10.10 | 618-735 | G3DSA:3.80.10.10 | LKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKES |
| Gene3D: G3DSA:3.80.10.10 | 797-948 | G3DSA:3.80.10.10 | DILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSL |
| FPrintScan: PR00364 IPR000767
|
930-946 | DISEASERSIST Disease resistance protein
|
VSFTNLRTLFVSRCPKM |
| superfamily: SSF52047 | 1035-1305 | SSF52047,LRR | SSSKVLNCFPALSVLVIVGYEECVMQFPSSSSLQKLTFSGCRGLVLVPEEKENGGGIQEDNSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLP |
| Gene3D: G3DSA:3.80.10.10 | 1056-1080 | G3DSA:3.80.10.10 | ECVMQFPSSSSLQKLTFSGCRGLVL |
| Gene3D: G3DSA:3.80.10.10 | 1095-1306 | G3DSA:3.80.10.10 | NSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLPK |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Wheat leaf rust | Puccinia triticina |
List of References
Sylvie Cloutier, Brent D McCallum, Caroline Loutre, Travis W Banks, Thomas Wicker, Catherine Feuillet, Beat Keller, Mark C Jordan
Leaf rust resistance gene Lr1, isolated from bread wheat (Triticum aestivum L.) is a member of the large psr567 gene family.
Plant Mol. Biol.: 2007, 65(1-2);93-106
PubMed:17611798
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.
