PRGDB00062347 (E3 ligase)
| E3 ligase | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 324029072 (HQ123582) |
| Gene Class | N |
| Domain Type | NBS |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGCCACCGTGGGGCAGCCTGATGCCATGAGAAGGATCACCGTTCACTACGTGAATCCGCCGCCGATCGCCGGCGCCGGAGAAGCACACGTCGATGGCCTCGACGACGAGGTTCTTGATTATGTGATTGGTGATGTTCTTCAGGATCAGGAGGGTCTGTATCAATCGATATTGTATGGCAAATACGGGGATGACATGAGAGGGGCAAGAAACACTGCTCTTGCCCAATCTGATGGTTTACATTACTACTATCACGGAGAGAACAGCAGTGGTGAAGCAACAACCTCGAGAAATTCAGAAATCGACCAACAGATTGAGTATGACTTGGTGTTCGCTAGGCAGCTGCAGGCAATGGATAATCTGACAATTGAGACACCTGCAGATGAAGATGATGATATAAGCTGCGTACCCTCTCCATCTGACTCTGAAACCGATGAACCGGCAGAAGGCAACAACGAAGAGGCTGCCACACAGGATGATAACGATGATCCAGACAACATGACATACGAGCAAAGGCAGGCACTTGTGGAATCTGTAGGAAATGAGAACAGAGGTTTATCTGATCTGCTTATCTCCTACTTGGAGACATGGAAGTACAAATCAGGCTTTTTCCCAAGGAAGGCAAACCATGATAACTGTCCTATATGTCTATCCGCTTTCAGACGCCGAGAAACACTCATTACATTGGCTTGCAAGCATAGTTACCATGAAGGTTGTATTGCTAGATGGCTCAAGATTGACAAGGCCTGCCCAGTTTGCAAATATGAAGTGTTTGGACCTTCCTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| E3 ligase | E3 ligase [Oryza sativa Japonica Group]. | MATVGQPDAMRRITVHYVNPPPIAGAGEAHVDGLDDEVLDYVIGDVLQDQEGLYQSILYGKYGDDMRGARNTALAQSDGLHYYYHGENSSGEATTSRNSEIDQQIEYDLVFARQLQAMDNLTIETPADEDDDISCVPSPSDSETDEPAEGNNEEAATQDDNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFGPS |
| E3 ligase | E3 ligase [Oryza sativa Japonica Group]. | MATVGQPDAMRRITVHYVNPPPIAGAGEAHVDGLDDEVLDYVIGDVLQDQEGLYQSILYGKYGDDMRGARNTALAQSDGLHYYYHGENSSGEATTSRNSEIDQQIEYDLVFARQLQAMDNLTIETPADEDDDISCVPSPSDSETDEPAEGNNEEAATQDDNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFGPS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR14155:SF11 | 160-259 | OS03G0173900 PROTEIN,OS03G0173900 PROTEIN | DNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFG |
| HMMPanther: PTHR14155 | 160-259 | FAMILY NOT NAMED,RING FINGER PROTEIN 6/12/38 | DNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFG |
| HMMPanther: PTHR14155:SF11 | 160-259 | OS03G0173900 PROTEIN,OS03G0173900 PROTEIN | DNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFG |
| HMMPanther: PTHR14155 | 160-259 | FAMILY NOT NAMED,RING FINGER PROTEIN 6/12/38 | DNDDPDNMTYEQRQALVESVGNENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFG |
| superfamily: SSF57850 | 186-260 | RING/U-box,NBS | LSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFGP |
| superfamily: SSF57850 | 186-260 | RING/U-box,NBS | LSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEVFGP |
| Gene3D: G3DSA:3.30.40.10 IPR013083
|
209-257 | no description Zinc finger, RING/FYVE/PHD-type
|
NHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEV |
| Gene3D: G3DSA:3.30.40.10 IPR013083
|
209-257 | no description Zinc finger, RING/FYVE/PHD-type
|
NHDNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCKYEV |
| HMMPfam: PF13639 | 211-254 | zf-RING_2,Ring finger domain | DNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCK |
| HMMPfam: PF13639 | 211-254 | zf-RING_2,Ring finger domain | DNCPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCK |
| ProfileScan: PS50089 IPR001841
|
213-254 | ZF_RING_2 Zinc finger, RING-type
|
CPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCK |
| ProfileScan: PS50089 IPR001841
|
213-254 | ZF_RING_2 Zinc finger, RING-type
|
CPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVCK |
| HMMSmart: SM00184 IPR001841
|
213-253 | Ring finger Zinc finger, RING-type
|
CPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVC |
| HMMSmart: SM00184 IPR001841
|
213-253 | Ring finger Zinc finger, RING-type
|
CPICLSAFRRRETLITLACKHSYHEGCIARWLKIDKACPVC |
List of References
Wei Li, Sihui Zhong, Guojun Li, Qun Li, Bizeng Mao, Yiwen Deng, Huijuan Zhang, Longjun Zeng, Fengming Song, Zuhua He
Rice RING protein OsBBI1 with E3 ligase activity confers broad-spectrum resistance against Magnaporthe oryzae by modifying the cell wall defence.
Cell Res.: 2011, 21(5);835-48
PubMed:21221134
WorldCat.org
DOI
(I p)
Wei Li, Sihui Zhong, Guojun Li, Qun Li, Bizeng Mao, Yiwen Deng, Huijuan Zhang, Longjun Zeng, Fengming Song, Zuhua He
Rice RING protein OsBBI1 with E3 ligase activity confers broad-spectrum resistance against Magnaporthe oryzae by modifying the cell wall defence.
Cell Res.: 2011, 21(5);835-48
PubMed:21221134
WorldCat.org
DOI
(I p)
List of Contributions
There has not been any contribution yet.
