PRGDB00061841 (disease resistance protein RPP8)
| disease resistance protein RPP8 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 291464726 (GU646327) |
| Gene Class | CNL |
| Domain Type | LRR, NBS |
| Gene Species | Arabidopsis lyrata subsp. petraea |
DNA Sequence
GTGAAGTTTGAAGGAGGGAAGTTACCTTCTAGCATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTATACGACGCTAAGGTATCTCATCTACCTTCTAGTATAGGGAATTTAAAGCTTCTGCTCTATTTGAACTTACGTGTTGCTATTGGGGAACCAGTTCATGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGAGGTACCTTTGCCTACCTTGGTTTATGCATGATAAAACCAAGTTGGAATTGGGTGATCTAGTGAACCTGGAGCACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCCTCCGTATGACCAAGCTCAGGGGTCTCTCTGTATCTTTGAGCGAGAGGTATACTTTTGAAGCCCTATTGTCATCTCTCCGTCAATTGCGTAACCTCGAGACGCTTTATTTGGATTTTCGGTACAAAACCTATACGGTTGATTATGTGGGAGAGTTGGATCTGGATTTTATTCATCTAAAAGAGTTAGGATTGACAGTACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCCCCACCTTGAACACATATATCTATATTATTGCGGCATTGAGGAGGATCCAATGCCGATTCTAGAAAAGTTGCTTCATTTGAAGTCGGTTGAATTAAGCTCTGAGGCTTTCCTTGGGAGGAGAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTATGTGCTCTAGAAATATCTGAAGAATTAGAGTTGGAAGAGTGGATAGTAGAAGAAGGGTCG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein RPP8 | disease resistance protein RPP8 [Arabidopsis lyrata subsp. petraea]. | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
| disease resistance protein RPP8 | disease resistance protein RPP8 [Arabidopsis lyrata subsp. petraea]. | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF231 | 1-255 | PTHR23155:SF231,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
| HMMPanther: PTHR23155 | 1-255 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
| HMMPanther: PTHR23155:SF231 | 1-255 | PTHR23155:SF231,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
| HMMPanther: PTHR23155 | 1-255 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VKFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISEELELEEWIVEEGS |
| superfamily: SSF52058 | 2-242 | SSF52058,LRR | KFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISE |
| superfamily: SSF52058 | 2-242 | SSF52058,LRR | KFEGGKLPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAFLGRRMLCSKGGFPQLCALEISE |
| Gene3D: G3DSA:3.80.10.10 | 8-220 | G3DSA:3.80.10.10 | LPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAF |
| Gene3D: G3DSA:3.80.10.10 | 8-220 | G3DSA:3.80.10.10 | LPSSIGGLIHLRFLSLYDAKVSHLPSSIGNLKLLLYLNLRVAIGEPVHVPNVLKEMLELRYLCLPWFMHDKTKLELGDLVNLEHLWYFSTQHSSVTDLLRMTKLRGLSVSLSERYTFEALLSSLRQLRNLETLYLDFRYKTYTVDYVGELDLDFIHLKELGLTVRMSKIPDQHQFPPHLEHIYLYYCGIEEDPMPILEKLLHLKSVELSSEAF |
List of Contributions
There has not been any contribution yet.
