PRGDB00061841 (disease resistance protein RPP8)
disease resistance protein RPP8 | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 291464726 (GU646327) |
Gene Class | CNL |
Domain Type | LRR, NBS |
Gene Species | Arabidopsis lyrata subsp. petraea |
DNA Sequence
GTGAAGTTTGAAGGAGGGAAGTTACCTTCTAGCATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTATACGACGCTAAGGTATCTCATCTACCTTCTAGTATAGGGAATTTAAAGCTTCTGCTCTATTTGAACTTACGTGTTGCTATTGGGGAACCAGTTCATGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGAGGTACCTTTGCCTACCTTGGTTTATGCATGATAAAACCAAGTTGGAATTGGGTGATCTAGTGAACCTGGAGCACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCCTCCGTATGACCAAGCTCAGGGGTCTCTCTGTATCTTTGAGCGAGAGGTATACTTTTGAAGCCCTATTGTCATCTCTCCGTCAATTGCGTAACCTCGAGACGCTTTATTTGGATTTTCGGTACAAAACCTATACGGTTGATTATGTGGGAGAGTTGGATCTGGATTTTATTCATCTAAAAGAGTTAGGATTGACAGTACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCCCCACCTTGAACACATATATCTATATTATTGCGGCATTGAGGAGGATCCAATGCCGATTCTAGAAAAGTTGCTTCATTTGAAGTCGGTTGAATTAAGCTCTGAGGCTTTCCTTGGGAGGAGAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTATGTGCTCTAGAAATATCTGAAGAATTAGAGTTGGAAGAGTGGATAGTAGAAGAAGGGTCG
Protein sequences
Name | Description | Sequence |
---|---|---|
disease resistance protein RPP8 | disease resistance protein RPP8 [Arabidopsis lyrata subsp. petraea]. | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
disease resistance protein RPP8 | disease resistance protein RPP8 [Arabidopsis lyrata subsp. petraea]. | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR23155:SF231 | 1-255 | PTHR23155:SF231,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
HMMPanther: PTHR23155 | 1-255 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
HMMPanther: PTHR23155:SF231 | 1-255 | PTHR23155:SF231,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
HMMPanther: PTHR23155 | 1-255 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
superfamily: SSF52058 | 2-242 | SSF52058,LRR | KFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISE |
superfamily: SSF52058 | 2-242 | SSF52058,LRR | KFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISE |
Gene3D: G3DSA:3.80.10.10 | 8-220 | G3DSA:3.80.10.10 | LPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAF |
Gene3D: G3DSA:3.80.10.10 | 8-220 | G3DSA:3.80.10.10 | LPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAF |
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