PRGDB00061480 (disease resistance protein)
| disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 12323020 (AC058785) |
| Gene Class | TNL |
| Domain Type | NBS, TIR, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGCTTCTTCTTCTTCCTCACCTCGCAACTGGAGATACAATGTCTTCACGAGCTTCCATGGACCAGACGTCCGTATTAAATTTCTCAGTCATTTACGTCAACAGTTTGTCTACAATGGAATTACAATGTTCGATGACAACGGGATCGAAAGAAGCCAAATTATCGCTCCAGCTCTCAAAAAAGCCATTGGAGAATCAAGGGTCGCGATTGTATTGCTCTCGAAGAACTATGCTTCTTCCAGTTGGTGTTTGGATGAGCTATTGGAGATTTTAAAGTGCAAAGAATATATAGGACAAATAGTGATGACTGTCTTCTACGAAGTTGATCCTTCTCACGTGCGCAAACAAACCGGAGATTTTGGGATTGCTTTCAAAGAAACTTGTGCTCATAAAACAGAGGAGGAGAGGAGCAAATGGAGCCAAGCTTTGACCTATGTGGGCAACATAGCCGGAGAAGACTTCATACACTGGAAAGATGAAGCAAAAATGATAGAGAAGATAGCAAGAGATGTTTCGACTAAAATAAATGTCACACCGTGTCGGGATTTTGATGACATGGTTGGACTAGAAAGACATTTGAAGGAAATGGTGTCTTTGCTAGATTTAGACAAAGAAGGAGTTAAGATGGTTGGAATCTCTGGTCCTGCAGGCATTGGTAAGAGTACCATTGCCAAAGCTTTACATAGTCGACACTCTAGTACGTTTCAACATAATTGTTTTGTGGACAATCTTTGGGAAAACTATAAGATTTGTACTGGTGAGCATGGTGTGAAGTTGCGCTTACATGAGCAATTTGTTTCAAAAATTTTGAAACAAAATGGTTTGGAACTAACTCATTTAAGTGTGATAAAAGATAGGCTACAAGACAAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTTTAGCTCAACTTGAGACTTTGGCTGATATGACGTGGTTTGGTCCTGGAAGTAGGGTCATAGTAACGACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCGGTGATATATACCAAGTTGGATATCCATCAGAAAGCGAAGCACTAACGATCTTCTGTCTATCTGCTTTTAAACAAGCCTCTCCACCTGATGGGTTTATGGATCTTGCGGATGAAGTTGTAAGAATTTGTGATAAGCTTCCATTGGCTCTGTGTGTTTTAGGGTCGTCATTGCTGCGAAAGAGCCAGACTGACTGGGAGGATGAACTGCCAAGGTTGAGAAACTGTCTTGACGGAATTGAGAGTGTATTGAAAGTGGGCTTTGAGAGTTTAAATGAGAAAGACCAAGCTCTATTTCTCTACATTACAGTCTTCTTCAATTATGAATGTGCTGATCATGTGACGTTGATGCTAGCGAAATCTAACTTGAATGTTAGACTTGGGTTGAAAAACCTAGCTAATAGGTATCTCATACATATAGATCACGACCAAAAAAAAAGAGTGGTAGTGCATCGTTTGCTACGAGTAATGGCTATACAAGTTTGTACCAAACAAAAGCCTTGGAAAAGCCAGATTCTAGTAGATGCCGAAAAGATAGCTTATGTTCTTGAAGAAGCAACGGGTAATCGATCTATTAAAGGTGTATCATTTGACACAGCGGAGATCGACGAATTAATGATAAGCCCAAAGGCTTTTGAAAAAATGTGCAATCTTTTGTTCCTGAAAGTCTACGATGCGGGGTGGCATACCGGAAAAAGAAAATTGGACATTCCAGAGGATATTAAGTTTCCACGTACCATACGGTTATTTCATTGGGATGCCTACTCAGGAAAGAGGCTTCCTAGTAGCTTTTTTGCAGAAAATCTTGTTGAAGTCAATATGCAAGATAGCGAGCTCCAGAAGCTATGGGAAGGAACTCAGTGCCTTGCCAATCTCAAGAAGATAGATCTTTCAAGGTCATCTTGTTTGACGGAACTTCCAGATCTTTCAAATGCTACAAATCTGGAGGACTTGTATGTGGGTTCTTGCACTGCTTTGGTAGAGCTTCCATCTTCGATTGGGAATCTTCATAAACTAGCTCATATAATGATGTATTCTTGCGAAAGTCTAGAAGTCATTCCATCTCTCATCAACTTGACATCTCTTACCTTCCTCAACATGAATAAATGCTCAAGATTGAGAAGATTCCCAGATATCCCCACCAGCATAGAGGACGTCCAAGTAACAGGTACAACTCTAGAGGAATTGCCTGCATCACTTACGCATTGCTCTGGTCTTCAGACTATTAAGATAAGTGGAAGTGTAAATCTCAAGATCTTCTACACAGAGCTCCCCGTGAGTGTAAGCCATATAAATATAAGCAACAGTGGTATTGAGTGGATTACAGAAGATTGCATCAAAGGTCTTCATAATCTACACGACCTTTGTCTATCAGGCTGCAAAAGACTCGTGTCACTGCCAGAGCTTCCTCGTTCGCTGAAAATTCTACAAGCAGACGATTGTGATTCACTAGAGAGTTTAAATGGCCATTTAAACACTCCAAATGCAGAGCTATATTTCGCTAACTGCTTCAAATTGGATGCAGAAGCACGACGAGCGATAATTCAGCAATCGTTTGTTAGCGGGTGGGCTCTCTTACCAGGATTAGAAGTACCTCCAGAGTTCGGCCACCGAGCCAGAGGAAATTCCTTAATAATTCCTTATTCTGCTTCCAACAGATTTAAGGTTTGTGTCGTGATGTCACTTAACCATCATCAACCCTTCGAATTAGTTCCTAGAAACCTATTATATCGTTGGACAGTCATAGGCGACTCAGTGAGCTCTGATGAAAAGACGTTTCACCTTTCACATATGTTCAACGCCGACTCAGTGAACTCCAAGTTACAAAAGCCACATCTGTTCATATTTCACTCTTGCTTGCCATTCATATTTCACTCGTGCTTGCCATTCATATTTGACATTAGCAATATAATGCTCGAATTCAGCAGCGAATACAAAGATTTCGACATCCTTGAATGTGGTGTTCAGATCTTGACGGATGAAACAGATGAAAGAAACATTTGGGGTTCTCTAGTATTCTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein | disease resistance protein [Arabidopsis thaliana]. | MASSSSSPRNWRYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKINVTPCRDFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLDGIESVLKVGFESLNEKDQALFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMAIQVCTKQKPWKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELYFANCFKLDAEARRAIIQQSFVSGWALLPGLEVPPEFGHRARGNSLIIPYSASNRFKVCVVMSLNHHQPFELVPRNLLYRWTVIGDSVSSDEKTFHLSHMFNADSVNSKLQKPHLFIFHSCLPFIFHSCLPFIFDISNIMLEFSSEYKDFDILECGVQILTDETDERNIWGSLVF |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
