PRGDB00062182 (putative NBS-LRR type disease resistance protein)

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putative NBS-LRR type disease resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 5817344 (AF123700)
Gene Class NL
Domain Type NBS, LRR
Gene Species Pisum sativum

Comment?

Pisum sativum putative NBS-LRR type disease resistance protein (RGA2.75) gene, partial cds.

DNA Sequence

CACAGCAAAAGCCATCTATAATCAAATCCATCGCAAATTTGAAGATAGAAGCTTCATTGAAAATATTAGAGAAGTCTGCGAAAAAGACAATGACGGGATTATCCGTTTACAAGAACAACTACTTTCAGATGTCTTAAAGGTAAAGGTCAAGAAGATACATAGTATAACATCAGGGACTACTATGATAGAGAAAAGACTCGTGAGGAAAAAGGTTCTCGTTGTACTAGATGACGTGAGTACATTTGAGCAAATAAAAGCCCTGTGTGGAAATCGTAAATGGTTTGCTTCCGGAAGTGTATTAATCGTCACAACCAGAGATGTACACCTACTTAAATTACTTAAAGTCGCACATGTTTGTACAATGAAGGAAATGGATGAAGATGATTCCCTTGAGCTTTTCTGTTGGCATGCTTTTAGAGAACCAATTCCGAGAAAATACTTTGGTAAACTCTCTAGAAATGTTGTTGCTTACTGTGGA


Protein sequences

Name Description Sequence
putative NBS-LRR type disease resistance protein putative NBS-LRR type disease resistance protein [Pisum sativum].

TAKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

putative NBS-LRR type disease resistance protein putative NBS-LRR type disease resistance protein [Pisum sativum].

TAKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

Domains

Domain Start-End Description Sequence

superfamily: SSF52540
1-159 SSF52540

TAKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

superfamily: SSF52540
1-159 SSF52540

TAKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

HMMPfam: PF00931
IPR002182
2-158 NB-ARC,NBS
NB-ARC

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYC

HMMPanther: PTHR11017:SF20
2-159 PTHR11017:SF20,SUBFAMILY NOT NAMED

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

HMMPanther: PTHR11017
2-159 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

HMMPfam: PF00931
IPR002182
2-158 NB-ARC,NBS
NB-ARC

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYC

HMMPanther: PTHR11017:SF20
2-159 PTHR11017:SF20,SUBFAMILY NOT NAMED

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG

HMMPanther: PTHR11017
2-159 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

AKAIYNQIHRKFEDRSFIENIREVCEKDNDGIIRLQEQLLSDVLKVKVKKIHSITSGTTMIEKRLVRKKVLVVLDDVSTFEQIKALCGNRKWFASGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDDSLELFCWHAFREPIPRKYFGKLSRNVVAYCG






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Analyses

Blast

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