PRGDB00061557 (disease resistance protein)
| disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 227438146 (FJ842782) |
| Gene Class | TNL |
| Domain Type | NBS, TIR, LRR, Others |
| Gene Species | Brassica rapa subsp. pekinensis |
DNA Sequence
ATGGCTTCTTCTTCTTCTTCCTCGCCTCGCACATGGAGATACCGCGTCTTCACTAGCTTCCACGGACCCGACGTCCGCAAAACCTTTCTCAGTCATTTACGCAAACAGTTTGCCTGCAATGGGATTTCGATGTTCAATGATCAAGCGATCGAGAGAAGCCACACCATCGCCCCTGCTCTCACGCAAGCGATCAGAGAATCGAGGATCTCCATCGTGGTGTTAACGAAGAACTATGCTTCTTCCAGCTGGTGTTTGGATGAGCTTTTGGAGATTCTGAAATGCAAGGAAGAGATGGGTCAGATAGTGATGACGATCTTCTACGGAGTAGATCCTTCTCATGTTCGGAAACAAACCGGAGATTTCGGGAAAGTCTTAAAGAAAACGTGTTCTGGTAAAACAGAGGAAGAGAAGCAAAGATGGAGTCAAGCTTTGACCGATGTGGGAAACATAGCCGGGGAACACTTCCTCAACTGGGACAAGGAATCGGAGATGATTGAAAAGATTGCTAGAGATGTCTCAAACAAGCTAAATGCTACAGTCTCTAGGGATTTTGAAGACATGGTTGGTATTGAAGCACACTTGGATAAGATGCAATCTTTGTTACATTCAGATGAGGATGGAGCTATGATTGTTGGAATCTGTGGCCCTGCTGGCATTGGTAAGACTACCATTGCCAGGGCTTTACATAGTCGGCTCTCTAGCGGTTTCCAGCTTACTTGTTTTATGGAGAATCTTAGAGGAAGCTGTAACAGTGGTGGTCTTGATGAGTATGGATTGAAGCTGCGTTTACAAGAGCTACTTCTTTCCAAGATTTTTAACCAAAACGGTATGAGGATATACCATTTAGGTGCGATACCAGAAAGGTTATGCGACCTAAAAGTGCTTATCATTCTTGATGATGTGGACGATCTGCAGCAGCTTGAGGCTTTGGCTGATGAAACTAACTGGTTTGGTGATGGAAGCAGGATTATCGTAACCACGGAAGATCAAGAGCTTTTGGAGCAACATGGTATCACCAATATATACCATGTGGATCTTCCAACTGAAAAAGAGGCTCGTAAGATCTTTTGCAGATATGCTTTTAGACAGAGCTTACCACCATATGGTTATGAAAATCTTGCAGAAAGAGCAACAGAGCTGTGCGGCAATCTTCCTTTTGGTCTCCGTGTCATGGGTTCAATGTTACGGGGAAAGAAAGAAGACGACTGGGAAAGTATATTGTGCAGGCTAGAAAATAGCAATATACCAAAGATCGAAGCAGTACTTAGAGTTGGATACGACAGTTTACATGAGAAGGATCAAATTCTGTTTCACCTCATTGCAGTCTTCTTCAACTACGAAAACGATGGCCATGTGAAAACAATGCTAGCTGACAGTGGCTTGGATGTTAGACTCGGGTTGAAAACCCTCGCCTACAAATCTCTCATAAAAATATCTTCGGAAGGAGAAGTAGTGATGCACAAGTTACTACAGCAAGTGGGCAGACAAGCGATTCAAAGACAGGAGCCTTGGAAACGCCAAATTCTAATTGATACTGATGACATTCGAGATGTCCTTGAAAATGATTCTGGTAGTAGAAGCTTGATGGGGATATCTTTTGATATGTCTACAATCAAAGACGACATGGATATTAGCGCAAGAGTTTTTAAAAGTATGCGTACTCTTCGATTCCTCAGGGTCTACAACACGAGATGTGATACAAATGTTAGAGTGCATTTACCCGAGGACATGGAGTTTCCACCTCGTCTGAAGTTATTACACTGGGAGGTATATCCGAGGAAGTGTCTTCCTCGTACATTTTGTCCCGAACATCTTGTGGAACTACACTTGACAGATACCCAGCTTGAGCAATTGTGGGAAGGAACCCAGCCCCTCACAAGTCTCAAGAAGATGGTTTTGGTTTCGTGCTTGTGTCTAAAGGAACTCCCGGATCTAGCAAATGCTACAAATCTCGAAATATTGGATGTGTGTGGATGCCAGAGTTTGGTAGAGATTCATTCCTCTGTTGGAAATCTTCATAGACTGCAGAGTTTGGATATGATTTTCTGTAAAAAGCTACAGGTTGTTCCAACTCTCTTCAACTTGACATCTCTTGAATCACTCGTGATAATGGGATCCTACCAAATGAGGGAACTTCCAGATATTTCCACGACCATCAGAGAACTTTCAATCCCAGAAACAATGTTAGAAGAATTTCTTGAATCAACTAGACTCTGGTCTCATCTTCAGTGTCTCGAGATATTTGGCTGTGCCATTACACATCAGTTTATGGCACATCCATCTCAGAGAAATTTGATGGTAATGCGAAGTGTCACGGGTATTGAGAGAATTCCAGACTGTATCAAATGTCTTCATGGGTTAAAAGAGCTAAGTATATATGGCTGTCCAAAACTTGCATCACTCCCAGAGCTTCCTCGGTCGCTCACAACACTAACAGTATACAAATGTCCTTCACTGGAGACACTAGAACCTTTCCCTTTTGGCGCCCGGATTGAGGATCTCTCTTTCCTCGATTGCTTTAGATTGGGTCGAAAAGCAAGGCGACTAATTACCCAACAATCATCACGGGTATGCCTACCTGGAAGAAATGTACCTGCAGAGTTCCATCACCGGGCTATAGGAAATTTCGTGGCCATATGCTCAAATGCCTACCGATTTAAGATTTGTGCCGTGATTTCCCCTAAACAGGTGATGGTGGAAGATCAAGTTATTGAATTACTGTGTCACATACTCATAAATGGTTGTCCCATGAAGAGCACCTTGAAAAACAAATTTGATGTCGAGATTACAATCCAATTAGAACATCTCATTATATTCCCCTCCACATTGCTTACGGTAGACCGACGGCCTGAGCAGTACAGCGAGATATTGTTTGAATTCAGCACCACATCCCAGGACATCGAAGTTATTGAATGTGGTGTTCAGATCTTGAGGGACAAAACCGGAAGCTGTGAATCTAATTCAGAACAACTATTGGAATTGGAATTGGAAGACGACCTTGACTACGATGCACCAAGAGTAGATACCATTAAGGATTTTGCTAAGTTTCTTCCTTCGCTTCTTATTTTCCTTTCGAGTTTGATTCCAAGTGTTCTTTTTTATAGCTTACTAAAGCAACACAGGCACAGAGTACACTTATATGAATCATGGCTTGTTGGAAGAACTAGACATCATCAGAAAGAGATGAAGTTTCCATCAAAAGAAGTCTCCACTGACCTTAGTGTACAGTCGTGTGAGGAATCGGAGATGATTGAAAAGATTGCTAGAGATGTCTCAAACAAGCTAAATTCTACAGTCTCTACGGATTTTGAAGACATGGTTGGTATTGAAGCCCACTTGGAGAAGATGCAGTCTTTGTTACATTTAGATGATGAGGGTGGAGCTATGTTTGTTGGAATCTGTGGTCCTGCTGGCATTGGTAAGACTACCATTGCCAGAGCTTTACATAGCAGGCTCTCTAGCGGTTTTCAGCATTCTTGTTTTATGGAGAATCTTAGGGGAAGCTGTTGTAACAGTGGTCTTGACGAGTATGGATTGAAGCTGCGTTTACAAGAGCTACTTCTTTCCAAGATTTTTAACCAAAACGGTATGAGGATATACCATTTAGGTGCGATACCAGAAAGGCTGTGTGACCAAAAAGTGCTTATTATTCTTGATGATGTGGATGATCTAAAGCAGCTTGAGGCTTTGGCTGATGAAACTAAATGGTTTGGTGATGGAAGCAGAGTTATCTTGATGCTCGAGCTTGATGCTCGTCAGATCTTCTGTAGGATTGCATTTAGACAGCTCTCAGCACCCCATGGATTTGAAAAACTTGTGGAAAGAGTAGTAAATCTTTGTAGCAACCTTCCTTTGGGTCTCCGTGTCATGGGTTCATCTTTACGCAGAAAGAAAGTAGATGACTGGGAAGCTATATTGCAGAGGCTAGAGAATAGCCTTAATCGAGATATCGAAGGAGTACTTAGAGTCGGCTACGACAATTTACATAAGGATGATCAGTTCTTATTTCAGCTCATTGCATGCTTCTTCAACTACCAAGACGATGATCGTGTGAAAGCAATGCTCGTTGATAGTAACTTGGATGTTAGACTCGGGTTAAAAACTCTCTCGTACAAATCTCTCATACAAATATCTGCAGAGGGAACTATAGTGATGCACAAGTTACTACAACAAGTGGGCAGAGAAGCGGTTCATTTACAGGAGCCTAGGAAACGCCAAATCCTAATAGATGCTCACCAGATTTGTGATGTCCTCGAAAATGACTATGATAGTGCAAGTGTGATGGGTATATCTTTTGATACATCCACAATCCCAAACGGAGTGTGTATAAGCGCACAAGCTTTTAGAACAATGCGTGATCTTCGGTTTCTCAGCATCTACGAGACAAGACGTGATCCAAATGTTAGAATGCATTTACCTGAGGACATGAGTTTTCCACCTCTTCTAAGGTTATTACACTGGGAGGTATATCCAGGAAAGTGTCTTCCTCATACTCTTAGGCCAGAACATCTTGTGGAACTCTGTTTTGTTAACAGCAAGCTCGAGCAGCTTTGGCAAGGAATCCAGCCTCTTACAAATCTCAAGAAGATGGATTTGTCCGGGTCTCTGAGTTTGAAGGAAGTCCCTGATCTCTCGAATGCTACACATCTGAAGAGATTAAATCTAACAGGTTGCTGGAGTTTGGTAGAGATTCCTTCCTCTATTGGAGATCTTCATAAACTAGAGGAGCTGGAGATTAATTTATGTATAAGTCTACAGGTTTTTCCGAGTCACCTCAACTTGGCATCTCTTGAAACACTAGAGATGGTAGGATGCTGGCAACTGAGAAAAATTCCATATGTTTCGACCAAATCCCTCGTAATCGGAGACACAATGCTAGAAGAGTTTCCTGAATCACTGTGCCTAGAAGCGAAGAGAGTAATTACACAGCAATCATTTAGAGCATACTTTCCAGGAAAAGAGATGCCTGCAGAGTTCGATGATCATCGATCATTTGGAAGTTCCTTGACCATCCGTCCCGCTGTCTGCAAGTTTAGGATTTGCCTGGTGCTTTCCCCTAAACCGGATATGGAAGAAGCTTATTTCAGATTACTGTTTTGCATACGCGTAAAAGGTTGTCCCAGTGACGAAGACATGCTTTGGTTAGATCTCCCTAAAATCCGAGGGGAACATCTTTTTATATTTCAAGCTGAGTTTGTTGAACATCACGAGGAGATGGTGTTCAAATTCAGCACCTCATCCCATGAAGTCGACGTTGCTGAATGTGGTGTCCAGGTTTTGACAGATGAATCTTGTTCAGAACAAGTGTCTGAAGACGGCGATGATGTTCTCTCTGATGATAAGAGCAATGGATGTGATGAACCCAGAATCTTATCCCTTCAGTCAAACGTCAGCACATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein | disease resistance protein [Brassica rapa subsp. pekinensis]. | MASSSSSSPRTWRYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQAIQRQEPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAICSNAYRFKICAVISPKQVMVEDQVIELLCHILINGCPMKSTLKNKFDVEITIQLEHLIIFPSTLLTVDRRPEQYSEILFEFSTTSQDIEVIECGVQILRDKTGSCESNSEQLLELELEDDLDYDAPRVDTIKDFAKFLPSLLIFLSSLIPSVLFYSLLKQHRHRVHLYESWLVGRTRHHQKEMKFPSKEVSTDLSVQSCEESEMIEKIARDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVILMLELDARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGREAVHLQEPRKRQILIDAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVSTKSLVIGDTMLEEFPESLCLEAKRVITQQSFRAYFPGKEMPAEFDDHRSFGSSLTIRPAVCKFRICLVLSPKPDMEEAYFRLLFCIRVKGCPSDEDMLWLDLPKIRGEHLFIFQAEFVEHHEEMVFKFSTSSHEVDVAECGVQVLTDESCSEQVSEDGDDVLSDDKSNGCDEPRILSLQSNVST |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
2-153 | TIR Toll-Interleukin receptor
|
ASSSSSSPRTWRYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNIAGE |
| Gene3D: G3DSA:3.40.50.10140 | 10-147 | G3DSA:3.40.50.10140 | RTWRYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDV |
| ProfileScan: PS50104 IPR000157
|
12-150 | TIR Toll-Interleukin receptor
|
WRYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNI |
| HMMSmart: SM00255 IPR000157
|
13-150 | TIR Toll-Interleukin receptor
|
RYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNI |
| HMMPfam: PF01582 IPR000157
|
16-145 | TIR Toll-Interleukin receptor
|
VFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALT |
| HMMPanther: PTHR11017:SF20 | 36-1002 | PTHR11017:SF20,SUBFAMILY NOT NAMED | QFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQAIQRQEPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAICSNAYRFKICAVISPKQVMVEDQVIELLCHILINGCPMKSTLKNKFDVEITIQLEHLIIFPSTLLTVDRRPEQYSEILFEFSTTSQDIEVIECGVQILRDKTGSCESNSEQLLELELEDDLDY |
| HMMPanther: PTHR11017 | 36-1002 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | QFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQAIQRQEPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAICSNAYRFKICAVISPKQVMVEDQVIELLCHILINGCPMKSTLKNKFDVEITIQLEHLIIFPSTLLTVDRRPEQYSEILFEFSTTSQDIEVIECGVQILRDKTGSCESNSEQLLELELEDDLDY |
| superfamily: SSF52540 | 67-438 | SSF52540 | SRISIVVLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKTEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKDQILFH |
| Gene3D: G3DSA:3.40.50.300 | 182-221 | G3DSA:3.40.50.300 | RDFEDMVGIEAHLDKMQSLLHSDEDGAMIVGICGPAGIGK |
| HMMPfam: PF00931 IPR002182
|
191-448 | NB-ARC,NBS NB-ARC
|
EAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLIAVFFNYEN |
| HMMSmart: SM00382 IPR003593
|
207-348 | AAA,NBS ATPase, AAA+ type, core
|
GAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPT |
