PRGDB00061470 (Lr34)
Lr34 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 301130794 (HM775493) |
Gene Class | Other |
Domain Type | NBS |
Gene Species | Triticum aestivum |
DNA Sequence
CAAATCCCAAAGTGGTGGACTTGGCTCTACTATCTCACTCCTACATCTTGGGCACTCAATGCCCTCTTGACATCACAATACGGAAACATAGAAAAAGAGGTGAAAGCATTTGGAGAAACTAAATCAGTTTCAATCTTCTTGAATGACTATTTTGGGTTTCATCAAGACAAGTTGAGCATAGTAGCAACTGTCCTCGTTGCCTTTCCTTTTGTGTTGATAATCTTGTTTTCGTTGTCCATTGAGAAACTTAATTTCCAGAAGAGGTAAGCTTTCATTGAGATACCCTATGTATTTATCCAAGTGGTACTGTATACGTTAATTGTCTATCCGTCAACTGGTTATTATTGGACAGCACACAAATTCCTATGGTTCTTCTACACTACATTTTGTTCAATTCTCTCCTATGTTTATGTTGGGTTGCTTCTTGTTTCAATAACCCCCAATGTTCAAGTAGCTACCATACTGGCTTCATTTTTCAACACCATGCAAACACTATTCTCAGGATTTATTTTACCTGCACCTAAACAACGAGCAGGACATGCTCAGTGTTTTTGGTGCAATGTATTTGGGTTTCACAACCATAGGCGCTTATAATGATCAGACAATCATACCATTCAGTACGACTGAGCGTATTGTAATGTATCGTGAGAAATTTGCAGGAATGTATTCATCTTGGTCATATTCATTCGCACAGAGAAGCTGAAGATCTAGTGGAGCAGCTAAGTATCCCATTACCAAATTCAGAAAATCTACGCTTCTCCCATAGTTTTGCACAGAATGGCTGGATTCAACTTAAAGCTTGCTTGTGGAAACAAAACATAACTTACTGGAGAAGTCCTCAGTATAACTTGAGGCGCATTATGATGACTGTCATATCTGCCCTGATCTACGGAGTATTGTTCTGGAAGCATGCAAAAGTATTAAAATTTCTGGAGTCCCAAAAATAAAGAGTAACTGCAATCCAGCTACCTGGATGATGGATGTAACATCGACATCAATGGAGGTTCAACACAACATGGACTTTGCAATTTTGTATGAAGAGTCGTCACTGCATAGCTCATATTAATGAAAACCGGTGGGAAAACAATCTACAATGGACCAATAGGAGAGCGCTCCTGCAAAGTGATTGAGTACTTTGAGAAATTTGTTGCTGAAGTCCTTGAAACTGTTGAACTAGATCAAATAAAAGATGTCTTAGTGGGGTCACCACAGAAAAATGGATTGTCCATGGAGCAGAGAAAGAGGCTAACGATTGCAGTCGAGCTTGTTTCAAACCCATCAATCATACTAATGGATGAACCAACAACAGGTTTAGATACAAGGTCAGCAGCCATTGTTATTCGTGCAGTCAAAAATATTTGTGAAACAGGAAGGACGGTAGTCTGTACAATCCATCAGCCGAGCACTGAAATTTTTGAGGCATTTGATGAGGAAATGCTGAAACAAGGCTATCCAACAAGAAGACTTCGACTGCTTAATAACATAACTGGAGCTTTACGTCCCGGTGTTCTTTCTGCACTAATGGGTGTTAGTGGAGCTGGGAAGACAACTCTACTAGATGTATTAGCAGGAAGGAAAACAGGAGGTTATATTGAAGGGGACATAAGAATAGGTGGATATCCCAAGGTGCAGGAAACATTTGTCAGAATCTTGGGTTACTGCGAACAAGTCGACATACATTCCCCACAGCTTACAGTTGAAGAGTCTGTAACTTATTCTGCGTGGCTTCGTCTGCCTTCTCATGTCGACAAACAAACAAGATCTCAAAGATGACTATACCAACTATGCATCTTCCAATTACATTCCACAATCTGAACTACTACATTGATACCCCACCGCTACAGAAGAATATCATGGAAGCAGGCCTACAAAGAGCTTATGTCAACAGCAGGAAAAAGATTCCACTATTCAAAATGAATCTGATGATCAATCAAATATTTCCAAAGGAAAGTATTCAAAACATAACAATTGGGAACCAAATCCTGGTTAATCACGGCCTATATTACAGTTGGCATTTTTATTGGATATCCTTTGGAGCCTTGCTTGGATCTATTCTTTTATTTTATATCGCTTTTGGATTGGCACTAGATTACAGAACACCCTCCATGCCAGAATGGCTAAACTGGGGATTTTGGATATCTCCAATGGCATATGCAGAAATCAGCATAGTTATTAACGAGTTCTTGGCACCAAGATGGCAGAAGGTTCTTCTGCCAGTTTCTGATACTTTGTCTTCTCCATCATTCAGTCACCTCGCAGTATCGATTTATTGCTTCATACTTCCAAACACCTATTGTGTCTTTCTTCTACCTTTTTCTTGCTCTAACAGTATTCCTTACATTCGGAGGCTTCATTCTTCCCAAGACTTGCCATTATTGCACTCGTAACAATGTCTGTATTCCTTCGAACTCGCATGACAATAAGTTTCACTCATGCAAATTACTATATGGGAGCATTATTTTTTTCCATCTTCATGATTATGCTAAATGGCATACCAGAGATGAGCATGCAGATTGGGAGACTCCCAAGTTTTTACAAACAAAAGAGCTACTATTTCTATTCATCATGGGCATATGCAATACCAGCTTCAGTCCTAAAGGTCCCTGTTTCCATACTGGATTCGCTTGTATGGATATCTATCACATATTATGGTATTGGTTATACACCTACTGTTTCAAGATCTTGTCCAGGAAGGACCAAGAACAGTACTGGTTGGGTCCACATGAATCATACAGATATATCTCACCTCATGAATTATCAAGCATGTTCAAGGAGAATCACAGGGGGAGAAAACTACATGAACAAAGTGTACCTCCCAAAAGCCAGTTCGGCAAGGAAGCTTTAGCATTCAATAAGTATTCGCTACGAAAACTGGAAATGTTCAAAGCCTGTGGAGCAAGGGAAGCACTCCTAATGAAAAGGAATATGTTTGTTTATGTCTTCAAAACAGGCCAGCCGAGATGATTGTGGGACCCGCAAAAGCATACTTTATGGATGAAATATCAAATGGTCTGGATAGCTCTACCACTTTTCAAATAATCAATTGTTTCCAGCAACTGACAAACATCAGCGAGTACACGATGGTTATTTCACTTCTTCAACCAACACCTGAGGTATTTGATCTTTTCGATGACCTCATACTAATGGCAGAAGGGAAGATTATCTACCATGGCCCTCGAAATGAAGCCCTCAATTTTTTTGAGGAGTGTGGGTTCAAATGCCCAGAAAGAAAAGCGGCAGCTGACTTTCTCCAAGAGATCATGGGGCTAGAGACATGCGCAGACACGATGGTTGGGGATGCAATGAGAAGAGGAATATCAGGGGGGCAGAAGAAAAGATTAACCACAGGTAGTAGCAGTTGAAGCTTCAGAGCGAAGCCTACAGACAGATTATATTTTGAAGAAATACTCAAGGAGGTGAACACAAGGGAGAGTGTGGCTGGGATCATACCTGATGCGGACATCGATCTATACATGAAGGTAACAGGGGATATCTCTTATAATTGTTATGAACTTCATGAATTTGTACCTGAGAAAACAGCTGTGTATATCAACCAACATGATCTGCACATAGCTGAGATGACTGTGAGGGAAACTTTAGACTTCTCAGCCCAGTGCCAAGGTGTTGGAAGAAGACCAAATTGACTCTTCTACTGGGACCTCCTGGATGTGGCAAAAGCACTCTGTTGCGAGCTCTTGCCGGGAAACTAGATAAATCTCTAAAGGGCCTCGTGAAGTTGCTAGGCTTCGAAACGGAAAGAGCAAAAACCAACGTTCTAGAAGATGTCAGTGGAATCATCAAACCCTGCAGGGTTGATGTCAAGTTGCCAGCAATAGAGGTGAGGTATAATAATCTGTTTGTGGAAGCAGAGTGCAGAGTTACTAAAGGAAATCACCTGCCGTCTCTATGGAATAGTACCAAAGGTGCCTTCTCGATGGAGGGCCTCGCGAGAGAGACCAACCCATCATCCCACCATCAAGATTTCGCCTCCTGCGCGAGTGACGAGCGCCCGGATGAGCCCGAGTTGGAATTGGCATCGCGACGGCGCCAGAATGGTGCTGGAAACAACGAGCATGTGAGTGAGAACATGCTGCTTGACAGCAGCAAGTTTGGAGCTCTCAAGAGGCGTGAGTTCTTCAACAACCTGCTAAAGAACCTCGAAGACGACCACCCCCGCTTTCTGCGCAGACAAAAGGAAAGAATTGACAG
Protein sequences
Name | Description | Sequence |
---|---|---|
LR34 | LR34 [Triticum aestivum]. | MEGLARETNPSSHHQDFASCASDERPDEPELELASRRRQNGAGNNEHVSENMLLDSSKFGALKRREFFNNLLKNLEDDHPRFLRRQKERIDRVDVKLPAIEVRYNNLFVEAECRVTKGNHLPSLWNSTKGAFSGLVKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTKSLCQQQEKDSTIQNESDDQSNISKAKMTIPTMHLPITFHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGERSCKVIEYFEKISGVPKIKSNCNPATWMMDVTSTSMEVQHNMDFAILYEESSLHREAEDLVEQLSIPLPNSENLRFSHSFAQNGWIQLKACLWKQNITYWRSPQYNLRRIMMTVISALIYGVLFWKHAKVLNNEQDMLSVFGAMYLGFTTIGAYNDQTIIPFSTTERIVMYREKFAGMYSSWSYSFAQAFIEIPYVFIQVVLYTLIVYPSTGYYWTAHKFLWFFYTTFCSILSYVYVGLLLVSITPNVQVATILASFFNTMQTLFSGFILPAPQIPKWWTWLYYLTPTSWALNALLTSQYGNIEKEVKAFGETKSVSIFLNDYFGFHQDKLSIVATVLVAFPFVLIILFSLSIEKLNFQKR |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52540 | 135-412 | SSF52540 | LVKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAA |
ProfileScan: PS50893 IPR003439
|
136-408 | ABC_TRANSPORTER_2 ABC transporter-like
|
VKLLGFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPE |
Gene3D: G3DSA:3.40.50.300 | 140-397 | G3DSA:3.40.50.300 | GFETERAKTNVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALN |
HMMPanther: PTHR19241 | 149-766 | PTHR19241,ATP-BINDING CASSETTE TRANSPORTER | NVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTK |
HMMPanther: PTHR19241:SF96 | 149-766 | PTHR19241:SF96 | NVLEDVSGIIKPCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFKCPERKAAADFLQEILSRKDQEQYWLGPHESYRYISPHELSSMFKENHRGRKLHEQSVPPKSQFGKEALAFNKYSLRKLEMFKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEFLAPRWQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEEYHGSRPTK |
HMMSmart: SM00382 IPR003593
|
160-393 | AAA,NBS AAA+ ATPase domain
|
PCRLTLLLGPPGCGKSTLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDEISNGLDSSTTFQIINCFQQLTNISEYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRN |
HMMPfam: PF00005 IPR003439
|
175-332 | ABC_tran ABC transporter-like
|
STLLRALAGKLDKSLKVTGDISYNCYELHEFVPEKTAVYINQHDLHIAEMTVRETLDFSAQCQGVGRRPKILKEVNTRESVAGIIPDADIDLYMKVVAVEASERSLQTDYILKIMGLETCADTMVGDAMRRGISGGQKKRLTTAEMIVGPAKAYFMDE |
HMMPfam: PF01061 IPR013525
|
486-696 | ABC2_membrane ABC-2 type transporter
|
FKACGAREALLMKRNMFVYVFKTGQLAIIALVTMSVFLRTRMTISFTHANYYMGALFFSIFMIMLNGIPEMSMQIGRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWISITYYGIGYTPTVSRFFCQFLILCLLHHSVTSQYRFIASYFQTPIVSFFYLFLALTVFLTFGGFILPKTSMPEWLNWGFWISPMAYAEISIVINEF |
HMMPfam: PF08370 IPR013581
|
701-758 | PDR_assoc Plant PDR ABC transporter associated
|
WQKESIQNITIGNQILVNHGLYYSWHFYWISFGALLGSILLFYIAFGLALDYRTPTEE |
ProfileScan: PS50893 IPR003439
|
802-1055 | ABC_TRANSPORTER_2 ABC transporter-like
|
ITFHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGERSCKVIEYFEKISG |
Gene3D: G3DSA:3.40.50.300 | 804-1040 | G3DSA:3.40.50.300 | FHNLNYYIDTPPEMLKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIG |
superfamily: SSF52540 | 818-1041 | SSF52540 | LKQGYPTRRLRLLNNITGALRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGGKTIYNGPIGE |
HMMSmart: SM00382 IPR003593
|
839-1031 | AAA,NBS AAA+ ATPase domain
|
PGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTTGLDTRSAAIVIRAVKNICETGRTVVCTIHQPSTEIFEAFDELILMKTGG |
HMMPfam: PF00005 IPR003439
|
854-982 | ABC_tran ABC transporter-like
|
TTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQVDIHSPQLTVEESVTYSAWLRLPSHVDKQTRSKFVAEVLETVELDQIKDVLVGSPQKNGLSMEQRKRLTIAVELVSNPSIILMDEPTT |
HMMPfam: PF01061 IPR013525
|
1128-1341 | ABC2_membrane ABC-2 type transporter
|
QLKACLWKQNITYWRSPQYNLRRIMMTVISALIYGVLFWKHAKVLNNEQDMLSVFGAMYLGFTTIGAYNDQTIIPFSTTERIVMYREKFAGMYSSWSYSFAQAFIEIPYVFIQVVLYTLIVYPSTGYYWTAHKFLWFFYTTFCSILSYVYVGLLLVSITPNVQVATILASFFNTMQTLFSGFILPAPQIPKWWTWLYYLTPTSWALNALLTSQY |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Wheat leaf rust | Puccinia triticina |
List of References
Simon G Krattinger, Evans S Lagudah, Thomas Wicker, Joanna M Risk, Anthony R Ashton, Liselotte L Selter, Takashi Matsumoto, Beat Keller
Lr34 multi-pathogen resistance ABC transporter: molecular analysis of homoeologous and orthologous genes in hexaploid wheat and other grass species.
Plant J.: 2011, 65(3);392-403
PubMed:21265893
WorldCat.org
DOI
(I p)
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