PRGDB00061469 (Lr1)

Lr1
Gene Type	Reference_R-Genes,_manually_curated
GenBank	152060785 (EF439840)
Gene Class	CNL
Domain Type	NBS, LRR, Others
Gene Species	Triticum aestivum
	Comment?

Triticum aestivum Lr1 disease resistance protein (Lr1) gene, complete cds.

DNA Sequence

ATGGCGGCGGCTCTCGGCTCGGCGGCCACGCTCCTCGGCAAGGTGTTCACTATGCTGTCCGCCGCCCCGGTGGCGGCGTACGTGGACAGCCTGGAGCTCGGCCACAACTCCCAGCAGATCAGGGCCAAGCTCGCGCACACGCGAGGCCTGCTGCACAACGCCCAAGCCCAGGTGAGCGACGTCGGCCACAACCCTGGACTGCAGGAGCTGCTGCCGGCGCTGAGCAGGAACGCCGACGAGGCGGAGGATCTGCTGGATGAGCTCCACTACTTCCAGATCCATGACAGGCTCCACGCCACCAACTACGCCGCCACCCAGGCCAATTTTCTCCGTCATGCTCGCAATGCTCTCCGCCACACTGCCACCAGCAGCTGGGCCGCATGCTTTTCTTGTTCCTCTGCACAAGATGATAGTGATTCTACCAGTGGGGATGATGAGTTACGTTTCCACCGAGTGATCTTCTCCAGAAAATTCAAGTCGGTGTTACAGGACATGCAGACGCACTGTGATTCCGTCTCTGATTTGCTCGGCACTATCCCAACCAGCAGCATGCCAGTTGCTGTACACCGGCCGCAGATTGGATCCACAATTATACAAGATACATTGTATGGCAGGAGACACACTTTTGAGGAAACTGTCAACCGTATCTTCAGCTGCAAACACCCTGTTTCTGTTCTTCCTATAGTTGGTCCAGGGGGTATTGGAAAGACAACTTTTGCTCAACATCTGTATAATGATGCAAGGACTGAAGAGCACTTCCAAGTCAGGGTCTGGGTGTGTGTATCCACTGATTTCAATGTGCTTAAGCTCACCAGGGAGATCCTTGCCTGCATACCTGCAACTGAAGAAGGAGGAAGCAGCAGTGTTGCAAATGAAACAACCAATTTAGATCATCTTCAGAGATCCATTGTGCGCCGTCTCAAGTCCAAGAGGTTTCTAATTGTCTTGGACGATATATGGAAATGTGACAGTCAGGATCAGTGGAAAACCTTGTTAGCTCCCTTCACAAAGGGGGAAACCAAAGGAAGCATGCTACTTGTCACAACTCGATTTCCAAAGCTAGCACAAATGATGGAAACAATTGATCCACTAGAGCTGCTAGGTTTGGAGTCTAATGACTTCTTCACATTCTTTGAAGCATGTATATTTGGTGAAGACAACAAGCCAGAGCATTTCGAAGATGAGTTAGCTGGTATTGCACAAAAAATTGCAGACAAGCTAAAGGGTTCCCCGCTGGCAGCCAAAACAGTTGGTAGACTATTGCACAAGGACCTTTCTCAGAAACATTGGAATGGAGTTCTTGAAAAGCATCAGTGGCTAAAGCAGCAAAATAATGATGATATCATGCCATCTTTAAAAATTAGCTATGATTGCCTCCCTTTTGATCTGAAGAAATGTTTTTCCTATTGTGGCCTTTTCCCCGAAGATCATTGGTTTACTTCTTCAGAAATCAATCATTTCTGGGTTGCAGTAGGCATCATAGACTCTGATCACCAAGCCGATAGGAATTACCTGGAAGAGCTAGTGGACAATGGTTTTCTCATGAAGAAGAAAGAGTATTATTTGGATGATCGATGCAAACAAAAGGAATTTGATTGCTATGTAATGCATGATTTAATGCATGAGCTATCTAAGAGTGTTTCTGCACAAGAATGCCTCAATATAAGTGGCTTTGATTTCAGAGCTGATGCCATCCCGCAATCTGTTCGACACTTATCTATCAACATAGAAGACAGATATGATGCAAATTTTGAGGAAGAAATGTCTAAACTAAGGGAGAAGATAGACATTGCTAATGTGCGGACTTTGATGATTTTTAGAGAATATGAAGAAGAAAGAACCGCCAAGATATTGAAAGATAGCTTCAAGGAAATAAATAGTCTGCGTGTCCTATTTATAGTGGTGAAGTCTGCACAATCTTTTCCGGATATGTTTTCAAAACTTATCCACCTCCAGTACCTCAAAATTAGTTCACCTCACATTGACGGGGAAATGAGGTTACCTAGTACACTATCAAGATTTTATCACTTGAAATTCCTGGACCTAGATGATTGGCGTGGTAGTTCTGATTTGCCTGAAGACTTTAGCCACCTTGAGAATTTACATGATTTCCGTGCTGAAAGTAAACTCCACTCCAATATTCGCAATGTTGGAAAGATGAAGCATCTACAGAGGCTAGAAGAATTCCATGTTAAGAAGGAGAGCATGGGATTTGAACTGTCAGAACTTGGGCCATTGACAGAGCTTGAAGGAGGACTGACTGTACGTGGTCTTGAACACGTGGCAACCAAGGAGGAAGCTACTGCAGCCAAACTGATGTTGAAAAGGAATCTGAAGCAGTTGGAATTACTCTGGGACAGAGACCTTGGTGGACCAACTACAGATGCTGATATTCTTGATGCTCTTCAACCACACTCTAATCTTAGAGTACTTGCAATTGTAAATCATGGTGGTACCGTTGGTCCTAGCTGGTTGTGTCTTGACATCTGGTTAACAAGTTTAGAGACTCTCACTCTAGCAGGCGTATGTTGGAGCACTCTCCCGCCTTTTGCGAAGCTACCAAATCTCAAGGGACTCAAACTGATGAGAATTTCTGGAATGCATCAGTTTGGGTCTCTATGTGGTGGCACTCCAGGGAAATGTTTTATGCGCTTGAAGACAGTTGAGTTTTATGAGATGCCAGAACTTGCTGAATGGGTTGTGGAATCTAATTGCCATTCCTTTCCAAGTCTTGAAGAAATCAGATGCAGAAATTGTCCCAACCTCCGTGTGATGCCCTTCTCGGAGGTATCTTTCACCAATTTGCGCACACTTTTTGTTTCCAGGTGCCCCAAGATGTCTCTGCCCTCCATGCCTCACACCTCCACACTGACAGATCTGAATGTTGGAATAGGTGATTCAGAAGGGTTGCATTATGATGGAAAGAAATTGATTGTTATAGGGTATGGCGGTGCTTTGGCCTCCCACAATCTGGATACAGTAGAAGATATGATTGTCGAAAGATGCGACGGTTTGTTCCCTGAAGATTTGGATGGCAGTTTTGTCTTCCGTTCAGTTAAGAATCTCACATTACATGTATCTCGTCTTACCAGCAGCAAATCATCATCGTCAAAAGTGTTAAACTGTTTCCCAGCTCTTTCTGTGTTGGTGATAGTTGGCTATGAGGAATGTGTAATGCAGTTCCCATCATCCAGCTCACTGCAGAAACTTACCTTCTCAGGCTGCCGGGGCCTGGTTCTTGTGCCTGAGGAGAAGGAGAATGGAGGAGGAATTCAGGAGGACAACTCATTGCTCCAATCATTAACAATAGTGGGATGTGGCAAACTCTTCTCTCGTTGGCCCATGGGAATGGGAGAATCAGAGACCATTTGCCCTTTCCCTGCTTCCCTGAAGAAACTTGATGTTTTCCAAGAGCCAAGCATGAAGTCAATGGCTCTGCTCTCAAACCTCACGTCTCTCACCACTCTACAGCTAAACTACTGCAGTAATTTAACAGTGGATGGATTCAATCCTCTCATCGCAGTCAACCTCATAGAGCTGCAAGTGCATAGGTGCAACACCTTAGCAGCAGATATGCTCTCAGAGGCGGCCTCTCACTCTCAGAGGGCCAAATTATTGCCTGCAGGTTACATCTCTAGATTGGAGAAACTCAATGTGGATAACAACTGTGGATTGCTTGTTGCTCCTATTTGCAACCTCCTCGCCCCGGCCCTCCACACACTTGTATTCTGGATTGATGAAACGATGGAAAGCTTGACGGAAGAGCAAGAGAAAGCGCTGCAGCTCCTCACCTCCCTCCAGAATCTAACATTTTTCAGATGCAGGGGTCTACAGTCCCTTCCTCAAGGGTTGCATCGCCTTTCTTCTCTCAAGGAGTTATGTGTCCGTGGGTGTCTAAAAATCCAATCGTTGCCCAAGGAGGGCCTCCCGCTTTCGCTGAGAAGACTAAAGATGAATTGGCGCAGCGCTGAGATAAACGAGCAAATTGAGAAAATCAAAAGAAGCAACCCAGATTTATCCGTCTCGTATTGCTAA