| Gene3D: G3DSA:3.40.50.300 | 222-248 | G3DSA:3.40.50.300 | TTIARALHSRLSSGFQLTCFMENLRGS |
| Gene3D: G3DSA:3.40.50.300 | 293-383 | G3DSA:3.40.50.300 | KVLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGN |
| superfamily: SSF52058 | 494-844 | SSF52058,LRR | GRQAIQRQEPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGR |
| Gene3D: G3DSA:3.80.10.10 | 544-828 | G3DSA:3.80.10.10 | ISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFG |
| Gene3D: G3DSA:3.40.50.300 | 1075-1136 | G3DSA:3.40.50.300 | VQSCEESEMIEKIARDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGP |
| superfamily: SSF52540 | 1089-1317 | SSF52540 | RDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVILMLELDARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDI |
| HMMPfam: PF00931 IPR002182
|
1110-1245 | NB-ARC,NBS NB-ARC
|
EAHLEKMQSLLHLDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVIL |
| HMMSmart: SM00382 IPR003593
|
1127-1264 | AAA,NBS ATPase, AAA+ type, core
|
GAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVILMLELDARQIFCRIAFRQLS |
| FPrintScan: PR00364 IPR000767
|
1130-1145 | DISEASERSIST Disease resistance protein
|
FVGICGPAGIGKTTIA |
| Gene3D: G3DSA:3.40.50.300 | 1137-1166 | G3DSA:3.40.50.300 | AGIGKTTIARALHSRLSSGFQHSCFMENLR |
| Gene3D: G3DSA:3.40.50.300 | 1204-1227 | G3DSA:3.40.50.300 | AIPERLCDQKVLIILDDVDDLKQL |
| FPrintScan: PR00364 IPR000767
|
1208-1222 | DISEASERSIST Disease resistance protein
|
RLCDQKVLIILDDVD |
| Gene3D: G3DSA:3.40.50.300 | 1240-1241 | G3DSA:3.40.50.300 | GS |
| HMMPfam: PF00931 IPR002182
|
1251-1347 | NB-ARC,NBS NB-ARC
|
ARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQD |
| Gene3D: G3DSA:3.40.50.300 | 1275-1311 | G3DSA:3.40.50.300 | RVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLEN |
| FPrintScan: PR00364 IPR000767
|
1280-1294 | DISEASERSIST Disease resistance protein
|
CSNLPLGLRVMGSSL |
| superfamily: SSF46785 | 1315-1419 | SSF46785 | RDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGREAVHLQEPRKRQILIDAHQICDVLE |
| superfamily: SSF52058 | 1431-1634 | SSF52058,LRR | SFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVSTKSLVIGDTMLEEFPESLC |
| Gene3D: G3DSA:3.80.10.10 | 1441-1620 | G3DSA:3.80.10.10 | VCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVSTKSLV |
| FPrintScan: PR00364 IPR000767
|
1522-1538 | DISEASERSIST Disease resistance protein
|
QPLTNLKKMDLSGSLSL |
| HMMPfam: PF00560 IPR001611
|
1549-1570 | LRR_1 Leucine-rich repeat
|
HLKRLNLTGCWSLVEIPSSIGD |
List of References
Jeong-Hwan Mun, Hee-Ju Yu, Soomin Park, Beom-Seok Park
Genome-wide identification of NBS-encoding resistance genes in Brassica rapa.
Mol. Genet. Genomics: 2009, 282(6);617-31
PubMed:19838736
WorldCat.org
DOI
(I p)
List of Contributions
There has not been any contribution yet.
