PRGDB00062183 (putative NBS-LRR type disease resistance protein)

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putative NBS-LRR type disease resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 5817342 (AF123699)
Gene Class NL
Domain Type NBS, LRR
Gene Species Pisum sativum

Comment?

Pisum sativum putative NBS-LRR type disease resistance protein (RGA2.65) gene, partial cds.

DNA Sequence

CATTGCGAAAGCCATCTACAATGAAATTGGCCGCAATTTTGAAGGTAGAAGTTTCCTAGCAAATATTAGGGAAGTTTGGGAGCAAAATGTTGGTCAAGTGAATTTACAAGAACAACTTCTCTTTGATATCTGCAAAGAAATGACAACCAAAATACAAAGCATTGACAATGGAAAAATCATATTAAAGGAAAGACTCTGCCATAAAAGAATACTAATTGTACTTGATGATGTTAATACATTGGACCAACTCAATGCTCTGTGTGGAAGTCATAAATGGTTTGGTTCGGGGAGTAGAGTAATTATCACAACAAGAGATAGACATATACTTCGTGGGAATAGGGTTGACCAAGTATATGAAATGAGGAATATGGATGAAAAGGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTACAGAAGATTTTGTTGGAATTTCCAAAAATGTAGTTGAGTATTCTGGG


Protein sequences

Name Description Sequence
putative NBS-LRR type disease resistance protein putative NBS-LRR type disease resistance protein [Pisum sativum].

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG

putative NBS-LRR type disease resistance protein putative NBS-LRR type disease resistance protein [Pisum sativum].

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG

Domains

Domain Start-End Description Sequence

Gene3D: G3DSA:3.40.50.300
1-136 G3DSA:3.40.50.300

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHA

HMMPfam: PF00931
IPR002182
1-156 NB-ARC,NBS
NB-ARC

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEY

superfamily: SSF52540
1-142 SSF52540

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASP

HMMPanther: PTHR11017:SF20
1-158 PTHR11017:SF20,SUBFAMILY NOT NAMED

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG

HMMPanther: PTHR11017
1-158 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG

Gene3D: G3DSA:3.40.50.300
1-136 G3DSA:3.40.50.300

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHA

HMMPfam: PF00931
IPR002182
1-156 NB-ARC,NBS
NB-ARC

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEY

superfamily: SSF52540
1-142 SSF52540

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASP

HMMPanther: PTHR11017:SF20
1-158 PTHR11017:SF20,SUBFAMILY NOT NAMED

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG

HMMPanther: PTHR11017
1-158 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

IAKAIYNEIGRNFEGRSFLANIREVWEQNVGQVNLQEQLLFDICKEMTTKIQSIDNGKIILKERLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRVIITTRDRHILRGNRVDQVYEMRNMDEKESIELFSWHAFKQASPTEDFVGISKNVVEYSG






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Analyses

Blast

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