PRGDB00062221 (Disease resistance protein RPH8A, putative)
| Disease resistance protein RPH8A, putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 255574443 (XM_002528088) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Ricinus communis |
DNA Sequence
ATGGCAGCAGCAGATGGTGCAGTGAGTTTCCTTCTCCAAAAATTCGATACCCTCATAGCTAGAGAATGGAACCTTTTCAGTGGGATAAAAACTGAAGTTGGTGGATTGAAAAATGAGTTTGAGATGATGAGAGCAATCCTGAAAGAAGCTGATGATGCAAAAAGAGAAAGCAACGAACAAGTGAGAGTTTGGATAAAACAAGTGAGGGATTTAGCTTATGACATAGAGGATATTCTTGACATGTATGCTTTCCACACTTGTCAACATTCTTCTTCTTCTTCTTCTTCTTCCTCTAGCATTTACCCTAAATTCCTTCGATGGAAAAGAAGCCGTTCAATTTCCGTTTTGGTTCAAGATATGAAGAATAAACTCTCAGGAGTCAAAGAAATGAGAGAAAGGTACCAACTTATTGCAAGTTCACCTCAAGCCTCAAGTTCATGTCAAGAAAATTACAAACATTTTCAGTATCCTAGAGTGGCTTCTCTGTACACTGATGAAGCTGACATTGTAGGCATTGAAGAACCAAGGGATAAATTGATGGCATGGGCAGTTAATGGAGAATCTAGTCTGAAGGTTGTCTTCTTGGTTGGAATGGCTGGATTGGGAAAGACACTTGTCGCCAAAAAGGTATATGAAGGAACAAAGAAAAGCTTTGATTGTTGTGCCTGGATTCCAATTTCAGTGTCTCAAAAGAAAGAGGAGTTGCTGTGGACAATACTGAAGCGGCTTTTTGAATCTAATGACGAGCCAATACCTCGAGAGTATTACACCATCAGTATAGTTCAATTAATGGACAAAATGAGAAGTTTTCTTCAACACAGAAGGTACATAGTTGTTTTTGATGATTTATGGGACAAAGATGTATGGGAATTCATAAAATATGCTTTGCCAAACCGAATCCATAGTCGAGTGATTATCACTACGCGGAGAGGTGATATTGCTCACTTTTATCATCATGATTCTGTTGGTGTCTATAACCTTCAGCCTTTGCCTCTGGAAAAGGCTCAAGAATTGTTCTACAACAAGACTTTCCAATCCAGTGGTGTATGCCCTTCAGGTCTGATTGAGTGGTCAGGGAAGTTCCTCAAGCAGTGTGAAGGATTGCCTCTCGGAATTGTTGCTATAAGCAATCTTTTGGCGAATACTGAGAAAACAGCAGATGCATGGAGGAAACTACATGACAGCCTTGGATCAGAACTGGACAGCAATGGTCATCTTTCAAGCGTCACGAATGTAATATCGCCAAGTTATGATGATCTGCCATATTCTCTCAAGTATTGTTTATTGTACTTCAGTATCTTTCCTGAAGAATACTCAATTAAGCGAAGAAAATTGATTCGTTTGTGGATATCTGAGGGGCTTGTCAAAGAAGTGATGGGAAAAACACTTGAAGAGGTGGGGGAAGACTACCTTAAAGAGCTTATTCAAAGAAGCCTTATTGTCACTAATGAAGTCGATTTTGACGGACAGCCAAAAACTTGTCGTGTTCATCATCTCCTGCATAAAATCATCTTCGCCAAGTCCCAAGAGGAAAATTTCTGTGGCATTTACATACAACCTGGTGCATATTTGAATGAGAAAGTTCGTCGACTATCCATCCAGCGAAGTTGCACAAATATGCTGCATATGAACTATGCTCATTGTCGCTCATTCTTCATGTCTGGGATACTTCGCCATCTGCTTGTATATCGCTACAACCTGAAGAGTTATGTTACTATTGACTGTGCACAAGGATTCAAGGTCTGTAATGGGATTAGGAGACTAGTAGCATTACAAAAGTTGTCACTGATAAAGGCAAATGGAGATAATGGTATAATAAGTGAACTAGAGAATCTGACACAGCTGCGGAAATTGGGGGTCACCGGCTTAAAAGAACAAGATGGTGGGTACTTATGTCGCTCAATTATGAATATGAAAAATCTCCAATCACTAGATTTAGCATCAATTCATGAAAATGAATATCTTGATCTAAGTTTAATTCATGATCCTCCTATGCTCCTACAACGCCTTTACCTGAAAGGTCAGTTGCGGAACATACCGGATTGGATATGTTCTCTACACGACCTTGTCAGGATACGTTTAAAATGGTCAAAGTTGGATTGCAGCCCCATTGATGCCCTCCAAGATCGTCCAAATCTGGTAGAACTGCAGTTGCTTGATGCATATACTGGAAAAAAATTGGTGTTTTATGCTAGAAAATTTCCAAGTCTGAAGATACTAGAGCTAGAAAAAATGGAGGCACTTGAGGAAGTAAGAATTCGGAAAGGTAGCTTAGATAACCTTGAAAAGTTAATTATAAGGCGATGTGAAAAGATAAAGATTGTGCTTCAAGGGATTGATAGACTTCCTCACCTGAAGGAGTTGCATTTATATGAGATGCCAGATAAATTTCTGAATGGGATTGAAAAGAATGGTGGGAAATTTCGTCAGCTTGTCCAGCATATTCCTGTCATTTATTCTTTTACTCTTGACACAAATGGGTACTGGAAGCCTAGAGATCTTTCATAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein RPH8A, putative | Disease resistance protein RPH8A, putative [Ricinus communis]. | MAAADGAVSFLLQKFDTLIAREWNLFSGIKTEVGGLKNEFEMMRAILKEADDAKRESNEQVRVWIKQVRDLAYDIEDILDMYAFHTCQHSSSSSSSSSSIYPKFLRWKRSRSISVLVQDMKNKLSGVKEMRERYQLIASSPQASSSCQENYKHFQYPRVASLYTDEADIVGIEEPRDKLMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFYHHDSVGVYNLQPLPLEKAQELFYNKTFQSSGVCPSGLIEWSGKFLKQCEGLPLGIVAISNLLANTEKTADAWRKLHDSLGSELDSNGHLSSVTNVISPSYDDLPYSLKYCLLYFSIFPEEYSIKRRKLIRLWISEGLVKEVMGKTLEEVGEDYLKELIQRSLIVTNEVDFDGQPKTCRVHHLLHKIIFAKSQEENFCGIYIQPGAYLNEKVRRLSIQRSCTNMLHMNYAHCRSFFMSGILRHLLVYRYNLKSYVTIDCAQGFKVCNGIRRLVALQKLSLIKANGDNGIISELENLTQLRKLGVTGLKEQDGGYLCRSIMNMKNLQSLDLASIHENEYLDLSLIHDPPMLLQRLYLKGQLRNIPDWICSLHDLVRIRLKWSKLDCSPIDALQDRPNLVELQLLDAYTGKKLVFYARKFPSLKILELEKMEALEEVRIRKGSLDNLEKLIIRRCEKIKIVLQGIDRLPHLKELHLYEMPDKFLNGIEKNGGKFRQLVQHIPVIYSFTLDTNGYWKPRDLS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF121 | 4-834 | PTHR23155:SF121,SUBFAMILY NOT NAMED | ADGAVSFLLQKFDTLIAREWNLFSGIKTEVGGLKNEFEMMRAILKEADDAKRESNEQVRVWIKQVRDLAYDIEDILDMYAFHTCQHSSSSSSSSSSIYPKFLRWKRSRSISVLVQDMKNKLSGVKEMRERYQLIASSPQASSSCQENYKHFQYPRVASLYTDEADIVGIEEPRDKLMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFYHHDSVGVYNLQPLPLEKAQELFYNKTFQSSGVCPSGLIEWSGKFLKQCEGLPLGIVAISNLLANTEKTADAWRKLHDSLGSELDSNGHLSSVTNVISPSYDDLPYSLKYCLLYFSIFPEEYSIKRRKLIRLWISEGLVKEVMGKTLEEVGEDYLKELIQRSLIVTNEVDFDGQPKTCRVHHLLHKIIFAKSQEENFCGIYIQPGAYLNEKVRRLSIQRSCTNMLHMNYAHCRSFFMSGILRHLLVYRYNLKSYVTIDCAQGFKVCNGIRRLVALQKLSLIKANGDNGIISELENLTQLRKLGVTGLKEQDGGYLCRSIMNMKNLQSLDLASIHENEYLDLSLIHDPPMLLQRLYLKGQLRNIPDWICSLHDLVRIRLKWSKLDCSPIDALQDRPNLVELQLLDAYTGKKLVFYARKFPSLKILELEKMEALEEVRIRKGSLDNLEKLIIRRCEKIKIVLQGIDRLPHLKELHLYEMPDKFLNGIEKNGGKFRQLVQHIPVIYSFTLDTNGYWKPRDL |
