PRGDB00061812 (NBS-LRR disease resistance protein)

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NBS-LRR disease resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 320154503 (GU258505)
Gene Class Unknown
Domain Type LRR
Gene Species Oryza latifolia

Comment?

Oryza latifolia seed accession number 101207 NBS-LRR disease resistance protein (Pikh) gene, complete cds.

DNA Sequence

GCTGTGAGGGTCTACAGGCTCTTGATCGCCTCAAGAAGTTGGAGATAAGTGGTTGTCATGAATTGTCATGCCTCCCACAGGGTTTGCAGCATCTTTCCTCTCTCACCAGCTTGAAAATTGATAACTGCAACAAATTGGAGATTTTGCCAGAATGAATGGACCTTGAAAAGGTTTCAGACACTGAAGATGCAAGAATGGCAAAACTTCAAGAGAAAGAAAAGCTCGAGACATTGATGTTGAGGTGGAATATGGATGCTGGAAATGCCAGTAGAATAGATCATGAAGTACTTGAAACCCTCCAACCTAACCAGTGCCTGAAAACTTTGGAGATTGTTGCGTATGAAGGACATGCATTTCCATCTTGGATAACAAGCACTGAGCCATATCTCACATCTCTGGTTGAGATAAGGTTGGTTAATCTGAGATCATGTGAAAATGCTTTACCTCCACTTGGGCTACTGCCATGTCTGAAGATTGTGGAGATAAGCCGAGTTGATAATATCAGTTGTATTGACGATGATTTCTATGGTCAGAACG


Protein sequences

Name Description Sequence
NBS-LRR disease resistance protein NBS-LRR disease resistance protein [Oryza latifolia].

MDLEKVSDTEDARMAKLQEKEKLETLMLRWNMDAGNASRIDHEVLETLQPNQCLKTLEIVAYEGHAFPSWITSTEPYLTSLVEIRLVNLRSCENALPPLGLLPCLKIVEISRVDNISCIDDDFYGQNGCEGLQALDRLKKLEISGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPE

Domains

Domain Start-End Description Sequence

Gene3D: G3DSA:3.80.10.10
14-71 G3DSA:3.80.10.10

MAKLQEKEKLETLMLRWNMDAGNASRIDHEVLETLQPNQCLKTLEIVAYEGHAFPSWI

superfamily: SSF52058
37-178 SSF52058,LRR

ASRIDHEVLETLQPNQCLKTLEIVAYEGHAFPSWITSTEPYLTSLVEIRLVNLRSCENALPPLGLLPCLKIVEISRVDNISCIDDDFYGQNGCEGLQALDRLKKLEISGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPE

HMMPanther: PTHR23155
46-178 PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

ETLQPNQCLKTLEIVAYEGHAFPSWITSTEPYLTSLVEIRLVNLRSCENALPPLGLLPCLKIVEISRVDNISCIDDDFYGQNGCEGLQALDRLKKLEISGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPE

HMMPanther: PTHR23155:SF216
46-178 PTHR23155:SF216,OS11G0640600 PROTEIN

ETLQPNQCLKTLEIVAYEGHAFPSWITSTEPYLTSLVEIRLVNLRSCENALPPLGLLPCLKIVEISRVDNISCIDDDFYGQNGCEGLQALDRLKKLEISGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPE

Gene3D: G3DSA:3.80.10.10
124-171 G3DSA:3.80.10.10

YGQNGCEGLQALDRLKKLEISGCHELSCLPQGLQHLSSLTSLKIDNCN






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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