PRGDB00062156 (disease resistance protein homolog)
| disease resistance protein homolog | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 13924640 (AF258292) |
| Gene Class | T |
| Domain Type | TIR, LRR |
| Gene Species | Brassica oleracea |
DNA Sequence
AGGAAGAGTGTGGTCAAATGGTGATACCTGTTTTCTACCGTTTGGATCCTTCCCATGTGAGGAATCAAACCGGTGAATTTGGTAAAATCTTTGAAAAGACATGCCACGACGAAACAGAGGAAGTGAAGATAAGATGGAGTGAGGCTTTGACCAATGTAGCTAATATCCTTGGATATCATTCTGTCATATGGGGTAACGAAGCAGACATGGTTGAAAAAATTGCTAATGATGTTATAGAGAAACTACTTTTAACTCCAGCAAAGGATTCTGAGGACTTTGTCGGCATCGAAGATCATATTGCAAAATTGAGTATGTTGTTGCAGTTGGAAGCAGAGGAAGTGATGATGGTTGGTTTATGGGGTTCTTCCGGGATTGGAAAGACTACTATTGCAAGAGTTTTATTCAAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein homolog | disease resistance protein homolog [Brassica oleracea]. | EECGQMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANILGYHSVIWGNEADMVEKIANDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVMMVGLWGSSGIGKTTIARVLFN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
1-58 | TIR Toll-Interleukin receptor
|
EECGQMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANILGY |
| ProfileScan: PS50104 IPR000157
|
1-55 | TIR Toll-Interleukin receptor
|
EECGQMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANI |
| Gene3D: G3DSA:3.40.50.10140 | 2-56 | G3DSA:3.40.50.10140 | ECGQMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANIL |
| HMMPfam: PF01582 IPR000157
|
4-50 | TIR Toll-Interleukin receptor
|
GQMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALT |
| HMMPanther: PTHR23155:SF292 | 5-135 | PTHR23155:SF292,SUBFAMILY NOT NAMED | QMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANILGYHSVIWGNEADMVEKIANDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVMMVGLWGSSGIGKTTIARVLFN |
| HMMPanther: PTHR23155 | 5-135 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | QMVIPVFYRLDPSHVRNQTGEFGKIFEKTCHDETEEVKIRWSEALTNVANILGYHSVIWGNEADMVEKIANDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVMMVGLWGSSGIGKTTIARVLFN |
| superfamily: SSF52540 | 64-135 | SSF52540 | GNEADMVEKIANDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVMMVGLWGSSGIGKTTIARVLFN |
| Gene3D: G3DSA:3.40.50.300 | 84-135 | G3DSA:3.40.50.300 | TPAKDSEDFVGIEDHIAKLSMLLQLEAEEVMMVGLWGSSGIGKTTIARVLFN |
List of Contributions
There has not been any contribution yet.