| HMMPanther: PTHR23155 | 4-834 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | ADGAVSFLLQKFDTLIAREWNLFSGIKTEVGGLKNEFEMMRAILKEADDAKRESNEQVRVWIKQVRDLAYDIEDILDMYAFHTCQHSSSSSSSSSSIYPKFLRWKRSRSISVLVQDMKNKLSGVKEMRERYQLIASSPQASSSCQENYKHFQYPRVASLYTDEADIVGIEEPRDKLMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFYHHDSVGVYNLQPLPLEKAQELFYNKTFQSSGVCPSGLIEWSGKFLKQCEGLPLGIVAISNLLANTEKTADAWRKLHDSLGSELDSNGHLSSVTNVISPSYDDLPYSLKYCLLYFSIFPEEYSIKRRKLIRLWISEGLVKEVMGKTLEEVGEDYLKELIQRSLIVTNEVDFDGQPKTCRVHHLLHKIIFAKSQEENFCGIYIQPGAYLNEKVRRLSIQRSCTNMLHMNYAHCRSFFMSGILRHLLVYRYNLKSYVTIDCAQGFKVCNGIRRLVALQKLSLIKANGDNGIISELENLTQLRKLGVTGLKEQDGGYLCRSIMNMKNLQSLDLASIHENEYLDLSLIHDPPMLLQRLYLKGQLRNIPDWICSLHDLVRIRLKWSKLDCSPIDALQDRPNLVELQLLDAYTGKKLVFYARKFPSLKILELEKMEALEEVRIRKGSLDNLEKLIIRRCEKIKIVLQGIDRLPHLKELHLYEMPDKFLNGIEKNGGKFRQLVQHIPVIYSFTLDTNGYWKPRDL |
| superfamily: SSF52540 | 152-403 | SSF52540 | KHFQYPRVASLYTDEADIVGIEEPRDKLMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFYHHDSVGVYNLQPLPLEKAQELFYNKTFQSSGVCPSGLIEWSGKFLKQCEGLPLGIVAISNLLANTEKTADAWRKLHDSLGSELDSN |
| HMMPfam: PF00931 IPR002182
|
177-457 | NB-ARC,NBS NB-ARC
|
DKLMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFYHHDSVGVYNLQPLPLEKAQELFYNKTFQSSGVCPSGLIEWSGKFLKQCEGLPLGIVAISNLLANTEKTADAWRKLHDSLGSELDSNGHLSSVTNVISPSYDDLPYSLKYCLLYFSIFPEEYSIKRRKLIRLWISEGLVKE |
| Gene3D: G3DSA:3.40.50.300 | 179-317 | G3DSA:3.40.50.300 | LMAWAVNGESSLKVVFLVGMAGLGKTLVAKKVYEGTKKSFDCCAWIPISVSQKKEELLWTILKRLFESNDEPIPREYYTISIVQLMDKMRSFLQHRRYIVVFDDLWDKDVWEFIKYALPNRIHSRVIITTRRGDIAHFY |
| FPrintScan: PR00364 IPR000767
|
192-207 | DISEASERSIST Disease resistance protein
|
VVFLVGMAGLGKTLVA |
| FPrintScan: PR00364 IPR000767
|
270-284 | DISEASERSIST Disease resistance protein
|
FLQHRRYIVVFDDLW |
| FPrintScan: PR00364 IPR000767
|
365-379 | DISEASERSIST Disease resistance protein
|
CEGLPLGIVAISNLL |
| superfamily: SSF52058 | 495-794 | SSF52058,LRR | RVHHLLHKIIFAKSQEENFCGIYIQPGAYLNEKVRRLSIQRSCTNMLHMNYAHCRSFFMSGILRHLLVYRYNLKSYVTIDCAQGFKVCNGIRRLVALQKLSLIKANGDNGIISELENLTQLRKLGVTGLKEQDGGYLCRSIMNMKNLQSLDLASIHENEYLDLSLIHDPPMLLQRLYLKGQLRNIPDWICSLHDLVRIRLKWSKLDCSPIDALQDRPNLVELQLLDAYTGKKLVFYARKFPSLKILELEKMEALEEVRIRKGSLDNLEKLIIRRCEKIKIVLQGIDRLPHLKELHLYEMP |
| Gene3D: G3DSA:3.80.10.10 | 584-792 | G3DSA:3.80.10.10 | GIRRLVALQKLSLIKANGDNGIISELENLTQLRKLGVTGLKEQDGGYLCRSIMNMKNLQSLDLASIHENEYLDLSLIHDPPMLLQRLYLKGQLRNIPDWICSLHDLVRIRLKWSKLDCSPIDALQDRPNLVELQLLDAYTGKKLVFYARKFPSLKILELEKMEALEEVRIRKGSLDNLEKLIIRRCEKIKIVLQGIDRLPHLKELHLYE |
| FPrintScan: PR00364 IPR000767
|
732-748 | DISEASERSIST Disease resistance protein
|
RKFPSLKILELEKMEAL |
List of Contributions
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