PRGDB00062155 (verticillium wilt disease resistance protein Ve2)

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verticillium wilt disease resistance protein Ve2
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 14269076 (AF365929)
Gene Class Unknown
Domain Type LRR
Gene Species Solanum lycopersicum

Comment?

Lycopersicon esculentum verticillium wilt disease resistance protein Ve2 (Ve2) gene, complete cds.

DNA Sequence

ATGAGATTTTTACACTTTCTATGGATCTTCTTCATCATACCCTTTTTGCAAATTTTATTAGGTAATGAGATTTTATTGGTTTCCTCTCAATGTCTTGATGATCAAAAGTCATTGTTGCTGCAGTTGAAGGGCAGCTTCCAATATGATTCTACTTTGTCAAATAAATTGGCAAGATGGAACCACAACACAAGTGAATGTTGTAACTGGAATGGGGTTACATGTGACCTCTCTGGTCATGTGATTGCCTTGGAACTGGATGATGAGAAAATTTCTAGTGGAATTGAGAATGCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAAGTTCAATGTTGGCATACCAGTTGGTATAGGCAACCTCACCAACTTGACGTACCTGAATTTATCCAATGCCGGTTTTGTTGGCCAAATTCCTATGATGTTATCAAGGTTAACAAGGCTAGTTACTCTTGATCTCTCAACTCTTTTCCCTGACTTTGCCCAGCCACTAAAACTAGAGAATCCCAATTTGAGTCATTTCATTGAGAACTCAACAGAGCTTAGAGAGCTTTACCTTGATGGGGTTGATCTCTCAGCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTAACTTGACTGTCTTGAGCTTGCGTACTTGTCGAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCACTTTCTCTCTTTCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCTGAATACTTTGCCAATTTCTCAAACTTGACTACCTTGACCCTCTCCTCTTGTAATCTGCAAGGAACATTTCCTAAAAGAATCTTTCAGGTACCAGTCTTAGAGTTTTTGGACTTGTCAACTAACAAATTGCTTAGTGGTAGTATTCCGATTTTTCCTCAAATTGGATCATTGAGGACGATATCACTAAGCTACACCAAGTTTTCTGGTTCATTACCAGACACCATTTCGAACCTTCAAAACCTATCCAGGTTAGAACTCTCCAACTGCAATTTCAGTGAACCAATACCTTCCACAATGGCGAACCTTACCAATCTTGTTTATTTAGATTTCTCCTTCAACAATTTCACTGGTTCCCTCCCATATTTCCAAGGGGCCAAGAAACTCATCTACTTGGACCTTTCACGTAATGGTCTAACTGGTCTCTTGTCTAGAGCTCATTTTGAAGGACTCTCAGAACTTGTCTACATTAATTTAGGGAACAATTCACTCAACGGGAGCCTTCCTGCATATATATTTGAGCTCCCCTCGTTGAAGCAGCTTTTTCTTTACAGCAATCAATTTGTTGGCCAAGTCGACGAATTTCGCAATGCATCCTCCTCTCCGTTGGATACAGTTGACTTGAGAAACAACCACCTGAATGGATCGATTCCCAAGTCCATGTTTGAAGTTGGGAGGCTTAAGGTCCTCTCACTTTCTTCCAACTTCTTTAGAGGGACAGTTCCCCTTGACCTCATTGGGAGGCTGAGCAACCTTTCAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCAGCAATTCAACCTCTTTCACATTTCCCCAGTTGAACATATTGAAATTAGCGTCTTGTCGGCTGCAAAAGTTCCCCGATCTCAAGAATCAGTCAAGGATGATGCACTTAGACCTTTCAGACAACCAAATATTGGGGGCAATACCAAATTGGATCTGGGGAATTGGTGGTGGAGGTCTCGCCCACCTGAATCTTTCATTCAATCAGCTGGAGTACGTGGAACAGCCTTACACTGTTTCCAGCAATCTTGTAGTCCTTGATTTGCATTCCAACCGTTTAAAAGGTGACTTACTAATACCACCTTCCACTGCCATCTATGTGGACTACTCGAGCAATAATTTAAACAATTCCATCCCAACAGATATTGGAAGATCTCTTGGTTTTGCCTCCTTTTTCTCGGTAGCAAACAATAGCATCACTGGAATAATTCCTGAATCCATATGCAACGTCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATACCACCATGTCTACTGGAATATAGTCCAAAACTTGGAGTGCTGAATCTAGGGAACAATAGACTCCATGGTGTTATACCAGATTCATTTCCAATTGGTTGTGCTCTAATAACTTTAGACCTCAGCAGGAATATCTTTGAAGGGAAGCTACCAAAATCGCTTGTCAACTGCACGTTGTTGGAGGTCCTGAATGTTGGAAATAACAGTCTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAACCAGCCTGAAGGTCCTAGTCTTGCGCTCCAATAAATTCAATGGAAATCTTACGTGTAATATAACCAAACATAGCTGGAAGAATCTCCAGATCATAGATATAGCTTCCAACAATTTTACTGGTATGTTGAATGCAGAATGCTTTACAAATTGGAGAGGAATGATGGTTGCAAAAGATTACGTGGAGACAGGACGCAATCATATCCAGTATGAGTTCTTACAACTAAGTAACTTGTACTATCAGGATACAGTGACATTAATCATCAAAGGCATGGAGCTGGAGCTTGTGAAGATTCTTAGGGTCTTCACATCTATTGATTTCTCTTCCAATAGATTTCAAGGAAAGATACCAGATACTGTTGGGGATCTTAGCTCACTTTATGTTTTGAACCTGTCACACAATGCCCTCGAGGGACCAATTCCAAAATCAATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAAGAAACCACCTGTCCGGGGAGATCCCCTCAGAGCTTTCAAGTCTCACATTCTTAGCAGTTTTGAACTTATCGTTCAACAATTTGTTTGGAAAAATCCCGCAAAGTAATCAATTTGAAACATTCTCAGCAGAATCCTTTGAAGGAAACAGAGGCCTATGCGGGCTCCCTCTTAACGTCATTTGCAAAAGCGATACTTCAGAGTTGAAACCAGCACCAAGTTCTCAAGATGACTCTTATGATTGGCAGTTCATATTTACGGGTGTGGGATATGGAGTAGGGGCAGCAATCTCCATTGCACCTCTGTTGTTTTACAAGCAAGGAAACAAATACTTTGACAAACATTTGGAGAGAATGCTTAAACTGATGTTTCCTAGATACTGGTTCAGTTACACCAGATTTGACCCTGGGAAGGTTGTGGCTGTGGAACACTATGAAGATGAGACCCCAGATGACACCGAAGATGACGATGAGGGTGGAAAAGAAGCATCTCTTGGGCGTTATTGTGTCTTCTGTAGTAAACTTGATTTTCAGAAAAATGAAGCAATGCATGATCCAAAATGCACTTGTCATATGTCATCATCCCCCAATTCTTTTCCTCCTACGCCGTCCTTTTTTTCACCTTTATTAGTCATATATCACAAAAAGTTTTGA


