PRGDB00062157 (disease resistance protein homolog)
| disease resistance protein homolog | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 13924637 (AF258291) |
| Gene Class | T |
| Domain Type | TIR, LRR |
| Gene Species | Brassica rapa |
DNA Sequence
CAGGAAGAGTGTGGTCAAATGGTGATACCTGTTTTCTACCGTTTAGATCCTTCCCATGTGAGGAAACAAACCGGTGAATTTGGTAAAATCTTTGAAAAGACATGCCACGACGAAACAGAGGAAGTGAAGATAAGATGGAGTGAAGCTTTGACCGATGTAGCTAATATCCTTGGATATCATTCTGTCATATGGGGTAACGAAGCAGACATGGTTGAAAAAATTGTCAATGATGTTATAGAGAAACTACTTTTAACTCCAGCAAAGGATTCTGAGGACTTTGTCGGCATCGAAGATCATATTGCAAAATTGAGTATGTTGTTGCAGTTGGAAGCAGAGGAAGTGAGGATGGTTGGTTTATGGGGTTCTTCCGGGATTGGAAAGACTACTATTGCAAGAGTTTTATTCAAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein homolog | disease resistance protein homolog [Brassica rapa]. | QEECGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANILGYHSVIWGNEADMVEKIVNDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50104 IPR000157
|
1-56 | TIR Toll-Interleukin receptor
|
QEECGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANI |
| superfamily: SSF52200 IPR000157
|
2-59 | TIR Toll-Interleukin receptor
|
EECGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANILGY |
| Gene3D: G3DSA:3.40.50.10140 | 3-57 | G3DSA:3.40.50.10140 | ECGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANIL |
| HMMPfam: PF01582 IPR000157
|
4-51 | TIR Toll-Interleukin receptor
|
CGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALT |
| HMMPanther: PTHR23155:SF292 | 6-136 | PTHR23155:SF292,SUBFAMILY NOT NAMED | QMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANILGYHSVIWGNEADMVEKIVNDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFN |
| HMMPanther: PTHR23155 | 6-136 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | QMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANILGYHSVIWGNEADMVEKIVNDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFN |
| superfamily: SSF52540 | 76-136 | SSF52540 | NDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFN |
| Gene3D: G3DSA:3.40.50.300 | 85-136 | G3DSA:3.40.50.300 | TPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFN |
List of Contributions
There has not been any contribution yet.
