PRGDB00061583 (disease-resistance protein)
disease-resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 223452612 (FJ014882) |
Gene Class | T |
Domain Type | TIR, LRR |
Gene Species | Glycine max |
DNA Sequence
ATGGCTGCAACAACAAGTTCCCGTGCATCCATCTACGATGTGTTCCTCAACTTCAGAGGGGAAGACACACGCTATGGTTTCACCAGCAATCTCTACAGGGCTCTTTCTGACAAGGGAATTCGTACCTTCTTTGACGAAGAGAAGCTTCACAGCGGAGAGGAAATAACACCTGCACTTTTGAAGGCAATTAAAGATTCCAGAATTGCCATCACTGTGCTCTCTGAAGACTTTGCTTCTTCCTCATTTTGCTTAGATGAACTTACATCCATTGTTCACTGCGCCCAGTATAATGGGATGATGATTATACCAGTGTTTTATAAGGTGTATCCTTCTGATGTCAGACACCAGAAGGGTACTTATGGAGAAGCATTGGCTAAGCATAAGATAAGATTTCCAGAAAAGTTCCAGAATTGGGAGATGGCTCTGCGTCAAGTTGCTGACTTGTCTGGCTTTCATTTCAAATACAGAGATGAATATGAGTACAAGTTTATTGAGAGAATTGTTGCGTCGGTCTCTGAGAAGATTAATCCTGCTAGAGTACATGTTGCCGATCTGCCTGTTGAACAAGAGTCCAAAGTGCAAGGAACTCATCAAGAGCAAGAATACAGAGAGGCTTTCAAGGTGTTTGACAAGGATCAAAATGGCTACATTTCAGCAAGTGAGTTGAGGCAAGTTCTGATCAAACTGGGTGAAAACACAACTGCTGGAGAGGTGGAGGAGATGATTGCAACTGCAGATTTGGATGGTGATGGTCAAATTAGCTATGAGGAATTTGTTAAGACTATGAAAATTTAA
Protein sequences
Name | Description | Sequence |
---|---|---|
disease-resistance protein | disease-resistance protein [Glycine max]. | MAATTSSRASIYDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMALRQVADLSGFHFKYRDEYEYKFIERIVASVSEKINPARVHVADLPVEQESKVQGTHQEQEYREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVKTMKI |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52200 IPR000157
|
1-151 | TIR Toll-Interleukin receptor
|
MAATTSSRASIYDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMALRQVADLSGF |
Gene3D: G3DSA:3.40.50.10140 | 9-145 | G3DSA:3.40.50.10140 | ASIYDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMALRQV |
ProfileScan: PS50104 IPR000157
|
10-148 | TIR Toll-Interleukin receptor
|
SIYDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMALRQVADL |
HMMSmart: SM00255 IPR000157
|
11-148 | TIR Toll-Interleukin receptor
|
IYDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMALRQVADL |
HMMPfam: PF01582 IPR000157
|
14-142 | TIR Toll-Interleukin receptor
|
VFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAITVLSEDFASSSFCLDELTSIVHCAQYNGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIRFPEKFQNWEMAL |
HMMPanther: PTHR23050 | 192-262 | PTHR23050,CALCIUM BINDING PROTEIN | KVQGTHQEQEYREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVKTM |
HMMPanther: PTHR23050:SF20 | 192-262 | PTHR23050:SF20,CALMODULIN | KVQGTHQEQEYREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVKTM |
superfamily: SSF47473 | 194-263 | SSF47473 | QGTHQEQEYREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVKTMK |
Gene3D: G3DSA:1.10.238.10 IPR011992
|
194-263 | EF-Hand_type EF-hand-like domain
|
QGTHQEQEYREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVKTMK |
ProfileScan: PS50222 IPR018249
|
197-232 | EF_HAND_2 EF-HAND 2
|
HQEQEYREAFKVFDKDQNGYISASELRQVLIKLGEN |
HMMSmart: SM00054 IPR002048
|
201-229 | EFh Calcium-binding EF-hand
|
EYREAFKVFDKDQNGYISASELRQVLIKL |
HMMPfam: PF13499 | 202-260 | EF_hand_5,EF-hand domain pair | YREAFKVFDKDQNGYISASELRQVLIKLGENTTAGEVEEMIATADLDGDGQISYEEFVK |
PatternScan: PS00018 IPR018247
|
210-222 | EF_HAND_1 EF-Hand 1, calcium-binding site
|
DKDQNGYISASEL |
ProfileScan: PS50222 IPR018249
|
233-264 | EF_HAND_2 EF-HAND 2
|
TTAGEVEEMIATADLDGDGQISYEEFVKTMKI |
HMMSmart: SM00054 IPR002048
|
237-264 | EFh Calcium-binding EF-hand
|
EVEEMIATADLDGDGQISYEEFVKTMKI |
PatternScan: PS00018 IPR018247
|
246-258 | EF_HAND_1 EF-Hand 1, calcium-binding site
|
DLDGDGQISYEEF |
List of Contributions
There has not been any contribution yet.