PRGDB00061545 (disease resistance protein)
| disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 227438170 (FJ842794) |
| Gene Class | TNL |
| Domain Type | NBS, TIR, LRR, Others |
| Gene Species | Brassica rapa subsp. pekinensis |
DNA Sequence
ATGACGTGGCAGAGGAGGAAGCAACAAGCTGAAATCGATGTTTTTTCTCCGGCGATACAAGCTCCGCTCTTATTAACCCATCTTCCGATCTGGAGCCGTTACAGCATCCGCCGCAGACCACGGCGTCCTCCGGCACCGGAAATGGTAAGATCCGCTACCGTTCGCCTTCCTCCACTGAGCTCACGGAGTCCGGAACTGCCACCGTTTCCTCCTCCGGTCACCATTCTCCTTCTTCCTCCGAATCTCATCAGGGACTCCTCTCTGTTGATGGTGGCTAAGCGAGCTCTGGAATTTGGATCGGAATTTGGGAATGAACCTGAGCTCTTCGTGCAGCTAAAACCGTGTACTATTTGCACATGCTCCGGAGAAGACCAAGTATCCGGAGTCGAGACATTTACTGGAAAGATTTCGACAATAAGTACCACTTCTCTTGTCAGTTCACAGCTGACTTCATCATCACTAGCACTTACCAAGAGATCGCAGGAACAGTTCAACATATTCTCACCAGGAGCAGGCATGACTATTTGCTCCCCTTTTACTGAAAAAGATAAAGAGAGTGCACAATGGTTGGTTGAAATCATCAGGCTGCTCTCGAGGAGACTGCGCAAGTCCCAAATCATTTGGACTGCCAAGTGCTATGAGAAGATGGCCAATGGCCAACTTGCTGAGCTTCACGTGTACAATGGCCAACTTGAGAAGATGTGGGGGAGGACTCATGTCATGGCTTCTTCATCTTGTAGTTCGTTGTATGACGTCTTCCTGAGCTTCCGTGGAGAAGACGTGCGCAAAGGCTTTCTTAGCCACGTTGTTAAAGAGTTCAAAAGCAAGGGGATCGAAGCGTTCATTGATAACGAGATGGAGCGAGGAAAATCTGTCGGTCCCACGCTTGAAAAAGCGATCAGACAATCAAGGGTCGCCATTGTCTTGCTCTCCCGTAACTACGCTTCTTCAAGCTGGTGTTTGGATGAGTTAGTGGAAATCATGAAGTGCAGGGAAGAGGATAAGCAAAGAGTGATAACCGTTTTCTACGAAGTGGATCCATCTGATGTTAGGAAGCAGATCGGAGATTTCGGAAAGGCATTTGATGACACTTGTGTGGGGAGAACAGAAGAGGTGACGCATGTATGGAGGCAAGCTTTGAAGGAAGTCGCGGACATAGCTGGTTATGCCTCGAGCAACTGTGGGAGTGAAGCTGATTTGATCAACGAACTTGCCTCGAATGTTATGGCTCGTGTCACGAAGATGAAAACGATGTTGAGCCTACAAGCAAAAGATGTTAAGGTGATTGGGATTTGGGGTCCTGCCGGGATTGGTAAGACGACCGCCGCCAGAGTTTTATACGACCAAGTCTCCCCAGAATTTCAGTTCAGCACGTTTTTGGAGAATATCAAAGGATGTTTTAAGAGGTCCTTTGGTAACGACCATCAGTTGAAATTGCGTTTTCAGGAAAAGTTGTTGTCTCAAATTTTTAACCAAAAGGATATTGTGGTTCGTCACTTGGGAGGGGCACCACAAAAGTTGAGTGACCAAAAAGTGTTGGTTGTTCTTGATGAAGTGGATAGCTGGTGGCAACTAGAGGAAGTGGCGAACAGAGCATGGTTTGGTCGCGGAAGTATGGTTATCATTACAACCGAAGATAGAAAACTTCTCAAGGCACTCGGACTCGAAGCCAATCAAATCTACAAGATGAAATTTCCAACTACAGATGAGGCTCTTCAGATCTTATGTCTATATGCCTTCGGTCAAAAGTTTCCTAATTATGATTTTGAAACTCTTGCTTGGGAAGTTACGGAACTTGCGGGTAATCTACCTCTAGGCTTGAGAGTCATGGGGTCGTATCTACGGGGAATGTCCAAGAAAGAGTGGATAGACGCACTACCAAGCCTGAGGTCTAGTCTTGACAGCGAAATTGAATCAACTCTAAAATTGAGCTACAACGTCTTAAGTAATAAAGAAAAATCTCTTTTTCTGCATATTGCATGTTTCTTTGCTGGTTTCAAGGTTGATAGGGTCAAGAGTATTCTTGAAAAAAGCGATTTAAACGTCAACCATGGGCTTCAAACCTTAGCTTATAGAAGTCTTATATATAGAGAGAATGGATACGTGGAGATGCATAGTTTACTGCAACAAATGGGTAAAGAAATTGGTACTGGAACTGTTCTAGGCATAAAGCTCCTAAAATTGGAGGGAGAGGAAATCAAAATAAGTAAAAGCGCTTTCCAAGGGATAAGAAATCTCCAGTTTCTAGATATCGATGGTGGTACCTTAAACACACCCGAAGGCCTCAACTGTCTTCCCAACAAACTCAGATACATACATTGGAAGCAGTCTCCATTGAGATTTTGGCCTTCCAAGTTCTCTGAAAAGTTACTTGTCGAACTAATCATGCCCAACAGCAACTTTGAGAAACTTTGGGAGGGAATCAAACCTTTCCCATGCCTCAAGCGGATGGATTTGAGCAGCTCTGAGTATCTGAAAGAGATTCCAGATCTCTCGAAAGCAACGAGTCTCGAGATATTAGATCTCCATTACTGCAGAAGTTTGTTAGAACTCCCTTCTTCTATCGGTAGGTTAATCAATCTCGAGAAATTGGACCTCCATTATTGCCGGAGTTTGGAAAAACTCAGTGGTTGCTCGAGTTTGAAAGAACTCGATCTGAGCGATTCTGGGATAGGGGCATTGGAATTGCCATCATCAGTCAGTACTTGGTCTTGTTTTTATAGATTGAATATGTCAGGGTTGAGTGACCTCAAGAAGTTCCCAAAAGTTCCTTACAGCATCGTAGAGTTGGTGTTGAGCGGCACAGGGATAGAGGAAGTTCCTCCATGGATTGAGAATCTATTTCGACTGCAGCAACTAATTATGTTTGGATGCAGAAATCTGGAAATTGTATCTCCAAACATTTCTAAGTTGGAGAATCTTCAGACTATTGCACTGTGTAAACATGACGACGTCCCTGAGATGAGCTATGGGGATGAAGTTTTTACAGCAGTGATCGTTGGGGGGCCTGACTCGCATGGCATCTGGCGTTTTCGATCAGACTTAAACGTGCACTACATTTTACCGATATGTTTACCGAAGAAGGCTCTTACATCTCCNATATCATTACATTTATTCAGTGGTGGTTTAAAAACTATCCCAGATTGCATCAGACGTCTCTCCGGACTAAGTGAGCTTTCAATCACTGGTTGCATAATTCTCACAGAACTGCCACAGCTTCCAGGTTCCTGTCTATCTCTAGATGCACACTTTTGTAGATCCTTGANGAGAATAAACTCTTCTTTTCAAAATCCAAATATATGCCTAAACTTTGCTGGCTGCTACAACCTGAATCAAAAAGCGAGAAAGCTCATCCAGACATCAGTTTGCAAATATGCGCTCTTACCGGATTCAAAGCTTGCATCTTACTGTCAAAAGTCAGTTTTCATTACCTTCGCGAGCAGAATGTGTTTTGTCGCGTTAGAGCATTTCCCTGAAGCCGAAGTCACCACTTTCAGCGAGCTCTCTTTTCTGTTCACAGTCGATGATTATAAAGCCTTGGTGGTTTATGGCTGTGGTGTACGAATTTTGGAGATTTTCTTTTTCCGGTGCACTGCAAGTTTCCAAGAAGAGAAGCATCAATCTCAACACCCCTGGCACAATCAAGCTGGGATTTTTTCAGCCTATGTATTACAGGTGGCGTACGTAATTAAAAGGAGGCAAAATATACTCAAAACTGAGAAGCTAACGGTTTCTTCTTCGTTTCTCTCTATTGCCAACAGAAACTTCCCGCCTTCTTCTTTTTTCCCCAATTCTCGAGTTTCTAGGGTTTCTAGTTTCGCGCTCTCAATGGAGGAATCAACGGCAGCAAACGCCGCTACTCTGAGGATGGAGTTAAAGAAGACGATGACGGAGATACTCGACGACGGAGGCGTAAGCGAAGATCGCGGCGAGACTGACGGAGCCTTGGTAGCAGTTGACGAGGCGGTTAGAATCCTGAATCGTCTGAGGGAAGTTGAATCGAAGATGCCGGACTCAGCAACTTCTTCGTCTTCTCCGGCTTCTGTGCTCGAAGTGCCAAAAGAGTTCAAGTGTATGCTCTCGCGTGCGATCATGAGCGAACCTGTAGTCATTGCTTCTGGCCAGACCTACGAAAAGAGATACATCCAACAGTGGCTGATGTATAAAGTGACATGTCCCAAGACCAAAGAAGTCCTCTCTCACCGTTTGTGGGTACCCAACCATGTGATCGCTGAGTTGATTACGGAATGGTGTCAAGTCAACAAGTACGATTTGCCAAAACCATCTGATGCACCCGTTGGACTATTCCCTGATGACATTGACCTATTGCTTGAGAGGATCTCCTCCCCCTCCTCAGTTGAAGATAAGACAGGAGCTGCAAACGAGCTGCGACGTCAGACCAAGAGATTTGCCGATGTCCCGGCCTTCTTTGTCGCTGAGATCCCTGAATCCATCACACGGTTGCTCACTCCGCTCTCTGCTTTGGGCGAGGACATTGACTCGAACCCGGGCCTTCAGAAGGATATCATCACCGCATTGCTCTACATCTCGTGTCTTGAGGAGAACAAAACAGCAGTTGCTCAGCACCCTCTTGCGATCCCACTGCTTACGAAGTCACTGAAGCAGGGGATTGCCAAGACACGAAGAAACTCCGCAGAGGCGTTATGGGAACTTTCGAAACTTGATTCTAACAAGATCCTCATCGGGAACTCAGAGACACTGGAGGCTTTGGTTCATGTTATCAAAGAGGATCATTTCACTGCCGCCATAGGTGCCGCTTACCGGAGAAGAGGGACAAAGTGGTTTCAGAAGGTTTGGTTCCCGCGCTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein | disease resistance protein [Brassica rapa subsp. pekinensis]. | MTWQRRKQQAEIDVFSPAIQAPLLLTHLPIWSRYSIRRRPRRPPAPEMVRSATVRLPPLSSRSPELPPFPPPVTILLLPPNLIRDSSLLMVAKRALEFGSEFGNEPELFVQLKPCTICTCSGEDQVSGVETFTGKISTISTTSLVSSQLTSSSLALTKRSQEQFNIFSPGAGMTICSPFTEKDKESAQWLVEIIRLLSRRLRKSQIIWTAKCYEKMANGQLAELHVYNGQLEKMWGRTHVMASSSCSSLYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADIAGYASSNCGSEADLINELASNVMARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVANRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSNKEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEMHSLLQQMGKEIGTGTVLGIKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGTLNTPEGLNCLPNKLRYIHWKQSPLRFWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALCKHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLDAHFCRSLXRINSSFQNPNICLNFAGCYNLNQKARKLIQTSVCKYALLPDSKLASYCQKSVFITFASRMCFVALEHFPEAEVTTFSELSFLFTVDDYKALVVYGCGVRILEIFFFRCTASFQEEKHQSQHPWHNQAGIFSAYVLQVAYVIKRRQNILKTEKLTVSSSFLSIANRNFPPSSFFPNSRVSRVSSFALSMEESTAANAATLRMELKKTMTEILDDGGVSEDRGETDGALVAVDEAVRILNRLREVESKMPDSATSSSSPASVLEVPKEFKCMLSRAIMSEPVVIASGQTYEKRYIQQWLMYKVTCPKTKEVLSHRLWVPNHVIAELITEWCQVNKYDLPKPSDAPVGLFPDDIDLLLERISSPSSVEDKTGAANELRRQTKRFADVPAFFVAEIPESITRLLTPLSALGEDIDSNPGLQKDIITALLYISCLEENKTAVAQHPLAIPLLTKSLKQGIAKTRRNSAEALWELSKLDSNKILIGNSETLEALVHVIKEDHFTAAIGAAYRRRGTKWFQKVWFPR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
238-389 | TIR Toll-Interleukin receptor
|
THVMASSSCSSLYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADIAGY |
| ProfileScan: PS50104 IPR000157
|
248-386 | TIR Toll-Interleukin receptor
|
SLYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADI |
| Gene3D: G3DSA:3.40.50.10140 | 248-383 | G3DSA:3.40.50.10140 | SLYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEV |
| HMMSmart: SM00255 IPR000157
|
249-386 | TIR Toll-Interleukin receptor
|
LYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADI |
| HMMPfam: PF01582 IPR000157
|
252-381 | TIR Toll-Interleukin receptor
|
VFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALK |
| HMMPanther: PTHR11017 | 254-1136 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADIAGYASSNCGSEADLINELASNVMARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVANRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSNKEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEMHSLLQQMGKEIGTGTVLGIKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGTLNTPEGLNCLPNKLRYIHWKQSPLRFWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALCKHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLDAHFCRSLXRINSSFQNPNICLNFAGCYNLNQKARKLIQTSVCKYALLPDSKLASY |
| HMMPanther: PTHR11017:SF20 | 254-1136 | PTHR11017:SF20,SUBFAMILY NOT NAMED | LSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADIAGYASSNCGSEADLINELASNVMARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVANRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSNKEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEMHSLLQQMGKEIGTGTVLGIKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGTLNTPEGLNCLPNKLRYIHWKQSPLRFWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALCKHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLDAHFCRSLXRINSSFQNPNICLNFAGCYNLNQKARKLIQTSVCKYALLPDSKLASY |
| superfamily: SSF52540 | 303-657 | SSF52540 | SRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGRTEEVTHVWRQALKEVADIAGYASSNCGSEADLINELASNVMARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVANRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSNKEKSLFL |
| HMMPfam: PF00931 IPR002182
|
411-671 | NB-ARC,NBS NB-ARC
|
RVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVANRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSNKEKSLFLHIACFFAGFKVDRV |
| Gene3D: G3DSA:3.40.50.300 | 427-468 | G3DSA:3.40.50.300 | KVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFK |
| FPrintScan: PR00364 IPR000767
|
428-443 | DISEASERSIST Disease resistance protein
|
VIGIWGPAGIGKTTAA |
| FPrintScan: PR00364 IPR000767
|
506-520 | DISEASERSIST Disease resistance protein
|
KLSDQKVLVVLDEVD |
| FPrintScan: PR00364 IPR000767
|
600-614 | DISEASERSIST Disease resistance protein
|
AGNLPLGLRVMGSYL |
| superfamily: SSF52058 | 703-1108 | SSF52058,LRR | EMHSLLQQMGKEIGTGTVLGIKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGTLNTPEGLNCLPNKLRYIHWKQSPLRFWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALCKHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLDAHFCRSLXRINSSFQNPNICLNFAGCY |
| Gene3D: G3DSA:3.80.10.10 | 744-758 | G3DSA:3.80.10.10 | RNLQFLDIDGGTLNT |
| HMMPfam: PF07725 IPR011713
|
791-809 | LRR_3 Leucine-rich repeat 3
|
LVELIMPNSNFEKLWEGIK |
| Gene3D: G3DSA:3.80.10.10 | 803-981 | G3DSA:3.80.10.10 | KLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALCK |
| FPrintScan: PR00364 IPR000767
|
832-848 | DISEASERSIST Disease resistance protein
|
SKATSLEILDLHYCRSL |
| superfamily: SSF57850 | 1334-1430 | SSF57850,NBS | SKMPDSATSSSSPASVLEVPKEFKCMLSRAIMSEPVVIASGQTYEKRYIQQWLMYKVTCPKTKEVLSHRLWVPNHVIAELITEWCQVNKYDLPKPSD |
| Gene3D: G3DSA:3.30.40.10 IPR013083
|
1351-1407 | Znf_RING/FYVE/PHD Zinc finger, RING/FYVE/PHD-type
|
EVPKEFKCMLSRAIMSEPVVIASGQTYEKRYIQQWLMYKVTCPKTKEVLSHRLWVPN |
| HMMPfam: PF04564 IPR003613
|
1352-1421 | U-box U box domain
|
VPKEFKCMLSRAIMSEPVVIASGQTYEKRYIQQWLMYKVTCPKTKEVLSHRLWVPNHVIAELITEWCQVN |
| HMMSmart: SM00504 IPR003613
|
1355-1417 | Ubox U box domain
|
EFKCMLSRAIMSEPVVIASGQTYEKRYIQQWLMYKVTCPKTKEVLSHRLWVPNHVIAELITEW |
| Gene3D: G3DSA:1.25.10.10 IPR011989
|
1408-1583 | ARM-like Armadillo-like helical
|
HVIAELITEWCQVNKYDLPKPSDAPVGLFPDDIDLLLERISSPSSVEDKTGAANELRRQTKRFADVPAFFVAEIPESITRLLTPLSALGEDIDSNPGLQKDIITALLYISCLEENKTAVAQHPLAIPLLTKSLKQGIAKTRRNSAEALWELSKLDSNKILIGNSETLEALVHVIKE |
| superfamily: SSF48371 IPR016024
|
1439-1584 | ARM-type_fold,NBS Armadillo-type fold
|
DIDLLLERISSPSSVEDKTGAANELRRQTKRFADVPAFFVAEIPESITRLLTPLSALGEDIDSNPGLQKDIITALLYISCLEENKTAVAQHPLAIPLLTKSLKQGIAKTRRNSAEALWELSKLDSNKILIGNSETLEALVHVIKED |
List of References
Jeong-Hwan Mun, Hee-Ju Yu, Soomin Park, Beom-Seok Park
Genome-wide identification of NBS-encoding resistance genes in Brassica rapa.
Mol. Genet. Genomics: 2009, 282(6);617-31
PubMed:19838736
WorldCat.org
DOI
(I p)
List of Contributions
There has not been any contribution yet.
