PRGDB00061470 (Lr34)
| Lr34 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 301130794 (HM775493) |
| Gene Class | Other |
| Domain Type | NBS |
| Gene Species | Triticum aestivum |
DNA Sequence
CAAATCCCAAAGTGGTGGACTTGGCTCTACTATCTCACTCCTACATCTTGGGCACTCAATGCCCTCTTGACATCACAATACGGAAACATAGAAAAAGAGGTGAAAGCATTTGGAGAAACTAAATCAGTTTCAATCTTCTTGAATGACTATTTTGGGTTTCATCAAGACAAGTTGAGCATAGTAGCAACTGTCCTCGTTGCCTTTCCTTTTGTGTTGATAATCTTGTTTTCGTTGTCCATTGAGAAACTTAATTTCCAGAAGAGGTAAGCTTTCATTGAGATACCCTATGTATTTATCCAAGTGGTACTGTATACGTTAATTGTCTATCCGTCAACTGGTTATTATTGGACAGCACACAAATTCCTATGGTTCTTCTACACTACATTTTGTTCAATTCTCTCCTATGTTTATGTTGGGTTGCTTCTTGTTTCAATAACCCCCAATGTTCAAGTAGCTACCATACTGGCTTCATTTTTCAACACCATGCAAACACTATTCTCAGGATTTATTTTACCTGCACCTAAACAACGAGCAGGACATGCTCAGTGTTTTTGGTGCAATGTATTTGGGTTTCACAACCATAGGCGCTTATAATGATCAGACAATCATACCATTCAGTACGACTGAGCGTATTGTAATGTATCGTGAGAAATTTGCAGGAATGTATTCATCTTGGTCATATTCATTCGCACAGAGAAGCTGAAGATCTAGTGGAGCAGCTAAGTATCCCATTACCAAATTCAGAAAATCTACGCTTCTCCCATAGTTTTGCACAGAATGGCTGGATTCAACTTAAAGCTTGCTTGTGGAAACAAAACATAACTTACTGGAGAAGTCCTCAGTATAACTTGAGGCGCATTATGATGACTGTCATATCTGCCCTGATCTACGGAGTATTGTTCTGGAAGCATGCAAAAGTATTAAAATTTCTGGAGTCCCAAAAATAAAGAGTAACTGCAATCCAGCTACCTGGATGATGGATGTAACATCGACATCAATGGAGGTTCAACACAACATGGACTTTGCAATTTTGTATGAAGAGTCGTCACTGCATAGCTCATATTAATGAAAACCGGTGGGAAAACAATCTACAATGGACCAATAGGAGAGCGCTCCTGCAAAGTGATTGAGTACTTTGAGAAATTTGTTGCTGAAGTCCTTGAAACTGTTGAACTAGATCAAATAAAAGATGTCTTAGTGGGGTCACCACAGAAAAATGGATTGTCCATGGAGCAGAGAAAGAGGCTAACGATTGCAGTCGAGCTTGTTTCAAACCCATCAATCATACTAATGGATGAACCAACAACAGGTTTAGATACAAGGTCAGCAGCCATTGTTATTCGTGCAGTCAAAAATATTTGTGAAACAGGAAGGACGGTAGTCTGTACAATCCATCAGCCGAGCACTGAAATTTTTGAGGCATTTGATGAGGAAATGCTGAAACAAGGCTATCCAACAAGAAGACTTCGACTGCTTAATAACATAACTGGAGCTTTACGTCCCGGTGTTCTTTCTGCACTAATGGGTGTTAGTGGAGCTGGGAAGACAACTCTACTAGATGTATTAGCAGGAAGGAAAACAGGAGGTTATATTGAAGGGGACATAAGAATAGGTGGATATCCCAAGGTGCAGGAAACATTTGTCAGAATCTTGGGTTACTGCGAACAAGTCGACATACATTCCCCACAGCTTACAGTTGAAGAGTCTGTAACTTATTCTGCGTGGCTTCGTCTGCCTTCTCATGTCGACAAACAAACAAGATCTCAAAGATGACTATACCAACTATGCATCTTCCAATTACATTCCACAATCTGAACTACTACATTGATACCCCACCGCTACAGAAGAATATCATGGAAGCAGGCCTACAAAGAGCTTATGTCAACAGCAGGAAAAAGATTCCACTATTCAAAATGAATCTGATGATCAATCAAATATTTCCAAAGGAAAGTATTCAAAACATAACAATTGGGAACCAAATCCTGGTTAATCACGGCCTATATTACAGTTGGCATTTTTATTGGATATCCTTTGGAGCCTTGCTTGGATCTATTCTTTTATTTTATATCGCTTTTGGATTGGCACTAGATTACAGAACACCCTCCATGCCAGAATGGCTAAACTGGGGATTTTGGATATCTCCAATGGCATATGCAGAAATCAGCATAGTTATTAACGAGTTCTTGGCACCAAGATGGCAGAAGGTTCTTCTGCCAGTTTCTGATACTTTGTCTTCTCCATCATTCAGTCACCTCGCAGTATCGATTTATTGCTTCATACTTCCAAACACCTATTGTGTCTTTCTTCTACCTTTTTCTTGCTCTAACAGTATTCCTTACATTCGGAGGCTTCATTCTTCCCAAGACTTGCCATTATTGCACTCGTAACAATGTCTGTATTCCTTCGAACTCGCATGACAATAAGTTTCACTCATGCAAATTACTATATGGGAGCATTATTTTTTTCCATCTTCATGATTATGCTAAATGGCATACCAGAGATGAGCATGCAGATTGGGAGACTCCCAAGTTTTTACAAACAAAAGAGCTACTATTTCTATTCATCATGGGCATATGCAATACCAGCTTCAGTCCTAAAGGTCCCTGTTTCCATACTGGATTCGCTTGTATGGATATCTATCACATATTATGGTATTGGTTATACACCTACTGTTTCAAGATCTTGTCCAGGAAGGACCAAGAACAGTACTGGTTGGGTCCACATGAATCATACAGATATATCTCACCTCATGAATTATCAAGCATGTTCAAGGAGAATCACAGGGGGAGAAAACTACATGAACAAAGTGTACCTCCCAAAAGCCAGTTCGGCAAGGAAGCTTTAGCATTCAATAAGTATTCGCTACGAAAACTGGAAATGTTCAAAGCCTGTGGAGCAAGGGAAGCACTCCTAATGAAAAGGAATATGTTTGTTTATGTCTTCAAAACAGGCCAGCCGAGATGATTGTGGGACCCGCAAAAGCATACTTTATGGATGAAATATCAAATGGTCTGGATAGCTCTACCACTTTTCAAATAATCAATTGTTTCCAGCAACTGACAAACATCAGCGAGTACACGATGGTTATTTCACTTCTTCAACCAACACCTGAGGTATTTGATCTTTTCGATGACCTCATACTAATGGCAGAAGGGAAGATTATCTACCATGGCCCTCGAAATGAAGCCCTCAATTTTTTTGAGGAGTGTGGGTTCAAATGCCCAGAAAGAAAAGCGGCAGCTGACTTTCTCCAAGAGATCATGGGGCTAGAGACATGCGCAGACACGATGGTTGGGGATGCAATGAGAAGAGGAATATCAGGGGGGCAGAAGAAAAGATTAACCACAGGTAGTAGCAGTTGAAGCTTCAGAGCGAAGCCTACAGACAGATTATATTTTGAAGAAATACTCAAGGAGGTGAACACAAGGGAGAGTGTGGCTGGGATCATACCTGATGCGGACATCGATCTATACATGAAGGTAACAGGGGATATCTCTTATAATTGTTATGAACTTCATGAATTTGTACCTGAGAAAACAGCTGTGTATATCAACCAACATGATCTGCACATAGCTGAGATGACTGTGAGGGAAACTTTAGACTTCTCAGCCCAGTGCCAAGGTGTTGGAAGAAGACCAAATTGACTCTTCTACTGGGACCTCCTGGATGTGGCAAAAGCACTCTGTTGCGAGCTCTTGCCGGGAAACTAGATAAATCTCTAAAGGGCCTCGTGAAGTTGCTAGGCTTCGAAACGGAAAGAGCAAAAACCAACGTTCTAGAAGATGTCAGTGGAATCATCAAACCCTGCAGGGTTGATGTCAAGTTGCCAGCAATAGAGGTGAGGTATAATAATCTGTTTGTGGAAGCAGAGTGCAGAGTTACTAAAGGAAATCACCTGCCGTCTCTATGGAATAGTACCAAAGGTGCCTTCTCGATGGAGGGCCTCGCGAGAGAGACCAACCCATCATCCCACCATCAAGATTTCGCCTCCTGCGCGAGTGACGAGCGCCCGGATGAGCCCGAGTTGGAATTGGCATCGCGACGGCGCCAGAATGGTGCTGGAAACAACGAGCATGTGAGTGAGAACATGCTGCTTGACAGCAGCAAGTTTGGAGCTCTCAAGAGGCGTGAGTTCTTCAACAACCTGCTAAAGAACCTCGAAGACGACCACCCCCGCTTTCTGCGCAGACAAAAGGAAAGAATTGACAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| LR34 | LR34 [Triticum aestivum]. | MEGLARETNPSSHHQDFASCASDERPDEPELELASRRRQNGAGNNEHVSENMLLDSSKFGALKRREFFNNLLKNLEDDHPRFLRRQKERIDRVDVKLPAIEVRYNNLFVEAECRVTKGNHLPSLWNSTKGAFSGLVKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTKSLCQQQEKDSTIQNESDDQSNISKAKMTIPTMHLPITFHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGERSCKVIEYFEKISGVPKIKSNCNPATWMMDVTSTSMEVQHNMDFAILYEESSLHREAEDLVEQLSIPLPNSENLRFSHSFAQNGWIQLKACLWKQNITYWRSPQYNLRRIMMTVISALIYGVLFWKHAKVLNNEQDMLSVFGAMYLGFTTIGAYNDQTIIPFSTTERIVMYREKFAGMYSSWSYSFAQAFIEIPYVFIQVVLYTLIVYPSTGYYWTAHKFLWFFYTTFCSILSYVYVGLLLVSITPNVQVATILASFFNTMQTLFSGFILPAPQIPKWWTWLYYLTPTSWALNALLTSQYGNIEKEVKAFGETKSVSIFLNDYFGFHQDKLSIVATVLVAFPFVLIILFSLSIEKLNFQKR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 135-412 | SSF52540 | LVKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAA |
| ProfileScan: PS50893 IPR003439
|
136-408 | ABC_TRANSPORTER_2 ABC transporter-like
|
VKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPE |
| Gene3D: G3DSA:3.40.50.300 | 140-397 | G3DSA:3.40.50.300 | GFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALN |
| HMMPanther: PTHR19241 | 149-766 | PTHR19241,ATP-BINDING CASSETTE TRANSPORTER | NVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTK |
| HMMPanther: PTHR19241:SF96 | 149-766 | PTHR19241:SF96 | NVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTK |
| HMMSmart: SM00382 IPR003593
|
160-393 | AAA,NBS AAA+ ATPase domain
|
PCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRN |
| HMMPfam: PF00005 IPR003439
|
175-332 | ABC_tran ABC transporter-like
|
STLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDE |
| HMMPfam: PF01061 IPR013525
|
486-696 | ABC2_membrane ABC-2 type transporter
|
FKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEF |
| HMMPfam: PF08370 IPR013581
|
701-758 | PDR_assoc Plant PDR ABC transporter associated
|
WQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEE |
| ProfileScan: PS50893 IPR003439
|
802-1055 | ABC_TRANSPORTER_2 ABC transporter-like
|
ITFHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGERSCKVIEYFEKISG |
| Gene3D: G3DSA:3.40.50.300 | 804-1040 | G3DSA:3.40.50.300 | FHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIG |
| superfamily: SSF52540 | 818-1041 | SSF52540 | LKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGE |
| HMMSmart: SM00382 IPR003593
|
839-1031 | AAA,NBS AAA+ ATPase domain
|
PGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGG |
| HMMPfam: PF00005 IPR003439
|
854-982 | ABC_tran ABC transporter-like
|
TTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTT |
| HMMPfam: PF01061 IPR013525
|
1128-1341 | ABC2_membrane ABC-2 type transporter
|
QLKACLWKQNITYWRSPQYNLRRIMMTVISALIYGVLFWKHAKVLNNEQDMLSVFGAMYLGFTTIGAYNDQTIIPFSTTERIVMYREKFAGMYSSWSYSFAQAFIEIPYVFIQVVLYTLIVYPSTGYYWTAHKFLWFFYTTFCSILSYVYVGLLLVSITPNVQVATILASFFNTMQTLFSGFILPAPQIPKWWTWLYYLTPTSWALNALLTSQY |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Wheat leaf rust | Puccinia triticina |
List of References
Simon G Krattinger, Evans S Lagudah, Thomas Wicker, Joanna M Risk, Anthony R Ashton, Liselotte L Selter, Takashi Matsumoto, Beat Keller
Lr34 multi-pathogen resistance ABC transporter: molecular analysis of homoeologous and orthologous genes in hexaploid wheat and other grass species.
Plant J.: 2011, 65(3);392-403
PubMed:21265893
WorldCat.org
DOI
(I p)
List of Contributions
There has not been any contribution yet.