Protein sequences

Name Description Sequence
verticillium wilt disease resistance protein Ve2 verticillium wilt disease resistance protein Ve2 [Solanum lycopersicum].

MRFLHFLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQGNKYFDKHLERMLKLMFPRYWFSYTRFDPGKVVAVEHYEDETPDDTEDDDEGGKEASLGRYCVFCSKLDFQKNEAMHDPKCTCHMSSSPNSFPPTPSFFSPLLVIYHKKF

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420:SF473
6-1029 PTHR24420:SF473,SUBFAMILY NOT NAMED

FLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQ

HMMPanther: PTHR24420
6-1029 PTHR24420,FAMILY NOT NAMED

FLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQ

superfamily: SSF52058
29-200 SSF52058,LRR

SQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQ

Gene3D: G3DSA:3.80.10.10
30-303 G3DSA:3.80.10.10

QCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIP

HMMPfam: PF08263
IPR013210
33-75 LRRNT_2
Leucine-rich repeat-containing N-terminal, type 2

DDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD

superfamily: SSF52047
176-441 SSF52047,LRR

NLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQF

HMMPfam: PF13855
239-297 LRR_8,Leucine rich repeat

LSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKL

Gene3D: G3DSA:3.80.10.10
305-519 G3DSA:3.80.10.10

FPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDA

HMMPfam: PF13855
310-369 LRR_8,Leucine rich repeat

SLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNF

HMMPfam: PF13855
381-440 LRR_8,Leucine rich repeat

KLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQ

FPrintScan: PR00019
382-395 LEURICHRPT,Leucine-rich repeat signature

LIYLDLSRNGLTGL

superfamily: SSF52058
401-616 SSF52058,LRR

FEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGD

Gene3D: G3DSA:3.80.10.10
527-716 G3DSA:3.80.10.10

FTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSF

superfamily: SSF52058
622-984 SSF52058,LRR

STAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVIC

HMMPfam: PF13855
654-708 LRR_8,Leucine rich repeat

VANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRL

Gene3D: G3DSA:3.80.10.10
722-980 G3DSA:3.80.10.10

LITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPL

HMMPfam: PF13855
871-927 LRR_8,Leucine rich repeat

SIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHL

FPrintScan: PR00019
914-927 LEURICHRPT,Leucine-rich repeat signature

LQMLESLDLSRNHL


List of References

L M Kawchuk, J Hachey, D R Lynch, F Kulcsar, G van Rooijen, D R Waterer, A Robertson, E Kokko, R Byers, R J Howard, R Fischer, D Prufer
Tomato Ve disease resistance genes encode cell surface-like receptors.
Proc. Natl. Acad. Sci. U.S.A.: 2001, 98(11);6511-5
PubMed:11331751 WorldCat.org DOI (P p)





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Analyses

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