Protein sequences

Name	Description	Sequence
Lr1 disease resistance protein	Lr1 disease resistance protein [Triticum aestivum].	MAAALGSAATLLGKVFTMLSAAPVAAYVDSLELGHNSQQIRAKLAHTRGLLHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSLPSMPHTSTLTDLNVGIGDSEGLHYDGKKLIVIGYGGALASHNLDTVEDMIVERCDGLFPEDLDGSFVFRSVKNLTLHVSRLTSSKSSSSKVLNCFPALSVLVIVGYEECVMQFPSSSSLQKLTFSGCRGLVLVPEEKENGGGIQEDNSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLPKEGLPLSLRRLKMNWRSAEINEQIEKIKRSNPDLSVSYC

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR11017:SF28	51-862	PTHR11017:SF28	LHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLM
HMMPanther: PTHR11017	51-862	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	LHNAQAQVSDVGHNPGLQELLPALSRNADEAEDLLDELHYFQIHDRLHATNYAATQANFLRHARNALRHTATSSWAACFSCSSAQDDSDSTSGDDELRFHRVIFSRKFKSVLQDMQTHCDSVSDLLGTIPTSSMPVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDHQADRNYLEELVDNGFLMKKKEYYLDDRCKQKEFDCYVMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLM
superfamily: SSF52540	185-444	SSF52540	PVAVHRPQIGSTIIQDTLYGRRHTFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQN
HMMPfam: PF00931 IPR002182	208-498	NB-ARC,NBS NB-ARC	TFEETVNRIFSCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRFPKLAQMMETIDPLELLGLESNDFFTFFEACIFGEDNKPEHFEDELAGIAQKIADKLKGSPLAAKTVGRLLHKDLSQKHWNGVLEKHQWLKQQNNDDIMPSLKISYDCLPFDLKKCFSYCGLFPEDHWFTSSEINHFWVAVGIIDSDH
Gene3D: G3DSA:3.40.50.300	218-351	G3DSA:3.40.50.300	SCKHPVSVLPIVGPGGIGKTTFAQHLYNDARTEEHFQVRVWVCVSTDFNVLKLTREILACIPATEEGGSSSVANETTNLDHLQRSIVRRLKSKRFLIVLDDIWKCDSQDQWKTLLAPFTKGETKGSMLLVTTRF
FPrintScan: PR00364 IPR000767	225-240	DISEASERSIST Disease resistance protein	VLPIVGPGGIGKTTFA
FPrintScan: PR00364 IPR000767	306-320	DISEASERSIST Disease resistance protein	RLKSKRFLIVLDDIW
FPrintScan: PR00364 IPR000767	407-421	DISEASERSIST Disease resistance protein	LKGSPLAAKTVGRLL
superfamily: SSF52058	535-962	SSF52058,LRR	VMHDLMHELSKSVSAQECLNISGFDFRADAIPQSVRHLSINIEDRYDANFEEEMSKLREKIDIANVRTLMIFREYEEERTAKILKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKESMGFELSELGPLTELEGGLTVRGLEHVATKEEATAAKLMLKRNLKQLELLWDRDLGGPTTDADILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSLPSMPHTSTLTDLNV
Gene3D: G3DSA:3.80.10.10	618-735	G3DSA:3.80.10.10	LKDSFKEINSLRVLFIVVKSAQSFPDMFSKLIHLQYLKISSPHIDGEMRLPSTLSRFYHLKFLDLDDWRGSSDLPEDFSHLENLHDFRAESKLHSNIRNVGKMKHLQRLEEFHVKKES
Gene3D: G3DSA:3.80.10.10	797-948	G3DSA:3.80.10.10	DILDALQPHSNLRVLAIVNHGGTVGPSWLCLDIWLTSLETLTLAGVCWSTLPPFAKLPNLKGLKLMRISGMHQFGSLCGGTPGKCFMRLKTVEFYEMPELAEWVVESNCHSFPSLEEIRCRNCPNLRVMPFSEVSFTNLRTLFVSRCPKMSL
FPrintScan: PR00364 IPR000767	930-946	DISEASERSIST Disease resistance protein	VSFTNLRTLFVSRCPKM
superfamily: SSF52047	1035-1305	SSF52047,LRR	SSSKVLNCFPALSVLVIVGYEECVMQFPSSSSLQKLTFSGCRGLVLVPEEKENGGGIQEDNSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLP
Gene3D: G3DSA:3.80.10.10	1056-1080	G3DSA:3.80.10.10	ECVMQFPSSSSLQKLTFSGCRGLVL
Gene3D: G3DSA:3.80.10.10	1095-1306	G3DSA:3.80.10.10	NSLLQSLTIVGCGKLFSRWPMGMGESETICPFPASLKKLDVFQEPSMKSMALLSNLTSLTTLQLNYCSNLTVDGFNPLIAVNLIELQVHRCNTLAADMLSEAASHSQRAKLLPAGYISRLEKLNVDNNCGLLVAPICNLLAPALHTLVFWIDETMESLTEEQEKALQLLTSLQNLTFFRCRGLQSLPQGLHRLSSLKELCVRGCLKIQSLPK

Diseases

Disease	Pathogen	Avirulence gene
Wheat leaf rust	Puccinia triticina

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Analyses

Blast

Blast matches against Reference R-Genes. Show