1-152 | TIR Toll-Interleukin receptor
|
MASSSSSPRNWRYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGE |
| Gene3D: G3DSA:3.40.50.10140 | 9-144 | G3DSA:3.40.50.10140 | RNWRYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALT |
| ProfileScan: PS50104 IPR000157
|
11-149 | TIR Toll-Interleukin receptor
|
WRYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNI |
| HMMSmart: SM00255 IPR000157
|
12-149 | TIR Toll-Interleukin receptor
|
RYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNI |
| HMMPfam: PF01582 IPR000157
|
15-143 | TIR Toll-Interleukin receptor
|
VFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQAL |
| HMMPanther: PTHR11017 | 35-1001 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | QFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKINVTPCRDFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLDGIESVLKVGFESLNEKDQALFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMAIQVCTKQKPWKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELYFANCFKLDAEARRAIIQQSFVSGWALLPGLEVPPEFGHRARGNSLIIPYSASNRFKVCVVMSLNHHQPFELVPRNLLYRWTVIGDSVSSDEKTFHLSHMFNADSVNSKLQKPHLFIFHSCLPFIFHSCLPFIFDISNIMLEFSSEYKDFDILECGVQILTDETDERNI |
| HMMPanther: PTHR11017:SF20 | 35-1001 | PTHR11017:SF20,SUBFAMILY NOT NAMED | QFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKINVTPCRDFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLDGIESVLKVGFESLNEKDQALFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMAIQVCTKQKPWKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELYFANCFKLDAEARRAIIQQSFVSGWALLPGLEVPPEFGHRARGNSLIIPYSASNRFKVCVVMSLNHHQPFELVPRNLLYRWTVIGDSVSSDEKTFHLSHMFNADSVNSKLQKPHLFIFHSCLPFIFHSCLPFIFDISNIMLEFSSEYKDFDILECGVQILTDETDERNI |
| superfamily: SSF52540 | 66-413 | SSF52540 | SRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKINVTPCRDFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLDG |
| Gene3D: G3DSA:3.40.50.300 | 182-218 | G3DSA:3.40.50.300 | DFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGI |
| HMMPfam: PF00931 IPR002182
|
190-443 | NB-ARC,NBS NB-ARC
|
ERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLDGIESVLKVGFESLNEKDQALFLYITVFFNYE |
| HMMSmart: SM00382 IPR003593
|
206-381 | AAA,NBS ATPase, AAA+ type, core
|
GVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMTWFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKL |
| FPrintScan: PR00364 IPR000767
|
209-224 | DISEASERSIST Disease resistance protein
|
MVGISGPAGIGKSTIA |
| Gene3D: G3DSA:3.40.50.300 | 219-257 | G3DSA:3.40.50.300 | GKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGV |
| FPrintScan: PR00364 IPR000767
|
286-300 | DISEASERSIST Disease resistance protein
|
RLQDKKVLIILDDVE |
| FPrintScan: PR00364 IPR000767
|
378-392 | DISEASERSIST Disease resistance protein
|
CDKLPLALCVLGSSL |
| superfamily: SSF46785 | 412-518 | SSF46785 | DGIESVLKVGFESLNEKDQALFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMAIQVCTKQKPWKSQILVDAEKIAYVLE |
| superfamily: SSF52058 | 513-840 | SSF52058,LRR | IAYVLEEATGNRSIKGVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELYFANCFKL |
| Gene3D: G3DSA:3.80.10.10 | 540-823 | G3DSA:3.80.10.10 | MISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNG |
| HMMPfam: PF07725 IPR011713
|
602-621 | LRR_3 Leucine-rich repeat 3
|
NLVEVNMQDSELQKLWEGTQ |
| FPrintScan: PR00364 IPR000767
|
621-637 | DISEASERSIST Disease resistance protein
|
QCLANLKKIDLSRSSCL |
List of Contributions
There has not been any contribution yet.
